Pieris rapae (cabbage white): 110998994
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Entry
110998994 CDS
T05162
Name
(RefSeq) GIGYF family protein Gyf isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110998994
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110998994
Surveillance factors
Other surveillance factors
110998994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
PRO8NT
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
110998994
NCBI-ProteinID:
XP_022123525
LinkDB
All DBs
Position
Z:6176201..6191699
Genome browser
AA seq
1390 aa
AA seq
DB search
MGSGGNPIKFGPEWLRNLGEGTNHGTSSRQTNNQNNPNVSESAQGSSSRGLNNLQTSRAS
SRDTIVGTSSGFRQNNTSRIHLANLRYGREEMLALYDRMVAAPEQLKQFELLYHSRGKAP
SALNIFKDSPNVPVEGATGGQIVGTGLTSFNTGRGRGNGVGTVYSKKATTVRPNTTNAGR
DWNRVRTDPAQGGSVPPNEEVRRSWNTSSTSRATRQPTTEQSGWASTKLFRNRRPIRSTN
WRQSGREEGDEWRSQEHTSRFPNPEREWAERPSQETRQSWNANRRPWNEAQNDEIPEWAN
DNADAGAGTFDSSGAFHGCSDEPRPPEQTFPVTRQQEEVAEKWWSSEKAKKLSPKRLISD
RKQGQASTSDEASTETETNVNESEVTITESMADKDVNTKNYDAIMRPDMNVGNESNNLSN
FQSVMISQNNTLRQKHQNIVTSTSSSSSTTQQRSSYAIFTDNSNHDAEHPKNAQQEKLFE
GHSADNNVPIRNNATPNNPHGATVDMSVLPGQPGQQGGLVNTQMHIGPSTTGLEAHIASS
TTNIPSAGQNSMASLGLQNSASGTTLNIQKNEMMMPPLHGLPQMMSNTPFNPGMNMAMPM
PMSMPTMQHHSKMMDAFQHVRPHDMAQSNASVPYLGQNNNVPMGNNLPPNPALGVCMFPP
HGIPRHAAQPPLLNSVYGGPSVISNTQNFLADLWYYEDPEKKIQGPFTSQEMWNWYVAGY
FQPSLIVRRAFENTMRPLADYGPMPFFKGGMNSHVNYPRSPEGIIPQAGFGLGETSRVWS
PAPHSQNAIWTEPMLYPESNVNNLPRHFWDVEPPAMPSKSIILPKDMKTEDEILAQILSS
QNIPLPGVPPSENMTPLNNLHAMTVDGGFPKPPVVPDLSQLPAIQPELIPRFSPTTVETK
PEIKEPEFLEPTVNPVPVEPDADSAKVPPTKGELKILKPNKNDTDKNKNKDSNSPKTKAK
KSKEEIKEINATVTTMDDVASKSLGKRSVESSPSKASKDVKVLNKKELEKEKKELLKDGF
TIVKGAEKNNNKEIKKKVEEAKAVEEAARKKKEEEAVAAADETRRIVLATAIKKQVDQQQ
QKQVADSVAKKAPWSAVATQAAATSKSEMTLAVIQRLERERKLEQIKEQQEMMQIIAQQQ
AATLAREQEVQAGLGWATKKNPNATSPNLAEIQAKTRREASSSTVTSEVVEEKSQSSPVT
ANHAPWRSSSNGGFWDSPSQRNKSDLEKSESKPVETKIKFKSPVRAEPLKKKTPAMEFDA
WCTQALGIWSSNIDVSTFMVFLKDIESPYEVKDYVKYYLGESKESIDFSRQFLERRSKLL
RVGMVTPSDDLCSPALAINPRTNSISDYQEVKGKGKKTKKNKMMKVDARILGFSVTAAED
RINVGDIDTA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggggagtggaggtaatcctattaaatttggtccagagtggcttagaaacttgggtgaa
ggaacaaaccacggaacatcttccagacaaaccaacaatcaaaataatcctaatgtatca
gaatcagctcaagggtcttcaagcagaggactaaataatctacaaacatctcgagcatct
agccgagatactattgttggtacatcatcaggttttcggcagaataatacttctagaatt
cacctagctaatctcagatatggacgagaggaaatgttagcactttacgatagaatggtt
gcagcaccagaacaattaaagcagtttgagttgttgtatcactcaaggggaaaagcacca
tccgctttaaacatttttaaagatagtccaaatgttcctgttgaaggcgctactggtggt
caaattgttgggactggccttacaagtttcaatactggtcgtggtcgtgggaatggggta
gggacggtttattctaagaaagcgacaacagtgcggccaaataccacaaatgcaggaagg
gattggaatagggtaagaacagatcctgcacagggaggctctgtgcctccaaatgaagag
gtcaggaggtcttggaatacaagtagtacatctagagcaactagacaaccaacaacagaa
caatctggttgggcatcaaccaaattgttcagaaacaggcgaccaatacgaagtactaat
tggagacaatcaggcagggaggaaggcgatgaatggaggtcccaagagcacacctctaga
tttcccaatcctgaacgtgaatgggctgaaaggccgtcacaggaaacacgtcagtcttgg
aatgctaatcgtcgtccctggaacgaagctcaaaatgatgaaataccggagtgggccaat
gataatgcagacgcgggtgctggcactttcgattcgtctggagcatttcatggatgcagt
gatgaacctcggccaccagaacagactttccctgtaacgcgacagcaagaagaggtggct
gaaaagtggtggtcatcagaaaaggctaaaaagctctctcctaaacgcttaatctctgac
aggaaacagggacaagcctccacatctgatgaagcaagcactgaaactgaaaccaatgta
aatgagtcggaagttacaataacagagagtatggcagacaaagatgtcaacactaaaaat
tacgatgctataatgcgtccagatatgaatgtcggcaacgaaagtaacaatcttagcaat
ttccaatccgtcatgatttctcaaaataacaccctgcgtcaaaaacaccagaatattgtg
acctcaactagctcttcttcttctacaactcagcagcgcagctcatatgctatttttacc
gataatagcaaccatgacgctgagcacccaaaaaatgcacaacaagaaaaattatttgag
gggcactctgctgataataatgtgcccattagaaataatgcaacacctaacaatccacat
ggggctactgtagacatgtctgtattaccggggcaaccaggacagcagggaggcctagtt
aatacacaaatgcatataggaccttccacaactggcctagaagcccacattgcttcaagc
actacaaatataccaagcgcagggcaaaacagtatggcatcactaggattacaaaattca
gcatcaggaactactttgaatatacagaaaaatgaaatgatgatgccgccccttcatgga
ttaccacaaatgatgtcaaacactccatttaacccaggaatgaatatggctatgcctatg
ccaatgtctatgcctactatgcaacaccattcaaaaatgatggatgcatttcaacatgtt
cgtccacatgatatggcacaatccaatgcttctgtgccatatttagggcaaaataataat
gtgccaatgggtaacaatcttccaccaaatcctgcactgggagtctgcatgttcccacct
catggaattccaaggcatgctgctcaaccacctttactaaattcagtctatggtgggccg
tcagttataagtaacactcaaaactttttggctgatttgtggtattacgaggacccagag
aaaaaaatacaaggaccatttacatcccaagaaatgtggaactggtacgtagctggatat
ttccagccttcactgattgtgcgcagagcttttgagaatacgatgcgtcctctagctgat
tatggaccgatgccattcttcaaagggggaatgaactcacatgtaaattacccacgctcg
cccgaaggaattattccacaagccggttttggattaggcgagacgtctcgtgtatggagc
ccggctccacatagtcaaaatgcaatttggacggaacctatgttgtatcctgaatcaaat
gttaataaccttccgaggcacttctgggacgtcgagccgcctgcaatgccttctaaaagt
atcatactgcctaaggacatgaaaacagaggatgagattttagcacaaattttaagttct
caaaatataccattacctggggtacctccctccgaaaatatgacgcctctaaacaatcta
catgccatgactgtcgacggcggttttcccaaaccacccgttgttcctgatctctcacag
ctaccagctattcaaccagaattgattcctcgattttcgccgactacagttgagacaaaa
ccagaaataaaagaaccagagtttctggagcctactgtgaatccagtcccagtagaaccc
gatgccgatagtgctaaagtacctcctacgaaaggagaacttaagattttaaagcctaat
aaaaacgacacggataagaataaaaacaaagattctaatagtccaaaaacgaaagctaaa
aaatctaaagaggaaatcaaggagattaatgctacagttactactatggatgatgtggca
tcgaagtcactgggaaaaagatctgttgagtcttcaccttcgaaggcaagtaaggatgtc
aaagttcttaacaagaaagagctggaaaaagaaaaaaaggaattattgaaggatggtttt
acaatcgtgaaaggggctgaaaaaaataataacaaggagatcaaaaaaaaggtggaagag
gccaaagctgtcgaagaagctgctcgtaaaaaaaaagaagaagaagccgtggcagcagcc
gacgaaaccagaagaattgttttagcgacagccatcaaaaagcaagtagatcagcaacag
cagaagcaagtggcagactctgtcgctaagaaggctccctggtcagcagtggccactcaa
gcagcagccacaagcaaaagtgaaatgacgttagctgtaattcaaaggctcgagcgcgaa
aggaaattggaacaaataaaggaacagcaggagatgatgcagattattgctcaacagcag
gccgcaacattggccagagaacaggaagtacaagccggtcttggttgggctacaaagaaa
aatcccaatgctacttcaccaaacttagctgaaattcaggcgaaaacgaggcgagaggcg
tcatcttcgaccgttacatcggaggtcgtagaggagaaatcacaatcatcccctgttacg
gcaaatcatgcaccatggagaagtagttcaaatggtggcttctgggattccccaagtcaa
cgaaataaatcagatctagagaaaagtgaatctaaaccagttgagactaagattaaattc
aaatcgccagtacgggcagagcctttaaagaagaaaactcccgctatggagtttgatgct
tggtgtacccaggccttgggcatatggagttccaacattgatgtgtcgactttcatggtt
ttcctcaaagacatagagtccccttacgaagttaaggattacgtcaaatactaccttggc
gaatccaaagagtcgatcgacttttctaggcaattccttgaacgaaggtcgaaattactt
cgtgtcggtatggtgacgccatcagacgatctctgttcgccagcgcttgccatcaatccc
cgcactaattcaatctccgactatcaagaggttaaaggtaagggtaagaaaacaaagaag
aacaaaatgatgaaagtggacgctcgcatactgggtttctcagttacggcagccgaggac
cgcataaatgttggcgatattgatactgcatga
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