KEGG   Pieris rapae (cabbage white): 111000312
Entry
111000312         CDS       T05162                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap00565  Ether lipid metabolism
prap01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:prap00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    111000312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prap03036]
    111000312
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:prap04147]
    111000312
Chromosome and associated proteins [BR:prap03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111000312
Exosome [BR:prap04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111000312
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EML Beta-prop_Nup120_160 WD40_RFWD3 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 LisH Ge1_WD40 Nucleoporin_N eIF2A Beta-prop_WDR35_TULP_N PROPPIN RMC1_N Beta-prop_WDR11_2nd Beta-prop_NUP159_NUP214 Pox_A_type_inc
Other DBs
NCBI-GeneID: 111000312
NCBI-ProteinID: XP_022125401
LinkDB
Position
4:complement(2973015..2998049)
AA seq 411 aa
MKMVLSQRQREELNKAIADYLGSNGYTDALEAFKKEADMTGEMDRKFGGLLEKKWTSVIR
LQKKVMELESKLSEAQKEFIEGAPTRAKRTPTEWIPRPPEKFSLTGHRATITKVIFHPVF
SLLVSSSEDATIKVWDFENGDFERTLKGHTDSVQDIAFDHSGKLLVSCSADMSIKLWDFN
QTFECVKTMHGHDHNVSSVSFSPSGDIVYSASRDKTIKAWEVATGYCVKTYKGHREWVRM
VRVSADGSLLASCSNDQTVRIWNADTNECKMELREHEHVVECVSWAPESAAAAVNEAAGG
DNRRANHVGPFLASGSRDKSVKIWDVSTGVCLATLVGHDNWVRGAVWHPGGRYLLTASDD
KTLRVWDVAHTRCLKTLYAHQHFATSLDFHKNLPYVISGSVDQTVKVWECR
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaaatggtgttgtcacaacgacaacgagaggagctcaacaaagctatcgccgactac
ttaggcagcaatggatacacggacgcgctggaagcgttcaagaaggaagcggatatgaca
ggcgaaatggatcgaaaatttggtggcctcctcgagaagaagtggacgtctgttatcagg
ctacagaaaaaagtgatggaactggaatcaaagttatccgaggcgcagaaggagtttata
gagggtgcacctactcgtgctaagcgcacgcccactgagtggatacctcgtccgccagag
aagttcagccttaccggccaccgtgctactattactaaggtaatatttcacccagtgttc
agtttattagtgtcatcgagcgaggacgccaccatcaaggtgtgggatttcgaaaatggc
gacttcgaacgaaccctcaagggtcacactgactctgtacaagatatcgctttcgaccat
tccggaaagctgttagtatcatgcagtgcagacatgtcgattaagctgtgggacttcaat
cagacatttgaatgtgtgaagacaatgcatggtcacgaccacaatgtatcatctgtgtcc
ttttcgcccagcggtgatattgtctactcggccagccgagataagaccatcaaggcatgg
gaggttgccactgggtactgtgttaagacatacaagggtcaccgtgagtgggttcgtatg
gtgcgtgtgtcagctgatggaagccttctcgcatcttgctccaacgatcagactgtgcgc
atctggaatgctgatactaatgagtgcaagatggagctacgtgagcacgagcacgtggta
gagtgcgtctcgtgggcgcctgagagcgccgcagccgccgtcaacgaagcggccggtggt
gacaaccgtcgcgctaaccacgtaggacccttcctcgctagtggctccagggataagtct
gttaagatatgggacgttagcaccggcgtatgcctggcgactctggtagggcacgacaac
tgggtgcgaggtgctgtatggcatcctggaggccgctaccttctgacagcgtctgatgat
aagaccctccgtgtatgggacgtggctcacacacgctgcctcaagactttgtacgcgcac
caacactttgccaccagccttgatttccacaaaaacttgccatacgtcatatcgggcagc
gttgatcagacggtcaaagtttgggagtgtcgttaa

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