Pieris rapae (cabbage white): 110998919 Help Entry 110998919         CDS       T05162                                  Name (RefSeq) huntingtin   KO K04533   huntingtin Organism prap  Pieris rapae (cabbage white) Brite KEGG Orthology (KO) [BR:prap00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:prap03019]     110998919    04131 Membrane trafficking [BR:prap04131]     110998919    03029 Mitochondrial biogenesis [BR:prap03029]     110998919 Messenger RNA biogenesis [BR:prap03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      110998919 Membrane trafficking [BR:prap04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     110998919 Mitochondrial biogenesis [BR:prap03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     110998919 SSDB OrthologParalogGFIT Motif Pfam:  Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 Htt_C-HEAT HEAT HEAT_2 ARM_TBCD_2nd HEAT_GCN1 Motif Other DBs NCBI-GeneID:  110998919 NCBI-ProteinID:  XP_045486166 LinkDB All DBs Position 11:5467463..5498499 Genome browser AA seq 3014 aa AA seqDB search MNLLEKAEKSLEYLKNYEGVAKGHELQPAAGTLGRCLGALGARSNCARHYANLLSTAVPT LLSLASHESAEVRLVGDEALNRVIVGGFAFNAYKTNAILLNHIDANKNARWNRAAINRIC LGESWLRPGMGKIRSHAQALFPKLSQIIRSTTELQLVVEALESNLPRLLNALAEYSTDEE IYDLSRSLICRVECVEASVRRAISSCLGHLCVHRETLLTQILDKAFEKLWPMPVEDTTAI SWFSVIKAVFQINDVNKFTESDLFTVQDYLELYQLCICYIEASNSHNAQNAVLECLYVLL GLPGPHKRGLTASKPLSVSLDQRNARKGHRRNCSYTSAISFNVTQLPLESRETEFALTGA LQLGSVLRIGTPTSSIDDLNIQTPESPESEIDSEVDAVQLSRALSERFQRCDDTDDDDVA SREYVNKINIGRSNEDPRVLYCARLITSRFLLAGSRGEFVSDRSVRVSVKSSALSCLSAL LRLAPHLLTHYLDKDADLKLLNCSGSSEGTDSNQDNINEFILERNVCYQDSITESISQDL LKSSDSILTSKKDAKSLDKSLESELKSSKDVASNILDSKLVASGFSADTNMTISNLTSTT DGQSTGYPMTSSGVLSSSIDLDMKFDHFGDIEVKEEPIKERVVESESKSEEIEYQHMSEV LLLSDHNDPQVRGLVRNCVGSYLVAALHVAQGDYINWRSYTALPRDIADVLAVEKLVDLI LKGLHDEMHSVVSATLSTLTYLAPSLCHSIGSALAEIGTVADNSYWLCRLNLVQFYEKLP YQRLFMLCPAYKSHSEAILNTLFRLLADQDQKVRNAAAKAIANITPIIHPKPRTTPITML TETSRQMSRLFSSEDRRLSLERVREMYFYQDLPEQMKSGDILQDKDTLIVMVSDIMGRLM ASNCKNYTQGLLSTLREICQRWSPWHHSAYHGLGILAYCLARIECCPGTVPLHTTCLDIC RLVYPAEIHNIMRDKSNRDIFETQEVKEKWQHLENDRVASLSEKFLQVTLKMLNVLVHLI EEVNPNVHINKSGIALPGSPVRRKTQELTPRKSSLSSDTVDDKGLKKKPHVPPNSLKANF VGHFYTEPVYMKLYDNLRATYSNHKINLDAKGSIFYDFLSTTLKSLAIQLELSTEVEIGP ITEELLYYLKVIMPLCPENTVYCVTQLLKCLFGTNIINQYADFMSIANKEEKKEKSCFFD DVMLINNISFESESRRSSVCSNASQKFSEKNPRIIRERELLIALENFNKNRMERKWGNNK KELERYIRLFEPVVIQALKTYTVASATGVWSSVLCLLGRLLALRVNYCMLDTDQLFIGFL MKQLELLEHHEIPNCCDLVKSIMLFLVQLSSSKHHTKQIIEIPKLIQLCDGLMASGAQDE CIAGLEPVALKVFSNIGGSGIGTGGLGRAQQQEIQATREVLFYMLQKTMHLPKVLEVVSC VISLSQEQPENQYRWCELASDTLLHVLAERSAECEYAHALRSLEALLEIISKDVLLEQTR VEMLLKILFKAPPEQATTPRKLKLRYLSIILVLLRKVLVLIPESEILLSINYLKATCIAP QSIFFNVKPNIDPLNVQNVNETCANLSPDVILVRFLFKTLTYAMIELDDVTTGYEALSEH DELLYSVSVGLVVQVKHMLHLTNGCGFPLTAKSAQNLLHQEQSGLNTGLYSPEENIPLDD LNRRVLRARTALTMHWSHLLIRLNFLSHKYWQKLIGFSRSLPLSARATHYAHAHHADATQ LAVALAYCEYFVENGLGEVVHLSWLVGSRAHTLVSHCTEPLVAALLSALQRCSATSALLL HAIAARCQPCLQGEFALNTYKVLSSCHESQLGPLVFFICRIIGKLEPSIGARFSQLAIER CKDLRDMGEDGVKKQLSKEDVQVALELLQRDRAHQRYASLVSELNALASTVFDLSPLALA QERIVNPQTIRTTTIDQQWLLLQAKTGCCQRENSLPKVSRYNDLANLLSKLPLEDLTTIM SCPEFDRKIISVCFKVTCNTFVREFLSALSVNELKETEQETIRQQREMARSKEEMTASVD SNKLNVVNIHVFKKSDNKESKSQFFIPMTSIDNEVQESFGSLTITEEECEISVPELPKLY IASVSTLDKSLADILRLFPKQNRPLSQSENFSLNKEQTIDRYTRRCHQVFQDKLFYQEFM TIQTILSGYLKALDKIIAVIDETDCDLVEKCIENLLPSSLARNLAIFSVVSLQYMSFLIS NKKVVEAPVNAEVSFRANLPTDNICVDNVLRVTIKNVAKALNFEEIWCELNIDSNLNRVQ SAICCLYAVVKYLVKDRKPLISKSHILGDDGPKADIMITGNKLITLIEYWEENFYVKMEK LGKYEKVIESLIIRLARFEAVSTMSLIPPIAWASGEVKTRGPLELPLRALQDMDVLQSFL FRVNLIGWSSKKQFEEIWVGLVGALQGNGPHWAVRGISQLLVTAAPYVRGKGILHVPRVY LPWNDGMQRLRNILVGTSAYRIFEDINLERVPLQQDNIAGYQYAQFSTEYLKLASDLVDE AHYRVRREVKRKRKCTEIDVNSCVQLLMDVATDMLEPQAPTGLAARVALLSAITNTSSVF SSANIWRRAGTQLSALHAAQWPHAASAALHALAHCLPVLHAAAPGDTKQELTAVHEKLLK SLSASYAPLRQAALRGWLLQLPYAAASDTLPDLRQVVVRQLADPSRISVYEQSLYWAVLF SLAPDQTLLAANFLAANPHHYCAELVARGIISVLRRQVLPKDIKKTLVEKLLENMNKFSE EHAVQILLVHLFSADSKLLSSGRREVSDMDPDVLMSAMERITRLYASLRHVSRPDVQSIC GNALRHLLRETLPPAATLSRVLIELLDTCRMAEAIVPDPLSDRDVCVRAAIANCEVVFEV FQTSLSQSQLPVLSGWLFEALGQLVSGRVSPKLLPHVLLPLLVAASPLPLLRHTQSLALH VFHSGFYSQVKQDFGIFSDLFRSTNTMSFSERRLLCLVALHSQFTDQQLLRLRELCEDNE YLTDLRQCLLDVTS NT seq 9045 nt NT seq  +upstreamnt  +downstreamnt atgaatttactcgaaaaagccgagaaatcccttgaatatttgaaaaactatgaaggagtt gcaaaaggtcatgaattgcaacctgcagccggaacattgggtcgctgtctgggtgcgcta ggagctcgatccaattgcgctcgacactatgcaaatttattaagcacggctgtacccact ctactatcccttgccagccatgaaagcgcagaagtaaggttggtgggagatgaggcatta aatagagtcattgttggtgggtttgcttttaatgcatataagacaaatgctatcttgcta aatcatattgatgccaataagaatgcaagatggaatcgtgctgccatcaacagaatctgt cttggagagtcctggttacgcccaggtatgggaaaaataagatcccatgcacaagctttg ttcccaaaactgagtcaaattatcagaagcactactgagttgcagcttgtggtggaagct ttagaaagcaatttaccaagattactaaatgccttagctgaatatagtacagatgaagaa atctatgatctctctcgttctctaatatgccgtgtagaatgtgtggaagcatctgtccga cgcgcaataagctcttgccttggccatttatgtgtgcacagggagacacttcttacacag atactggataaagcttttgagaaattgtggccaatgccagttgaagacacaacagctatc agctggtttagtgtgatcaaagctgtatttcaaattaatgatgtcaataaatttactgaa agtgatctatttactgtacaggactatttggaattataccagctgtgtatatgttacata gaagcgtcaaactcgcataacgcgcaaaatgcagtactggagtgcctttatgtattactg gggctcccggggccgcataaacggggtctcactgcatccaaaccattatccgtatcatta gatcaacgtaacgcacgtaaaggacatcgccgtaattgcagttacacaagtgcgatatcc tttaatgtaacacaacttccattggaatcacgggaaacggaattcgccctaactggagct ctacaattgggaagtgttctgagaattggtacacctacatcgagtatagatgaccttaac atacagactccagaaagtccagagagtgagatagatagtgaggtggatgcggtgcagcta tcccgtgccttgtccgaacgattccaacgatgcgacgatactgatgatgacgatgttgct agtagagaatatgttaataagattaatataggccgatcgaatgaggatccgagggtgtta tattgcgcgcggcttattacttcgcgattcttattggctggatctagaggggaatttgtg tctgatagatcagtacgtgtgtctgttaagtcctcggctttgtcatgtttgagtgcgctt ttgcgattggcaccacatttactgacacactatctggacaaggatgctgatctaaagcta ttgaactgctcaggatcatcagaaggtaccgattcaaatcaggataacataaacgaattt attctcgagcgaaatgtctgctatcaagattcaattacagaatctattagccaggactta ttaaaaagctctgatagcatactaacttcaaagaaagacgccaaatcattagataaatcg cttgaaagcgagttgaaaagctctaaagatgtagcaagtaatattctggatagcaagtta gttgccagcggcttcagtgctgatacgaacatgactatcagtaacttaacgtcaacaaca gacggacagtcaaccggttaccctatgaccagtagtggggtcctatcttcaagcatagat ttggatatgaaattcgaccattttggtgacatagaagtcaaagaagaacctataaaagag agagtagtagagtctgagagtaagagtgaggagattgagtatcagcatatgagtgaagtg cttttgttgagtgaccacaatgatcctcaggtgcgaggattagtgcgcaattgtgtgggg agttatttggtagcagctttgcatgtagcgcagggtgactatattaactggcggagttat actgcgctaccgagagatattgccgatgtccttgcggttgagaaactagtcgatcttata ttaaaaggtttgcatgatgaaatgcactcagttgtatcggccacattatctacattaacc tatttggcaccttcactgtgtcactcgattggatcagctctggcagaaataggcacagta gcagataattcatattggctttgtcgacttaatcttgtgcagttttatgaaaaactaccg tatcagagattgtttatgctgtgccctgcatataagagtcatagtgaggcgatacttaac acgctcttccgtctgctggcagatcaggaccagaaagtgagaaatgctgcagctaaagct attgccaacatcacaccaattattcacccgaaacctcgaaccacccctatcacaatgcta acggaaacatcacggcagatgagtcgattgttttcctctgaggatagacgcctttcgtta gagcgagtgagagagatgtacttctatcaggacctacctgaacagatgaagagtggggat atattgcaagataaggacacgttgatagtgatggtatctgatattatggggcgactgatg gcttctaattgtaagaactatacgcaaggccttctttccaccttacgtgagatatgtcag cggtggtcaccatggcatcatagcgcataccacggtctgggtattttggcctactgtctg gcgagaattgaatgctgccctggtactgtgcccctccacaccacctgtcttgatatatgc cggcttgtatacccagctgaaattcataatataatgcgggacaaatccaatcgtgacata ttcgaaacacaagaagtgaaagagaagtggcaacacttggaaaatgatagagttgccagc ctttcggagaaattcctccaagtgacgctaaaaatgctgaacgttctcgttcatttgatt gaggaggtcaaccctaatgtccatatcaataagagtggaattgctttgcctggaagccca gtacggcggaagacacaagaactaactccgaggaaaagcagtttaagttctgatacggtt gacgacaaaggtcttaagaagaaaccgcacgtgcctccgaacagtttgaaagccaacttc gtcggacatttctatactgaacccgtttatatgaagctctacgataatttgagagcaact tattctaatcataagataaacctcgacgcaaaaggcagtatattctacgatttcctttca actacattaaaatctctagcaatacaactagagttatcaactgaagtcgaaataggtcct atcactgaagaattactctactacctaaaagttatcatgcccctttgcccggaaaataca gtatactgcgtgactcagctcctaaaatgccttttcgggacgaatattatcaaccagtac gctgatttcatgagcattgccaataaagaggagaagaaagaaaaatcctgtttctttgac gacgtgatgctgataaataatataagttttgagtctgagtctagacgtagtagcgtctgt tccaatgcaagtcagaagttttcggagaaaaatccgagaattattagagagagagaactg ttgattgcgttggagaatttcaataaaaacaggatggaaaggaaatggggaaataataag aaggagttggagagatatattcgcttgttcgagccggttgtcatacaggcgcttaagacg tacactgtagccagcgcaactggtgtatggagctcagtgctgtgtctgcttggaaggctt ctggcattgcgagtcaactactgcatgttggataccgaccagcttttcattggctttctc atgaagcagctggaactgcttgagcatcatgagataccgaattgctgtgatttagtcaaa agtattatgttgtttctggttcaattatcctcatcaaagcaccacacgaagcaaattatt gaaattcctaagcttattcaactgtgtgatggtctgatggcatcgggtgctcaagacgaa tgtatcgcgggcttagaacccgtagcactaaaggttttcagcaatataggaggatctggt ataggtactggtggattaggtcgtgcccaacagcaagagattcaagcgaccagagaagtt ctgttttatatgttgcaaaaaacgatgcatctacctaaggtgttagaagtagtatcgtgt gttatatctctgtcccaagagcaaccagaaaatcagtaccgttggtgtgaactcgcaagt gatacgttattgcacgtgctcgctgaacgcagcgctgaatgcgaatacgcgcacgcgcta cgatcgcttgaggcgttgctggaaattatatcaaaggatgtgcttctggaacagacgaga gttgagatgttgcttaagattttattcaaagctccgccagagcaggcaacaacaccacga aagttaaagttgcgatacttatctatcatattagtacttcttcgcaaagtactcgtactc attccagaaagcgagatcctgctatcaataaattacctaaaagcgacttgtatcgcacct caatcaatattcttcaacgttaaacccaacattgacccgttaaacgtccaaaacgtgaac gaaacttgtgcgaatttatctcccgatgtgatcctagtacgatttctcttcaaaacgtta acgtatgccatgatagagctggatgacgtaacaactggttatgaagcgctgtcagaacat gatgaattactgtattctgtgagcgttggacttgtagtgcaagttaaacatatgctgcat ttgacaaatggttgcgggttcccattaacagcaaagagtgcccaaaaccttctacaccag gaacagagtggtttgaatactggcctttatagtcccgaagagaatattccacttgacgat ctgaatcgacgagttttgagggcccggactgccctaactatgcactggtcacatttactt atcaggttaaatttcctctctcataaatactggcagaaacttatcggtttctcccggagt ttgcctttaagtgctcgtgccactcattacgcgcacgcccatcacgctgacgccacacaa ctggctgtagcgttagcttactgcgagtattttgtcgaaaacggtctaggagaagtggtc cacttatcgtggttagtgggaagtcgtgcacataccctggtgtctcactgcacggaacca cttgtggccgcgttgctgtcggccctgcaacgatgctccgctactagtgccttgctgctt catgcaatcgctgctaggtgtcagccttgtttacagggtgaatttgctttgaatacgtat aaagtgctatcttcatgtcatgagagtcagttaggacctttggttttcttcatatgtaga atcattggcaagttggagccttccattggtgcaagattctcgcagctagcgatagagaga tgcaaagatttacgagatatgggtgaagatggcgtgaaaaaacagctcagcaaggaagat gttcaagtggccttggaacttttgcagcgggaccgggcgcatcaaagatacgcaagtcta gtctcagagctgaacgctctggcatcaactgtgtttgatttgtcacctctggcattagcg caagagcgtatagttaatcctcaaacgattcgtactacgacaatcgatcaacaatggctg ttgttgcaagctaagactgggtgctgtcagcgtgaaaattctctaccaaaagtctctcga tacaatgatttagcgaacttactttcgaaattacctctggaagatctcacaactattatg tcctgtccagagtttgacagaaaaataataagtgtatgcttcaaagtcacatgtaatacc ttcgttagggaatttctcagcgcattatcagtaaacgaattgaaagagacggaacaagaa acgattaggcagcaaagagagatggcaagaagtaaagaagaaatgaccgcgtccgttgac agtaataaattaaacgttgtcaacatacacgttttcaaaaagagcgataataaagaatca aaatcccaattctttattcccatgacttcgattgacaatgaagttcaagagagcttcggc agtttgacaattaccgaagaggaatgcgaaatatcagtgccagagttgccgaaattgtac atagccagtgtatctacattggacaagtcgttggcagacattttgagactcttcccaaaa caaaaccgaccgctgagccaatccgagaattttagccttaacaaagagcagacaatagac aggtacactcggcgttgtcatcaagtgttccaagacaaattgttttaccaagagtttatg actatacaaacaattctttctggttacctaaaggcgttagacaaaatcatcgccgtaata gacgaaacggactgcgatctggtcgaaaaatgtatagagaatctattacccagttcctta gctcgtaacttggccatttttagcgttgtatctcttcagtatatgtcatttttgataagc aacaaaaaagtagtggaagcaccagtgaacgcggaagtgtcgtttcgcgcgaatttaccc acagacaatatttgtgtagacaatgttttaagggtgaccataaagaatgttgcgaaagcg ttgaactttgaggagatttggtgcgaactgaacattgacagtaatttaaacagggtacag tcagctatatgctgtttatatgcggttgtgaaatatttagttaaggatcgaaagccgctg atctcaaagtcccatatacttggggacgacggccccaaagcggatataatgataactggg aacaaattgattacattaattgaatattgggaggagaatttctatgtgaaaatggaaaaa ttgggaaagtacgagaaggtgatagaaagtttgattataaggttggctcgttttgaagct gtgagtactatgtctctaataccgcctatagcgtgggcgagtggagaagtgaagacgcga ggcccacttgaattgcccttacgtgcgcttcaggatatggatgtgttgcaatctttcttg ttcagggtaaacttaataggttggtcctcaaagaaacagtttgaagagatttgggttggt ttagtgggggcgttacaaggcaacgggccacattgggcggtacgtggcattagtcagttg ttggtgacggccgcaccctacgtacgaggcaaggggatactacatgttccaagggtctat ttaccgtggaacgatggtatgcaaagattgcgaaacatcctagtcgggacatctgcgtac agaatatttgaggacataaatttggaacgcgtcccactacaacaagacaacattgccggg taccagtacgcacagtttagtaccgagtaccttaaactggcttcggatcttgtagacgag gcccactaccgtgtacgtagagaagtgaaacgcaagcggaagtgtacggagatagacgta aacagttgcgtacaattattgatggatgtcgctactgatatgcttgaaccacaggcacca actggtctcgcagcccgtgttgccctactatcggctattacgaataccagctcagtattc agttcggccaatatatggcgacgggctggtactcaactaagtgccttgcacgccgctcaa tggccgcacgctgcttcagcggccctacacgctttagcccattgcctccccgtgctgcat gctgcagcgccaggcgacacgaaacaggaattaacggcagtgcatgagaagttgttgaag tctctatcggcaagttatgcgccgctgcgacaagccgcgttaaggggatggttgctgcaa ttgccttatgcggccgctagtgatacattgccagatttacgacaagttgtagtacgtcaa ttggctgacccgtcccggatatccgtttacgagcagagtctatattgggcggtgctattc tctctggcgccagatcaaacccttttagccgctaatttcttggctgcaaacccccaccac tattgtgcggaactcgttgcaaggggtatcatatctgtgttacgaagacaagtgttgcca aaggatatcaagaaaactctcgtagaaaaacttttagaaaacatgaacaagttctctgaa gaacacgcagttcaaatacttcttgttcatttgttttctgcggatagcaaactcctatcg tcaggccgtcgcgaagtatcagacatggatcctgacgtactcatgagcgcaatggaacgt ataacgcgcttatacgcatccttacgtcacgtttcacgtcccgacgtacaaagtatatgt ggcaatgcattgcggcatttattaagagaaactctaccgcctgctgcgacactaagccga gtcttaatagagcttttagatacatgcagaatggctgaggcaattgtgcctgaccctttg agtgatagagacgtctgcgtgcgcgcagctatcgctaactgtgaggttgtttttgaggta ttccaaacatcactttctcaatctcaattaccagttctcagcggttggttatttgaggct ttaggacaattagtcagtgggagggtctctcctaagctcctcccacatgtgctattgcca cttttagtcgccgcttcgcccctcccacttttgaggcatacgcagtctttggcactacac gtgttccatagtgggttctattcgcaagtgaaacaagattttgggatattcagcgactta ttcagaagcacaaatactatgtcattctccgagcgtcggttgctttgtctagtggctctt cactcacagtttacagaccaacagttgctcagattgcgagagttgtgtgaagataacgag tatttgactgatttaagacaatgcttgctagatgttactagctag

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