Pieris rapae (cabbage white): 110999283
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Entry
110999283 CDS
T05162
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
110999283
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110999283
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110999283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
SNF2-rel_dom
CMS1
MOEP19
KH_2
AAA_25
Cas3-like_C_2
DUF2529
Motif
Other DBs
NCBI-GeneID:
110999283
NCBI-ProteinID:
XP_022123969
LinkDB
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Position
Z:complement(4591110..4598903)
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AA seq
639 aa
AA seq
DB search
MSDWESDCDDYYSTLSQNRTPPQQNFQSRGSYSGQSQRGGQYSRNITTARGRGYFRGNNK
VISIPSTKVGRVIGRGGLKIRDLEYESEARIKIGNSAGDNTDITLFGTNSAIEKVEQMIK
DLTIDKEASKKQNLQSASSAETASQVSVYEKFTYVNSEGKKVTDWAAASAYADQVQREMW
DKLPPIVKNFYNEDPTIAVMPPNEVAYWRLCNFDIKVTRIPENWEAEAIPNPVLTFEQAF
KDYPEILDEIRKQQFTKPSPIQSQAWPVLLKGEDMIGIAQTGTGKTLAFLLPALIHIEGQ
PTPREKRPGPTVLILAPTRELAIQIQREVNKYHYKGINSVCIYGGADRREQIDSISKGVD
IVIATPGRLIDLIKANHIDTAHFSYIVLDEADRMLDMGFGPQINVCFLNVRPEHQCVMTS
ATWPSAVRQLADKYMHNPIYINVGSMDLAAVHTVTQKVMVVMEEEKDTILLDFIRNMDPT
DKVLIFCAKKNTAADVTANLACKGYYCESLHGDRDQSDREAALEDIMNGTVNILVATDVA
SRGIDIKDLTHVINLDFPLKIEEYVHRIGRTGRAGKTGIALSLVTKYDWANAGELIKILE
EAHQEVPSELREMADRFEAKKSTSKHGRGGRGRGRRPQW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaatctgattgtgacgattactattcaactctatcacaaaatagaaca
ccgcctcaacaaaatttccaatcgagaggaagttattctggccaaagccaaagaggcggt
cagtattctagaaatatcactacagcacgtggtagagggtattttcgtggtaataacaaa
gtcatatcaataccctcaactaaagttgggcgagtgataggtcgaggaggattaaaaatt
cgcgatttagaatatgagagtgaagcgaggataaaaattggtaattcagcaggtgacaac
acagatatcacactatttggaactaattctgcgattgaaaaagttgaacaaatgattaag
gatcttactatagataaagaggcgtcaaaaaagcagaatttacagtctgcttcgtctgct
gagactgcttctcaggttagcgtatatgaaaaatttacatatgtgaatagtgaaggaaag
aaagttacagattgggcagcagcatcagcttatgctgatcaggtacaaagagaaatgtgg
gacaaattaccacctattgtgaaaaacttttataacgaggatcctacaattgctgtaatg
cctccaaatgaggttgcttattggcgcctgtgtaactttgatattaaagtaacaagaata
ccagaaaactgggaagcagaagcaataccaaatccagtgttgacatttgagcaagcattt
aaagattatccagaaatacttgatgaaatacgtaaacaacaatttacaaaaccttctcca
atacagagccaagcttggcctgttttactaaaaggagaagacatgataggcattgcacaa
acaggaactggcaaaactttagctttcttgttgcctgctttaattcatattgaagggcag
ccaacacctcgagaaaagagaccggggccaactgtacttattctagctccaacaagagaa
ttagctatacaaattcagagagaagtcaacaaatatcattacaaaggcattaatagtgta
tgcatatatgggggtgcagatcgccgtgaacagattgacagtatctcaaagggggtggat
attgttattgcaacgccaggcagattaattgatttgatcaaagcaaaccatatagatact
gcccacttctcctatatagtattagacgaggcagatcgaatgctagacatgggctttgga
ccacagatcaatgtttgtttcttgaatgtgagacctgaacaccaatgtgtcatgacatct
gccacctggccttctgctgtccgccaactggctgacaagtatatgcacaatccgatttat
ataaatgttgggtccatggacttggcagcagtgcacactgttacccaaaaagtaatggtt
gttatggaggaagaaaaagatactattctgctggactttatacgtaatatggatccgaca
gataaggttctgattttttgtgccaaaaaaaatacagctgctgacgtcactgcaaatttg
gcgtgtaagggatactactgtgaatccttgcatggtgatagggatcagagtgacagagaa
gcagctttagaagatataatgaatggaacagtcaacatattagttgccacagatgttgct
tcccgggggattgacataaaagacttaactcatgttataaacctagactttccattgaaa
attgaggagtatgttcatagaattggaagaacaggaagggccggtaagacagggattgca
ttatctttagtgacaaaatatgattgggcaaatgccggtgaattgataaaaattttagaa
gaagctcaccaagaggttcccagtgagttaagagaaatggctgaccggtttgaagccaaa
aagtcaacaagtaaacatggtcgaggtgggcgtggtagaggaagaagaccacagtggtga
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