Pieris rapae (cabbage white): 111000106
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Entry
111000106 CDS
T05162
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
111000106
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111000106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_ECM29
HEAT_2
TPR_Trm732_C
HEAT_EZ
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
111000106
NCBI-ProteinID:
XP_022125143
LinkDB
All DBs
Position
10:complement(2544666..2578542)
Genome browser
AA seq
1848 aa
AA seq
DB search
MTSRLDRLFVLLEAGTGPATRRAAARQLGEVQKAHPEELHRLLARLMKHFRSPAWETRIA
ATQAVEAILSNVPEWHPNFTGCKEEDQKEEEGLSLLRCETFDIERVLEHGAHLMGSEGHE
YEMEEEPQSAAEMQERLAKQRQQLNARLGLDMAATLGVDLTSVYTNEDLCPVKIEKPNKT
NVVRRPIQEVLPTKALSSREMNVAKRKARAAFSKQKSRDCSERDETMPPEEPDKKKIKMD
PVEDYIFDSGAGVPERGGGWGDCTRWPLEGWCGALQTQLFSGAWEARHGAASALRELLKA
PLAASAYAARSRIPETPEQLEEWHHEWLEDMALRLLCVLALDRFGDFVSDQVVAPVRETC
AQTLGVTLAQMRAPRVKAVAERVAALASQKQWEARHGALLAFKYLLAARQEVAVDSGALE
HLIAGLDDTAEDVSAVAAGALVPAAHALARSRPDGVPRLAARLWQLLHEQDDLASPANCY
MALLAALMALPTAAILLHPIDLADVLPRLWPYLDHSTSSVRKATLQTLRTLTKPLVITNG
HNEMRESADESEWLAWTPELLQATMRHIYQRILFEHVHEIQEIALQVWENLLRFASLSVI
LVAACPMLATWMCLAMQPAKLPVEPDLLLYTPPKERRPRTTSQSSLGECEESNDTRPSQK
WLLGGSETQPGALRERNVTRARVLAAKVLGYLSCYLVQPAPGIEYKVEDESPIDCYTKVM
VVYLRGGSALQRTVASLVISSWATHTVKYKLFPPDMRDDTQAANDNDVSKLAPPLLVSTL
HTALNQVLYYDEVALNCNRILQEARDLLAMMKHYKLAVGEEFNNILRLEQVAQMTTVTER
LIAGMKIKRVSSSLEERRAALHTAVTQCSIDQSALNISVQAAVSGAVATLRVLPEKLNPV
VRPLMDSIKRETSEELQAASAQTLAHLLATLQPRESCPNNKVLVNLKAFLRCDPEFTPRI
SLDILEKAEGDSGSGDSGAENKEEHASQLPPLDKYNGIVTLREQQRSAERVVPRRGRPPA
NNAPIELGLEQLFPNEDQARKLLRIQRRGAMMALTSLAEYFGDDLPEKLPKLWEFITEPF
EKVLTDAELESMEVEVGDELISRLQVVEAVCGVLGKGAWSQVAGGVQACAALTRSPYTAL
RHMAARGLAAMAKREPHVVMDVLIQELIESLSEGSECVRCGAAESLARLVDTLQLQLVPY
IVLLLVPLLGRMSDHNESVRVMSTRCFATLIQLMPLDGAVPEPPNLSPELKARRQRDRTF
IDQLFNPKSIKDYKIPIPVSAELRSYQQAGVNWLRFLYEYKLHGVLCDDMGLGKTLQSIV
VVAGSHYERAQSGAPSLPSLVVCPPTLTGHWVFEVNKFISTKYLKPLQYVGPPVERERLR
GHVRRYNLIVASYDIVRKDIDFFSSIKWNYCVLDEGHVIKNGKTKAFKAIKQIVANHRLI
LSGTPIQNNVLELWSLFEFLMPGLLGTSRQFTARYSRPILQARDPRATPHHLQAGALACE
QLHRQVLPFLLRRVKEEVLRELPPKITQDYYCDLSPLQKSLYEHFSKRHMTPDAAHSRKH
VFQALHYLQNVCNHPKLVLNPEHPEWTRVQKQLASQRSTLNDISHSAKLPALKQLLLDCG
IGVANSESGDAEGTEGELCRVVSPHRALIFCQLKGMLDIVERDLLRSHLPTVSYLRLDGS
VPAHLRHDIIARFNSDVSIDLLLLTTSVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRA
HRIGQKNVVNVYRLVTRDTLEEKIMGLQKFKLKTANTVISSENAAMETMGTDQLLDLFQQ
SGNPGTSSNASSTSKPLLETLPELWDDKQYEEEYDMSNFIRSLNQFKD
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaggttggaccgtctcttcgtgttgctggaagctggcaccggtccagcaact
cggcgcgctgcagctaggcaactgggtgaggtgcagaaggcacacccggaagaactccat
cggctgctggcaaggcttatgaagcactttcgttcgccagcatgggagactaggattgct
gctacgcaggcagttgaagcgattctatcaaacgtcccggaatggcatccaaatttcact
ggttgtaaagaagaagatcagaaagaggaagagggactcagtcttctacgatgcgagaca
ttcgacatagagagggtgttggaacatggcgctcatcttatgggctccgagggacatgag
tacgagatggaggaagagcctcaatcagcagcagaaatgcaagagcggttagcaaagcaa
cgtcagcagttgaatgctcgccttggtctagatatggcggcgaccttgggtgtcgatctc
acctcagtttacaccaacgaagatctctgcccagtcaaaattgagaagccaaataagacg
aatgtcgtgaggaggccaattcaggaggtgcttccaacgaaggcgttaagttctcgagag
atgaatgtagctaagcgcaaggcgcgagcggcttttagtaagcaaaagtcgagggattgc
agtgagagggatgagacgatgccccctgaggagccagataagaagaagatcaaaatggac
cccgttgaggattatatctttgacagtggcgccggtgtccccgagcgtggtggtgggtgg
ggtgactgtacgcgctggcctctggaaggctggtgtggggcattgcagacccaactgttc
agtggggcgtgggaagcccgccatggagcagcatccgctctaagggagctcttaaaggca
cccctagctgcatccgcgtacgctgctcgctcgcgtatacctgagacgcccgaacagtta
gaagaatggcatcacgaatggttggaggacatggcgttgcgtcttctctgtgtgctggct
ttggaccgatttggggattttgtctcggaccaggtggtagccccagtacgagaaacatgc
gcgcaaacattaggggtgacactcgctcagatgcgcgcgcctcgtgtgaaggcagttgcg
gagagggtggcagccctagcctcgcagaagcaatgggaggcaaggcacggggctttattg
gctttcaaatacttgttagctgctagacaggaagtggctgtagatagcggagccctagaa
cacttgatagctggtctggatgatacagctgaagatgtgtcagctgtggcagccggtgct
cttgtcccagcggcgcacgcgttggcccgaagtcggcctgatggtgttccgagattggca
gcacgactgtggcagttgctgcatgagcaggatgacctggcgtcgcccgccaactgttat
atggcactgctggctgcattgatggcgctgcccaccgctgctatccttttacaccctatt
gatctcgcagacgtccttccacggctatggccatacctcgaccattccaccagttcggtt
cgtaaagcgacacttcaaactctccgaacgttaaccaaacctctagtcatcacaaacggt
cataatgaaatgcgtgaaagtgcagatgaaagcgaatggctggcctggacaccggaattg
ctgcaagccactatgaggcacatttatcagcgaatactgttcgaacatgtccatgaaatt
caagagattgctttacaggtgtgggaaaatttgctaagattcgcgtctttgagtgtgatc
ttagtagccgcttgtcccatgttggccacttggatgtgtctcgctatgcagcccgctaag
ttgccagtggagccagatttgctcctatatacacctcccaaagagcgtcgaccccgtact
acctctcagtcgtccctaggcgagtgtgaagagagcaacgatactcgtccgtctcagaaa
tggttgttgggcggtagtgagacgcaaccgggtgcgttgcgcgagcgcaatgtgacacgc
gccagggtacttgctgccaaagtcttaggttatttatcgtgttatctagtccagccggcc
cccggcatagagtataaagtggaagatgaaagtcctatagattgttatacaaaggtgatg
gtggtataccttcgcggaggcagtgcccttcagcgtacggtggcgagtctggtgatatcg
tcttgggccactcatactgtcaaatacaagctatttcctcccgacatgcgagacgataca
caggcggcaaacgacaatgacgtgtcaaaacttgcgccgccattactggtgtcaactttg
cacacagccctcaatcaagtgctgtactatgacgaagttgcgttgaattgtaataggatt
ctccaagaggctcgcgatttgctagcaatgatgaagcattacaaattggcggtcggagag
gagtttaataatatacttagattggaacaggtggcacaaatgacgacagtgactgaacga
ttaattgcgggaatgaagatcaagcgagtctcttccagtctggaagaacgtcgagcggcg
ctgcatactgccgtcacccagtgctctatagaccagagcgcattgaatatatcggtccaa
gcagcagtgagcggtgcagtggcaacactccgagtgttgccagagaagctaaatcccgtg
gtccgacctttgatggacagtattaagcgggaaacgtcagaggaactgcaagctgcgtct
gcgcagacattggcgcatttattggcaacccttcagccgagagagtcctgtcccaacaac
aaagttcttgttaacttaaaggcttttttacgatgcgatccagagtttacgcctcgaata
tcgctggatatattggagaaggccgagggtgattctggtagtggcgatagtggtgccgag
aataaggaagagcatgcgagtcagctgccgccattggacaaatacaacggcatcgtgacg
ttacgcgagcaacagcgaagtgcggagcgcgtagttccaagaaggggtcgtccgcctgca
aacaacgcgcccattgagttgggccttgaacaactctttcctaacgaagatcaggctcga
aaattgcttcgcattcaaaggcgaggcgcaatgatggctctaactagtctggctgaatat
tttggcgatgatctgccagaaaagctacccaagctctgggagtttattactgagccattt
gagaaagttctcactgatgccgaacttgagagcatggaagtagaggttggtgacgaattg
atatctcgtcttcaagtggtggaagcagtttgcggcgtattagggaaaggggcgtggtcg
caagtggcgggcggggtccaggcgtgtgctgccctgacacggtcgccttacacagccctg
aggcatatggcagcaagaggcctggctgcaatggctaaaagagaaccacatgtcgtcatg
gatgtgcttatacaagagttaatagaatcgctgagcgaaggcagcgagtgcgtccgttgc
ggggcggcggagtccctcgcgaggttggtcgacacgctgcaactgcaactggttccttac
atcgtcctattattggtgccgttattaggccgtatgagcgatcataacgagtccgttcgc
gttatgtcgacgcgttgcttcgccactctcatacaacttatgcccttggatggtgctgtt
cccgagcccccaaatttatcacctgaactgaaagccagaagacaacgcgaccgtactttt
atcgaccagctcttcaaccccaagtcgatcaaggactataagatacctataccagtgtct
gcagagcttaggagttatcaacaggctggtgttaattggttacgattcctgtatgagtac
aagcttcatggagtactatgcgatgacatgggtttgggaaagacgctccaatcgatcgtg
gtggtggcaggatcgcactatgagagagctcaatcgggtgcaccttcgttgccttcacta
gtcgtgtgtccgcctacacttactggccactgggtattcgaagtgaacaaattcatatca
acgaaatacctgaaaccgttgcagtacgttggtccgcccgttgaacgagaacgtctacgc
ggacacgtacgtcggtacaaccttatcgtagcctcatacgatatcgttcgaaaggatatt
gatttctttagctcgattaaatggaattattgcgtgcttgatgaaggacacgtaattaag
aacgggaagacgaaagcgtttaaggccatcaagcaaatcgtcgctaatcaccggcttata
ctgtccggaactcctattcagaacaacgtcctggaactatggtccctcttcgaattcctg
atgccaggtcttcttggaacgtctcgtcagttcacagcccgatactcccggcccatcttg
caggctcgggaccctcgagctacaccgcatcacttgcaggccggggctctagcatgcgaa
cagctgcatcgacaggtgctaccgtttctcctccgtcgcgtcaaagaagaggtgctccgc
gaattaccaccgaagatcactcaggactactattgtgacctcagccctctgcaaaagtct
ttgtacgaacacttttcgaaacggcacatgacacccgacgccgcacattcaaggaaacac
gtgtttcaggctttgcactatttacaaaatgtatgcaaccatcccaagttggtgctgaat
ccggaacacccggaatggacgcgggttcaaaaacaacttgcctcacaacggtccacactc
aacgacatctcgcacagtgctaaactacccgcacttaagcaattacttcttgactgcggc
atcggtgtagcgaattcagaaagcggcgacgcagaaggaacagaaggggaactgtgtcgc
gtggtctctcctcatcgcgccctaatattctgccaactcaagggcatgttagatatcgtc
gaacgagatcttttgcgatcacatcttccaactgtgtcgtacttgaggctggatggatcc
gtgcctgcgcatctccgacatgatatcatcgctaggtttaatagcgatgtctctattgat
ctactactgctgacaacaagtgtcggtggtctcggtctaaacctgacgggagcggatacg
gtgatatttgtggagcacgactggaaccccatgaaggaccttcaggccatggatcgggcg
catcgtatcggtcagaagaacgtcgtcaacgtatatcgcctcgttactagagacacgctc
gaagaaaaaataatgggcttacaaaagttcaagctgaaaacggccaacacggtcatcagc
agtgagaatgcagccatggagacaatgggtaccgatcagctcctcgacctgtttcagcaa
tccggaaaccctggtacttccagcaatgccagcagtaccagcaaacccttgctggagact
ttgccagaactctgggatgataagcagtatgaagaggagtatgatatgagcaatttcatt
cgcagtctcaatcagtttaaagattaa
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integrated database retrieval system
