Pieris rapae (cabbage white): 111000234
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Entry
111000234 CDS
T05162
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
111000234
Transcription factors [BR:
prap03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
111000234
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
111000234
NCBI-ProteinID:
XP_045485566
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Position
9:complement(9855478..9875967)
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AA seq
253 aa
AA seq
DB search
MLGGPEWGQREATPPRDAPLPSFGFTQEQVACVCEVLQQAGNIERLGRFLWSLPACERLH
AHESVLKAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWLKAHYMEAERLRGRPLG
AVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYLHNPYPSPREKRELAESTGLT
TVQVSNWFKNRRQRDRQAEHKDSGGPGDKQLDSSTDDDSDAPHVTPAHLTSAPPIYPHAL
YEHPLAHLPYHHS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggcccggagtggggccagcgggaggccacccccccaagagatgcacccctg
ccgagttttggcttcacacaggagcaggtcgcgtgtgtatgtgaggtcctccaacaagct
ggcaacatcgagcgtttagggcgtttcctctggtccctgcctgcatgtgagcggctccat
gcgcacgagtcagtgttgaaggctaaagcaatggttgctttccatagaggcaacttcaag
gagctttacagattgctggagtcacataactttagtgcccacaaccatgctaagcttcag
agtttgtggttaaaagcacattatatggaggcggagaggcttcgcggacggcccctcggc
gccgtcggcaaatatcgggtgcggcgtaaatttccacttccccgcactatttgggatgga
gaggagacatcttattgttttaaagaaaaatcgagatcagtacttcgggactggtatcta
cacaatccgtacccatctccgcgagaaaaaagggagttagctgaaagcaccggactcaca
actgtacaggtttcaaattggtttaaaaacagacgacagcgggacagacaggctgaacac
aaagatagtggcggtcccggcgacaagcaactagactcttcgacagatgatgacagtgac
gcgccacatgtcactccagcgcacttgacgtcagcaccccctatatatccacacgcctta
tatgaacaccccctagctcacctgccgtatcaccattcgtga
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