Pieris rapae (cabbage white): 110999835 Help Entry 110999835         CDS       T05162                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism prap  Pieris rapae (cabbage white) Pathway prap04382   Cornified envelope formation prap04512   ECM-receptor interaction prap04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:prap00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110999835  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     110999835  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     110999835  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:prap04147]     110999835    00536 Glycosaminoglycan binding proteins [BR:prap00536]     110999835 Exosome [BR:prap04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110999835 Glycosaminoglycan binding proteins [BR:prap00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110999835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110999835 NCBI-ProteinID:  XP_022124763 LinkDB All DBs Position 16:7070982..7092249 Genome browser AA seq 1794 aa AA seqDB search MSGPARARLFVPVSLLLLWIPTQTTAVVCNQTRCDCTGLKGDRGDPGPPGIPGILGEYGD DGPEGRMGIMGELGDLGERGDAGDKGERGSDGPYGPRGYTGPQGPPGFEGIRGVFGLDGC SGVDGAIGLPGPQGIPGDRGLPGPYGEKGAQGLAGEGGVNSQGAKGVQGDFGRHGAPGPP GPTGWIGDSGPRGETGDQGPMGIPGVPGYRGDTGEDVVGSPGEKGDQGEVGDPGRPAQVV YIQQVQQNITILAKGNRGDRGPRGQQGVKGIKGEVGSTGRPGPYGLHGAQGYKGDQGENG PRGKPGVRGAIGPAGPKGDKGAPGYSGLDGDDGLSGEIGEEGRAGTPGEQGFMGEPGIYD ETLSEPLKPGSMGPQGPLGPPGPTGSTGLDGAPGLPGIVGLPGLPGIKGLPGRQGVMGIS PKGEPGNDGFKGLPGQRGPQGSPGLIGPMGPKGFKGATVIGPYGEDGTPGTDGSPGLRGE RGDNGVMGPPGFPGRGVHGVGPPGEDGPPGPPGITGDPGIPGRPGLHGARGEQGDDCPVC KSGLPGPKGQRGDDGFSGQKGFPGYEGLPGPRGMKGLPGYPGIPGQKGVKGNKGQSGMAG PQGLRGRKGRLINPPYALTLAEKGPQGPLGFLGDAGLPGDAGWPGPPGDYGLPGLKGMTG NDGLPGFPGRNGTHGRDGAPGWPGRNADVPYAFLTGQKGEQGIKGERGEPGDDGLKGESG DAIGSEINSKGSKGNIGPFGPEGLRGRKGEMGERGYDGIPGLRGDIGDTGVSLQGPEGSR GFPGEKGDIGPFGEPGNPGPRGMDGFSADKGKKGSRGEVGLAIIYGERGIDGLPGEMGDV GEPGYPGSPGIGGPMGPKGETGIAGDVGPQGPQGPLGRKGMSGIILQGAPGMPGHPGFMG SIGAIGEPGLQGYNGLPGDVGPKGTKGEFGAIGFRGATGERGTVGFPGVPGLMGIPGNDG QAGDRGEMGGQGYPGQPGRTGLIGLHGDKGKTGDFGQPGYPGLDGLPGIKGKRGDKGFAG LQGLKGEDALTGMRGDVGEPGQNGDSGRPGLYGLNGEKGDQGDSGLNIKGFDGVKGQRGS SGIPGFTGVKGIKGPIGERGVPGYYGQIGDKGFPGFPGLPGRHGFDGFKGEPGPIGIPGE SGISGDIGMEGEPGKMGAPGIPGDIGLPGLKGVTGPPGVKGIPGDIGPRSFSPATKGDIG DFGMEGFLGSKGQTGEPGFTGRTGIKGEQGDYGAKGEIGFQGEQGPKGFIGEVGPPGLPG LDGINAERGESGLPGKDGLPGWPGNMGQKGAPGDFGVDGPVGQPGQPGLSFRGPKGMSGM DGRPGRRGNVGIPGARGMEGQPGFRGLKGYVGEPGFAISPKGETGAPGQPGFFGIKGERG ETGEFGRDGYPGSQGLKGLKGVMGAIGRAGLPGYPGRKGIKGDKGDVVLPSEVNPGPPGE PGPLGYEGLPGLSGKPGDFGENGIPGMKGVLGDTGRIGLPGVRGPQGERGQIGLKGTVGL DGLPGKPGPQGVPAPPPPIPKSRGFYFTVHSQSRMIPHCPAGTTPMWDGFSLIHIIANAK AHGQDLGAPGSCLRRFSTMPFMFCNLNDVCNFAQREDYSFWLSTPEPMPMAMTPIQARDV GSYISRCQVCESPTRAIALHSQSSTPPSCPNEWEELWVGYSFLMHTAGPDASGQSLISPG SCLQDFRTRPFIECNGLGRCNYFATAISYWLSTIEDNKMFSRPVQQTLKVDQISKISRCV VCKRRNPGPSTGYASRPAGVEAVPNAVVRRPLPHRPRYRPNYGRYRGRRRHNVK NT seq 5385 nt NT seq  +upstreamnt  +downstreamnt atgtcgggcccggcgcgtgcgcgcctttttgtgcccgtttctcttcttctcctatggata ccgactcaaacaacagctgttgtctgcaatcaaacacgatgcgattgtactggattaaaa ggagacagaggtgatccgggccctccgggtatacccgggatactaggagaatatggagat gatggcccagagggtcgtatgggtattatgggggagttaggggacttaggtgaaagagga gacgcaggtgacaagggtgaaagggggtcagatggaccatacggaccacgaggatatact gggccacagggtccaccaggattcgagggtatcagaggagtatttggattggatgggtgt agtggagttgatggtgcaataggcctaccaggtccccagggaattcctggtgatagaggt ctaccaggtccatacggagagaaaggagcccagggtttagcaggtgaaggaggtgtaaac tcacaaggtgcaaaaggagttcaaggtgactttggtcgtcatggagctccaggccctcct ggtccaacgggttggataggagatagtggaccacgaggagaaacgggagatcagggacca atgggaatccctggtgtgccagggtacagaggtgacactggtgaagatgtagtaggttca cctggtgaaaaaggagatcaaggcgaagttggagatcctggaagaccagctcaagtggtt tacatccaacaagtacagcaaaatataacaattttagccaaaggtaatagaggagatcgg ggtccaagaggtcaacagggagtcaaaggcataaaaggagaagttggttcgactggaaga ccgggaccatatggtttacatggtgctcaaggatataaaggtgaccaaggagaaaatggt ccaagaggaaagccaggtgtgagaggtgcaataggtccagctgggcctaaaggtgataaa ggagcaccgggctactcgggcttagacggtgatgatggactatcgggtgaaataggagag gaaggaagagccggtactcctggtgaacaaggtttcatgggagagcctggtatatacgac gaaacattaagtgaaccattaaaaccaggttctatggggcctcaaggacctctaggtcct cccggtcctacgggaagtaccggcctcgacggcgctcctggactacctggtatagtaggt ctgcctggattaccaggtataaaaggtcttcctggtcgtcaaggtgtgatgggtatatct cctaaaggtgagccaggaaacgacggatttaaaggtttaccaggacagcgaggacctcaa gggtcacccggattgataggtcctatgggtccaaaaggttttaaaggggctacagtcata ggaccttatggtgaagatggtacacctggtactgacggttcaccaggattaagaggtgaa agaggtgataatggtgtcatgggtccacctggttttcctgggcgaggtgttcatggggtt ggtccaccgggagaagatggaccgcctggtccacctggtattactggtgatccaggcata cctggacgaccaggtcttcatggcgcaaggggtgaacaaggagatgactgccctgtctgt aaatccggtcttcctggtcctaagggacaaagaggagatgatggcttttctggtcaaaaa ggattccctgggtatgaagggttacccggcccccggggtatgaaaggtttaccaggatat cccggcattcccggtcaaaaaggagtgaaaggaaataaaggtcaatctggaatggctgga ccacaaggattacgagggcgaaaagggcgtttaataaatccaccgtacgcattgacttta gctgaaaaaggcccacaaggacccctaggatttttgggagatgccggtttaccaggagat gctggatggcctggaccacccggcgactatggtctgcctggtcttaagggcatgacaggc aacgacggtctgcctggttttcctggacgcaatggtactcacggtcgcgacggagcacct ggatggcctggtcgaaacgccgatgtaccgtacgccttcttgacgggacagaaaggagag caaggcataaagggtgaacgtggagagcccggtgatgatggtttaaaaggagagagtggg gacgctatcggttcggagattaactcaaagggttcaaaaggaaacatcgggccatttggt ccagaaggattgaggggtagaaaaggtgaaatgggtgagaggggatatgatggaatacca ggattaagaggtgacataggtgacactggtgtgtctctgcaagggcctgaaggaagcaga gggtttcctggtgaaaagggagatataggtccatttggagagcctggtaatcctggtcca cgaggtatggacggatttagcgcagataaaggcaaaaaaggttcaagaggtgaagtgggg ttggctatcatctatggagaaaggggtatagatggtttacccggtgaaatgggagatgtt ggtgaaccaggttatccaggttccccaggtattggagggcccatgggacctaagggtgaa actggaattgccggtgatgttgggccccaagggccgcagggacctttaggtcgtaaagga atgtcaggcattatactacaaggagctcctggtatgcctggacatcctggatttatgggt tccatcggagctattggagaacctggtcttcagggttacaatggattgcccggagacgta ggtccgaaaggaactaagggagagtttggagctattggttttagaggtgcaactggagaa cgtggtacagtaggctttcctggagtcccaggattaatggggatacccggtaatgatggt caagctggcgatcgtggagaaatgggtggtcaaggatatccgggtcagcctggtagaact ggattaattggtttacacggtgataaaggaaaaaccggtgattttggtcaaccgggctat ccaggacttgacggtttacctggaattaagggcaagagaggtgataaaggttttgcgggt cttcagggattaaaaggagaagatgcattgactggaatgagaggcgatgtaggagaacca gggcaaaacggagattctggacggcctggactatatggtttaaatggggaaaaaggtgat caaggcgattctggcttaaatataaaaggctttgacggcgttaaaggtcaaagaggtagt tcaggtattcctggattcacaggcgtcaaagggattaagggacccataggtgagcgaggg gtacctggctattatgggcaaattggagataaaggttttccagggtttccaggtttgcca ggacgccatgggtttgacggtttcaaaggagaaccgggccctataggtattcctggcgaa agtggcatttcgggtgacattggtatggaaggtgaacctggtaaaatgggggctccagga attccaggtgacataggcttgcctggattaaaaggtgttacagggcctcctggggtaaaa ggaataccaggagatattggtcctaggtcattctctccagccactaaaggagacattgga gactttggtatggaaggttttctgggatcaaaaggacaaactggtgagcctggttttact ggaaggaccggtataaaaggcgaacaaggtgactatggtgctaaaggtgaaatcggattc caaggagaacagggtccaaagggatttataggtgaggttgggcctcctggactacctgga ttagatgggataaatgctgaaaggggggaatcaggcctacctggaaaagatggattgcct ggttggcctggtaatatgggtcaaaaaggagctcctggtgactttggggttgatgggcca gttggccaacctggacaaccaggacttagttttagagggcctaaaggaatgtcaggaatg gatggacggccaggaaggcgcggtaacgtgggtatacctggagcacgaggcatggaaggt caaccaggctttcgaggactgaaaggatacgtaggagaaccaggtttcgctataagccca aaaggcgaaacaggtgcccctggacaacctggtttcttcggtattaagggagagcgagga gaaacaggagaattcgggcgggatggttatccaggctcgcagggacttaaaggattaaaa ggagtaatgggtgcaatcggtagagccggtcttcctggatatcccggaagaaagggtata aaaggtgacaagggagatgttgtcttaccgtcggaagtgaatcccggtcctcctggtgaa ccagggccgttaggttacgaaggacttcctggtctcagtggtaagcccggagactttggt gaaaatggtataccaggaatgaaaggagtgttaggagacactggtagaattggattacca ggggtgcgcggtcctcagggggaacggggtcaaataggacttaagggtactgtaggtctg gatggcttacctggtaaaccgggccctcaaggagtacctgcacccccacctccgatacca aaatcgcgtggattttacttcacggttcattcacaatctagaatgataccccactgtccc gccggcacaacaccaatgtgggatggattttcacttatacatattatagccaacgccaaa gcacatggacaagacttaggtgctcctggaagctgccttcgtagattctcaactatgcca tttatgttctgcaatcttaacgacgtatgtaatttcgctcaaagagaagattacagtttc tggctttcaacaccagagcccatgccgatggctatgacgcccatccaagcgagggacgtc ggatcatatatttctagatgccaagtttgtgaatcccctacaagagctatagccctgcac agtcaaagtagtacaccaccctcttgtcccaacgaatgggaggaattatgggtgggatac agctttttaatgcatacagctggcccagatgcgtcaggtcagagtctgatatcgccaggt tcctgtctccaggacttcagaacacgtcccttcatagagtgcaatggccttggaagatgt aactatttcgctacagccatctcctactggctatctacgatcgaggataataaaatgttc tcacgcccagtacagcaaacactaaaagttgatcaaatatccaaaatcagcagatgtgta gtgtgcaaacgacggaatccgggtccatcgacggggtacgcctcacggccagctggagtt gaggccgtacctaacgcagtcgtgcgcaggcctttgccccacagaccacgataccgcccc aactatggccgctaccgtggacgacgccgacacaatgtgaaatag

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