Pieris rapae (cabbage white): 110999287
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Entry
110999287 CDS
T05162
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
110999287
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110999287
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110999287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
SNF2-rel_dom
CMS1
MOEP19
AAA_25
KH_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110999287
NCBI-ProteinID:
XP_022123974
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All DBs
Position
Z:4901347..4903888
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AA seq
633 aa
AA seq
DB search
MSDWESDCDDNYSTLSQNRTPPQQNFQSRGSYSGQSQRGGQYSRNTARGRGYFRGNNKVI
SIPSTKVGRVIGRGGLKIRDLEYESEARIKIGNSAGDNTDITLFGTNSAIEKVEQMIKDL
TIDKEASEKQNLQPETASQVSVYEKFTYVNSEGKKVTDWAAASAYADQAQREMWDKLPPI
VKNFYNEDPTIAVMPPNEVAYWRLCNFDIKVTRITENLEAEAIPNPVLTFEQAFKDYPEI
LDEICKQQFTKPSPIQSQAWPVLLKGEDMIGIAQTGTGKTLAFLLPALIHIEGQPTPREK
RPGPTVLILAPTRELAIQIQREVNKYHYKGINSVCIYGGADRREQIDSISKGVDIVIATP
GRLIDLIKANHIDTAHFSFIVLDEADRMLDMGFGPQINVCFLNVRPEHQCVMTSATWPSA
VRRLADKYMHNPIYINVGSMDLAAVHTVTQKVMVVMEEEKDTILLDFIRNMDPTDKVLIF
CAKKNTAADVTANLACKGYYCESLHGDRDQSDREAALEDIMNGTVNILVATDVASRGIDI
KDLTHVINLDFPLKIEEYVHRIGRTGRAGKTGIALSLVTKYDWANAGELIKILEEAHQEV
PSELREMADRFEAKKSTSKHGRGGRGRGRRPQW
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactgggaatctgattgtgacgataactattcaactctatcacaaaatagaaca
ccgcctcaacaaaatttccaatcgagaggaagttattctggccaaagccaaagaggcggt
cagtattctagaaatacagcacgtggtagaggttattttcgtggtaataacaaagtcata
tcaataccctcaactaaagttgggcgagtgataggtcgaggaggattaaaaattcgcgat
ttagaatatgagagtgaagcgagaataaaaattggtaattcagcaggtgacaacacagat
atcacactatttggaactaattctgcgattgaaaaagttgaacaaatgattaaggatctt
actatagataaagaggcgtcagaaaagcagaatttacagccagagactgcttctcaggtt
agcgtatatgaaaaatttacatatgtgaatagtgaaggaaagaaagttacagattgggca
gcagcatcagcttatgctgatcaggctcaaagagaaatgtgggacaaattaccacctatt
gtgaaaaacttttataacgaggatcctacaattgctgtaatgcctccaaatgaggttgct
tattggcgcctgtgtaactttgatattaaagtaacaagaataacagaaaacttggaagca
gaagcaataccaaatccagtgttgacatttgaacaagcatttaaagattatccagaaata
cttgatgaaatatgtaaacaacaatttacaaaaccttctccaattcagagccaagcttgg
cctgttttactaaaaggagaagacatgataggcattgcacaaacaggaactggcaaaact
ttagctttcttgttgcctgctttaattcatattgaagggcagccaacacctcgagaaaag
agaccggggccaactgtacttattctagctccaacaagagaattagctatacaaattcag
agagaagtcaacaaatatcattacaaaggcattaatagtgtatgcatatatgggggtgca
gatcgccgtgaacagattgacagtatctcaaagggggtggatattgttattgcaacgcca
ggcagattaattgatttgatcaaagcaaaccatatagatactgcccacttctcctttata
gtattagacgaggcagatcgaatgctagacatgggctttggaccacagatcaatgtttgt
ttcttgaatgtgagacctgaacaccaatgtgtcatgacatctgccacctggccttctgct
gtccgccgactggctgacaagtatatgcacaatccgatttatataaatgttgggtccatg
gacttggcagcagtgcacactgttacccaaaaagtaatggttgttatggaggaagaaaaa
gatactattctgctggactttatacgtaatatggatccgacagataaagttctgattttt
tgtgccaaaaaaaatacagctgctgacgtcactgcaaatttggcgtgtaagggatactac
tgtgaatccttgcatggtgatagggatcagagtgacagagaagcagctttagaagatata
atgaatggaacagtcaacatattagttgccacagatgttgcttcccgggggattgacata
aaagacttaactcatgttataaacctagactttccattgaaaattgaggagtatgttcat
agaattggaagaacaggaagggccggtaagacagggattgcattatctttagtgacaaaa
tatgattgggcaaatgccggtgaattgataaaaattttagaagaagctcaccaagaggtt
cccagtgagttaagagaaatggctgaccggtttgaagccaaaaagtcaacaagtaaacat
ggtcgaggtgggcgtggtagaggaagaagaccacagtggtga
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