KEGG   Pieris rapae (cabbage white): 110999495
Entry
110999495         CDS       T05162                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
prap  Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:prap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:prap03041]
    110999495
Spliceosome [BR:prap03041]
 Complex B
  Other components
   Complex B specific factors
    110999495
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 WDR54 LisH_WDR26 Beta-prop_NOL10_N DUF7165 LisH_PAC1 zf_topless PQQ_2
Other DBs
NCBI-GeneID: 110999495
NCBI-ProteinID: XP_022124249
LinkDB
Position
8:9849821..9852974
AA seq 519 aa
MSIEIESADVIRLIQQYLKESNLTKTLHTLQEETGVSLNTVESVDGFCADINNGQWDSVL
KATASLKLPERKLMELYEQVVLELAELRELGAARALLRQAPPCLLMKRLRPDRYLHLETV
LSRSYFDPREAYGGGGGAAPGAGGKEWRRAALAAALAGEVSVVPSSRLLALLGQALKWQQ
HQGLLPPGTTIDLFRGKAAIRDEEDDQCPTHVSKIIKFGQKSHVECARFSPDGQYLVTGS
VDGLVEVWNFTTGKLRKDLRYQAHDEYMSMSAAVLSLTFARDSDTLAGGAHDGKVCVWRV
STGAVQRRLERAHAKGVTSLQFSRDATQLLSASFDRTVRIHGLKSGKLLKELRGHTSFVN
EAVWTPDGHGVLSGSSDGTVKVWAVRTGECAATLKPLGSGEPAVNSVLLLPKTPEHFVVC
NRSNTVVVMNMAGQIVRSLSSGRREAEGGALVCAALGARGRLVYCVAEDLVLYAFCAQSG
KLERTITVHDKAVIGLAHHPHQNLLATYSEDGMLKLWKP
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtcgatagaaattgagtctgcggatgtaattcgcttaatccaacaatatcttaaggag
tcgaatttaacaaaaacattgcacactttgcaggaagagacaggtgtttcattgaacaca
gtagagagtgtggatgggttctgtgcagacataaacaatggacagtgggatagtgtacta
aaggcaaccgcatcattgaagttgcccgaacggaagttaatggagctttatgagcaagtt
gtgcttgagttagctgagttgcgtgagttgggtgctgcgcgtgctttgttgcgccaggct
ccaccatgcctactcatgaaacgactgcggcctgatcgttacttgcacctagagacagta
ctttcgcgttcctacttcgatccgcgtgaggcatatgggggtggaggtggtgcagcacct
ggtgcaggtggcaaggaatggcgtcgtgcagctttggcggcggcacttgctggagaagtc
tctgtagtaccctcatcccgtctccttgcactgcttggccaagcactcaaatggcagcag
catcaaggattgctgccacctggaactacaattgatttattcagaggaaaggctgctatc
agggatgaagaagatgatcagtgccctacacatgtctcaaaaattatcaagtttggacaa
aaatcacatgttgagtgtgctagattttcacctgatggtcaatacctagtaacaggctct
gttgatggactagttgaagtatggaatttcacaacaggaaaactgcgtaaagacttacgt
taccaagcgcacgacgagtacatgagtatgagcgcggctgttctatcgttgacattcgcc
cgcgactctgatactttagcgggtggagcgcacgacggcaaagtgtgtgtctggcgggtc
tccaccggcgccgttcagcgccgcctagaacgagcccacgcaaaaggagtcaccagtctg
caattctctcgtgatgccacccaactcctttctgcttcctttgaccgcacagttcgcatc
cacggccttaaatcgggaaaattgctaaaggaattacgcgggcacacatccttcgttaac
gaagcagtatggacaccggatggacatggtgtacttagcggatcgtcagatggtacggtc
aaagtctgggcagtgcgaacaggcgagtgtgcggcaaccctcaaacctctcggctctggg
gagccagccgtcaactccgtcttgctcctgccgaagacgccagaacattttgtggtttgc
aatcgtagtaatacagtggtagtaatgaatatggcgggccagatcgtgcgatcgttgtct
agtggtcggcgtgaggctgaagggggagcattagtatgtgcggccctcggagcgcgaggt
cgccttgtgtactgtgtggctgaagacttggtgctatacgctttctgcgcacaaagcggt
aagctagaacgtaccatcacggtgcacgacaaggccgttattggtctcgcgcaccatccc
catcagaatctgcttgccacgtatagtgaagatggcatgctcaagttatggaaaccataa

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