Pieris rapae (cabbage white): 110999849
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Entry
110999849 CDS
T05162
Name
(RefSeq) DNA polymerase subunit gamma-1, mitochondrial isoform X1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110999849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prap03032
]
110999849
03029 Mitochondrial biogenesis [BR:
prap03029
]
110999849
Enzymes [BR:
prap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
110999849
DNA replication proteins [BR:
prap03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
110999849
Mitochondrial biogenesis [BR:
prap03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
110999849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
110999849
NCBI-ProteinID:
XP_022124790
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Position
6:complement(95736..104702)
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AA seq
1144 aa
AA seq
DB search
MPLKNTGKVNHKTSQACIQFIKYYSRDVLPMSEVKLIKNKNNTHSKSDKTSEKAMRDSEE
LRVNDVNIQMISKNIYDQLFSQSHARVDSNVIKSCQNHLLHHGIDYNNFTRLPDVQLKLP
QLEGSDIVQHFYNIGEKQCAPYRTLMHHLAKSRIPQPPQVWSKNAGWTKYTDQGAQSVPC
PQDDSLIFDVEVLMSAGKRPTLASAVSPEAWYSWVSEPLASDKSHEHCSEVNYADLIPME
TDGLTPCGDLTRARIIVGHNVSYDRAKIKEQYWMDRTGVRFMDTMSMHTCVSGVTSYQRT
VLKAKNKEPDPTDEDWIGISSLNSLTEVHKLYCGVAVDKQKRDVFVEGRLEDVRRHFQAL
MSYCAADVIATHNILKELLPLFLERFPHPVTLAGMLELGSAYLPVNSNWTQYVDSAEAVF
DDYKLESQQLLTLKADEACRLMDNEAYKKDLWMWDQDWSTQILKLKKSKGKYSYRFEPNN
RTPKEKQTYEESDTLSLDYIETLDKAEEMKEAKDKFEDFTNKFKYLFDLKAMLPVKRPHL
AGYPTWYRKLCTKPGRDPDWVPGANNITTSMQITPKLLRLSWEGYPLHHIPGEGWGFLVP
FSRSRGDIPEGHPRIPLEGLLETCPLANCKEAELNTEHYVLPKTVEEDLSRRAYFARKAK
EERAAANQYHGLGVWTGLEIQGCCHFLRLPHKDGPKYKVGNPLARDFLDMFSQNVLSAQG
NDAEKVLTFGRMMSYWRNNRERVMGQQVVWLPRECLPGHLRSSLRRFGAIVPQVVACGTL
TRRASEPTWMTASNARPERIGSELRAMVQAPPGYRFVGADVDSQELWIAALLGDSGLGVC
GGTAFGWAVLAGDKRSRSDLHSLTASAANINRDHAKVINYARIYGAGQNFAERLLKQFNP
TMTISEAKSKAAKMFTTTKGRRVYTLHEKYSTGLLDPDDCQQVVKMSGRDAARLAKMSGK
RLDEMFGRARWVGGTESEMFNKLEEIADTDAPRTAFLGGRLSRALEMAGGKWSGTRLNWA
VQSAAADFLHLMLVSMTHLAPEARFCLSFHDEVRYLVPEKYKYDTALALQITNLFTRAFC
SQRVGIRDLPMSVAFFSSVEVDRVLRKDSNQSCVTPSNPHGLENGYGIPDGESLTIFDIL
KNVK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaaaaataccggaaaagtcaatcataaaacatctcaagcttgtattcagttc
ataaaatattatagtcgagatgtcctccctatgagtgaagtaaaattaataaaaaataag
aataatacacactcaaaatccgacaaaacctccgagaaagctatgcgagattcagaagaa
ttgagagtaaatgatgttaatatacaaatgatatctaaaaatatttatgaccaattattt
agtcaatctcatgcaagggtagacagtaatgtgataaaaagttgccaaaatcatctttta
catcatggaatagactacaataattttactaggcttcctgatgttcaattaaaactgccg
caattagaagggtcagatattgttcaacatttttataacataggagaaaaacaatgtgct
ccatataggacattgatgcaccatttggctaagagtaggattccacaaccacctcaggta
tggtccaaaaatgcaggttggaccaagtacactgaccagggagcacaatcagttccatgc
ccacaggatgatagcttaatttttgatgtggaagttctgatgtcagctggtaaaaggcca
acccttgctagtgctgtttcacctgaagcttggtatagctgggtgagtgagcctctcgca
agtgataaatctcacgaacattgctctgaagtgaattacgctgatttaataccaatggag
accgatggtttgacgccatgtggcgatttaacgagagcaagaattatagtgggtcataac
gtttcctatgatagagccaagatcaaagagcagtattggatggaccggacaggcgtacga
ttcatggacacgatgtctatgcacacatgtgtcagcggtgtgaccagctatcagaggaca
gtgctgaaggccaaaaataaggaacccgaccctaccgacgaagactggatcggcatcagc
tcgctgaacagtttgactgaggtccacaagctgtactgcggcgtcgcagtggataaacag
aaacgcgacgtgttcgtggagggcaggctggaggacgtgcggcgccacttccaggcgctg
atgagctactgcgccgccgacgtcatcgccacacataacattctcaaggagctgctgccc
ttgttcctcgagcgctttcctcaccccgtcactttggccggcatgctggagctaggttcg
gcttatctaccggtgaattctaactggacacagtacgtcgattcagcggaagcggtgttc
gacgactataagctcgagtcgcagcaattgttaacattaaaagcggatgaagcgtgtcgc
ctcatggataacgaagcctacaaaaaagatttatggatgtgggaccaagactggtcgacg
cagatattaaaattgaagaaatccaaaggcaaatacagttatcgttttgagccaaacaat
agaacaccaaaagagaaacagacgtacgaggaatctgatacgttatcgttagattatatc
gaaactttggataaggccgaagaaatgaaagaagctaaagacaaatttgaggatttcaca
aacaagtttaaatatttgttcgacttaaaagctatgttgccggtaaaaaggcctcacttg
gccggatacccaacttggtacaggaagctgtgcacgaagccaggcagagatcccgattgg
gtaccgggagccaacaacatcacgactagtatgcagattacaccaaagcttcttcgccta
tcctgggaaggatatcctcttcaccacattccgggagagggatggggattcctcgtccct
tttagcaggagcaggggcgacatcccggaaggacacccccggatccctttagaaggcttg
ctggaaacctgtcctttggctaattgcaaggaggccgagctcaataccgaacattacgtt
cttcccaagacggtggaggaggacctgtcgaggcgggcgtatttcgcgagaaaggccaaa
gaagagcgagcggccgccaatcagtatcacggcttaggcgtgtggactggactcgaaata
caagggtgttgccatttcctgcgtctgcctcacaaagacggccccaagtacaaagtgggt
aatcctctggctcgggacttcctcgacatgttcagtcaaaacgttctgtcggcccaggga
aacgacgcagagaaggtcctgacgttcgggcggatgatgtcgtactggcgtaacaatcga
gaacgagtgatgggacagcaggtggtgtggctacctcgggagtgtcttccggggcacctg
cggagctcgcttcgcagattcggtgccattgtgccgcaggtcgtcgcctgtggcaccctc
accaggcgggccagcgagccgacgtggatgaccgcgagcaacgcgcgaccggagcgcatc
ggatcggagttgcgagccatggtgcaggccccgcccggctatcgcttcgtcggcgccgac
gtggactcgcaggagctgtggatagcagctctgctcggcgacagcggcctcggcgtctgc
ggcggcacggccttcggttgggcggtgctggccggcgacaagaggtcgcggtcggacctg
cattcgctgaccgccagcgccgcgaatatcaaccgagatcacgccaaggtcatcaattac
gcgaggatatatggtgccggtcaaaacttcgcggaacgacttcttaaacagttcaatccg
acgatgacaatttcggaagcgaagagcaaagccgccaaaatgttcaccaccaccaaaggc
cgacgggtctacactcttcacgagaaatattctaccggcttgttggatccagacgactgc
cagcaggtcgtgaaaatgtccggccgagacgcggcgcgcctcgcgaagatgagcggcaag
cggctcgacgagatgttcggtcgggcgcgatgggtgggcggcaccgagtccgaaatgttc
aacaagctggaggagatcgcggataccgatgctcctcgcactgcgttcctgggcgggcga
ctttcccgcgctcttgagatggccggtggcaagtggagcggtacccgcctcaattgggcc
gtgcagagcgccgccgcggacttcctacacctgatgctcgtcagcatgacgcacttggcg
cccgaggccaggttctgcctaagtttccacgacgaagtccgatatctggtgcccgaaaaa
tataaatatgacaccgctctggcgctgcagataaccaatttgttcacgagagcgttttgt
tcgcagagagtaggcataagagacctcccgatgtcggtggcctttttctcatccgtggaa
gtagacagagtgctacgaaaagattcaaatcaaagctgtgtaacgccgtcgaacccccac
ggcttagaaaatggatatgggatacctgatggcgaatctcttaccatttttgatatactg
aagaatgtaaaatag
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