Pieris rapae (cabbage white): 110998999
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Entry
110998999 CDS
T05162
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110998999
03015 mRNA surveillance pathway
110998999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
110998999
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110998999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
110998999
NCBI-ProteinID:
XP_045488684
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Position
20:complement(7921366..7937288)
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AA seq
658 aa
AA seq
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MTSVARRPEQDDSGEYSDASQEIEQNNSGNDAAQQSDYDSQGSDAEHSDRDPEAQESEKR
VDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESSNTTSETASEKKEGSEPAAERRRAPRK
SETVNKWSHDKFNENEQMPKSRDELVSIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTWE
DEEAYKRQAIQAAHKVPPSPSDFPELNAVNKPGRKPRVPRPRSKSQPASNDSSENGSLRR
NASIKAKSRPGAKANSSAKEKMPPLENLTITTVVNNNQNSQPLRKVNTTIGQQAPVSTDL
AKRKPLPTQNAQSNAAKQSQQKPAQNQQSQQGTGESRGGSKRYSSLRQRPLAEPYSPQNQ
QQNQSNQQQNQQNQFRHHGEFAPGSNQNNTQHQGSPANQMHSQQIAHQTQLRNANTNQQG
HGPSPPHQPVPNQPIAQQQVRLGLMEQQPMVPHAHHAMHNMPQQHNIGQIQAPQAYAPPA
MMPAQYMQQSGSGAVYGGAMYQPPQYPPHQMYPHHNYPAPGGLTYYTCSEQEQPPRPQRR
PTAAIPIVKPAIPERPPNSEKDNIDRIVENMFVRKPWPATHDAKDKEKSQEPQSKDSSQP
NSLTSSSISTDSKTEEKKEIVQEPKEIIQEPKEIQEVQKETQDSQKESQEETERETEA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtggctcgaagacctgagcaggatgattcgggtgaatactcggatgcctcg
caagaaatcgagcaaaataattctggaaacgatgctgctcagcaatcggattatgattcc
caagggagtgatgctgaacattctgacagagatccagaagcacaggaatctgagaagcgc
gtagatgatgatgaggaccgaagtaatccgcagtacattcctaaacggggcacattttat
gagcatgatgatcgaacagcggcgagtggtgaagaatcaagcaacaccacatcagaaaca
gcctccgagaagaaggaaggctctgagccggctgctgagagacgtcgtgcgcctcgcaaa
tctgaaacagtgaataaatggtctcacgacaaatttaatgagaatgaacagatgccaaaa
tcgagagatgagctggtatccatatatggatatgatattcgcaatgaggacgctccgcct
catgcaaggcgtaatagacgttatggacggggaccgaataagtatactcgtacgtgggaa
gacgaagaggcatacaaaaggcaagcgattcaggcagcacataaggtaccgcccagcccg
tctgatttcccggaactgaatgctgttaataagccgggacgtaaaccgcgtgtcccaagg
ccgcgttcaaaatcccaaccggcctcaaacgattcctcagagaatggttccttacggcga
aatgcctcgataaaggccaaatctagacctggggccaaggctaactcctcggccaaagag
aagatgccaccattggagaaccttacaataaccactgttgttaataacaatcaaaacagc
caaccgttacgtaaagtgaatacgactattgggcaacaggcgcccgtgtccacggatctt
gctaagaggaaaccacttccaacgcagaatgcgcaaagtaacgccgcgaaacaatcgcaa
cagaaacccgctcaaaaccaacaaagccaacaggggacaggtgaaagccgtgggggcagc
aaacggtacagtagtttacgacaacgcccgttggctgaaccgtattcacctcaaaatcaa
cagcaaaatcaatcaaatcaacagcaaaatcaacagaaccagtttaggcatcatggtgag
tttgccccgggctctaatcaaaataatactcagcatcaaggcagtccggccaatcaaatg
cattcacaacaaattgcacatcagacgcagttacgtaacgcgaatactaaccaacaagga
catgggccatctccgcctcaccagccggtacccaatcaaccgatcgctcagcagcaagtt
cgtctgggtctgatggagcagcagccgatggtgcctcatgcccatcacgccatgcacaat
atgccgcagcaacacaatattggtcaaatacaagcgccacaagcatatgcgcccccagct
atgatgcccgcacagtacatgcagcaaagcggtagcggggcggtgtacgggggagcaatg
taccagcctccacaatatccgcctcatcaaatgtatccgcaccacaattatccggcccca
ggcggcctaacgtactacacctgtagcgagcaagagcagccccccagaccccagaggaga
ccaactgctgccattcccatcgtcaagcctgctatccccgagaggccgccgaattcggaa
aaggataacattgaccgtatagtggagaatatgtttgtcagaaaaccttggccggccact
catgatgcgaaagataaagagaagagtcaagagcctcaaagtaaggattcctctcagccg
aacagtttgacatccagctcaatatctaccgattccaaaacggaagaaaagaaagaaata
gtccaagaaccaaaagaaataatccaagaaccgaaagaaatccaagaagtgcagaaggag
actcaggacagccagaaagagagtcaagaagagacggaaagagaaacggaggcctga
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