Pieris rapae (cabbage white): 111000408
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Entry
111000408 CDS
T05162
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111000408
03015 mRNA surveillance pathway
111000408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111000408
03041 Spliceosome [BR:
prap03041
]
111000408
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111000408
Spliceosome [BR:
prap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111000408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111000408
NCBI-ProteinID:
XP_022125516
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All DBs
Position
12:complement(3133888..3146713)
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AA seq
917 aa
AA seq
DB search
MLMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILKM
EDDVVIDYVNNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPES
FTQQKKEEIKKRMEEQQKDKDKDRDRRRSRSRSRRSRDRRRSRSRSRDRDRSNDRKYRGS
SPRRSRRKSRDRSVPKPPPPVDDIKLPEPEPKENGKSPEKAEDVEVKEEKNERNEELNHS
DVKEENEQTEKKDDKSRSASPARSEKNEKENEEKPAEKNHRESSDRRSSSASSRGSIKKP
TSHKKRHYRSNRDSSTSVSPRRSSRRERSKSRRRGSRRRSIERRERERERERERERERER
ERRRRERDRRDRSRERRRSLERRRRSRSRSRRRSRDRSRDRDRRRSRSRRRSRSVRRSGR
RSRDRRSRDRRSKDRRSRDRSRERRSRDRTKDRRSRDRKSRDRRSTDLIKERLEKSVSIP
RKENLEKLRPVSIERVSLPREETAKVQVSSSSRESSVANDKSASQDDTRAKSVHTSDDDD
FIPIPVLRDYSKSLTRTPSPFVRRQRDFKKSGDEASDKEQEETKVEDVKKKRKPKASESE
SESSEEAPKSKSKAKLKRKDKSSSKRSKKAKKDTSSSDSDSEDSSSSDSEEDRKKKSKKN
AKKKLAKKSRKKRARSSSSESSSEEEVKHKSTKTKQKNIPEESDTDKKSKKRKDSVDHSK
SEKLDPKSKSKKTENSEDSNDDSSESDDKSNKKKNKHESSSDKEQRRKKVDVTKITSPDA
KSKRDEKSTKVKQIDEIKPKSRDESERKGKKREKEESSSDSDQVSKKKARKKASESESES
ESDEPKKKRAKKHKKHSKKHKKHKKHKKTSKKKDDSSESEEAEEEEEGKVNNEDLEKKLR
ERALKSMKKQTSASGSE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgtatacgggaaccagcacagaacaagatacccgcttcagcgataaggagaag
aagcttatgaagcaaatgaagtttggtgattgtttgacacagcaggtggacatgtcaaag
gtgaagcttgacgtgttgaagccatggatcacacagaaaatcacagaaatcctgaagatg
gaagacgatgttgtcatcgactatgtcaacaatcaactggaggaaaagtttccttgccca
aagaagatgcagatcaacctgaccgggtttctcaatgggaagaatgcccggctgtttatg
ggggagctatgggagctattgctgagtgcacaggcgagtgagaatggcatcccagagtct
tttacacagcagaagaaagaagagattaagaaacgcatggaagaacagcagaaggataag
gacaaagacagagacagaaggagatcgcggtcacgctctagaaggtcccgtgatcgtcgc
cgttcaaggtcaagatcaagggatcgagatagatccaatgacaggaagtatcgcggtagc
agcccgcgtcgttctaggcgcaagagtcgtgacaggagcgtaccgaagccaccgccgccc
gttgatgacatcaaattacctgaacctgaacccaaagaaaacggcaagtcaccagagaaa
gctgaagatgtggaggtgaaagaagagaagaacgagcgaaacgaagagctgaaccacagt
gatgtgaaggaggagaacgagcagactgagaagaaagatgacaaatctcgatctgcatct
ccagcgcggtccgagaagaacgagaaggaaaacgaggagaagccggctgagaagaatcat
cgcgaatctagtgatcgaagatcatcttccgcgtcttcacgtggcagcatcaagaagccg
acctcgcacaagaagcgtcactatcgctccaaccgggactcttcgaccagcgtcagcccg
cgacgaagctcacgaagagagagaagcaagtctcgtcgtcgtggtagccgtcgtcggtca
atcgagcgccgagagagagagcgagaacgcgaaagggagagggagcgagagagggaaaga
gagcgcagacgccgcgagagagacaggagggataggtcacgcgaacgtcgccgatcgctt
gaaagacgtagacgttcccgttcacgctctcgacgacgttctagagacaggtcgcgtgat
cgtgatcgtcgtcgctcaaggtcacgcaggcggtcacggtcagtgcgtcggtcgggacga
aggtcacgcgaccggcgatcccgtgacagaaggtcaaaggacagacgctctagggaccgt
tctagggaaaggagatctcgtgaccgtaccaaggataggagatccagggaccggaagtct
cgtgacaggagatccactgatctgattaaggaacgcttggaaaagtcggtttcgatacca
agaaaagaaaacttggaaaaactaaggccagtgtcaatcgagcgcgtttcgttgccacgt
gaggagaccgctaaggtccaagtgtccagttcaagtcgcgaatcatccgtcgccaacgac
aagtcggcatcacaagatgatactcgggcgaaatcggttcatacatcggacgatgacgac
tttattcccatcccggttctcagagattattcaaagagccttacgcgaactccatcaccg
tttgtaagacgacagagagattttaagaaatccggagacgaagcctcagataaagaacag
gaagagactaaggtggaagatgtaaagaagaaacgcaagcccaaagcatcagagtccgaa
agcgaaagcagcgaggaagctcctaaatcaaagagcaaagcaaaacttaaacgcaaggat
aagtccagctcaaaacgctctaaaaaggcgaaaaaagatacgtcatctagtgacagtgat
tctgaagactcgtcttccagtgactcggaagaagatagaaagaagaagagcaagaaaaat
gccaagaaaaagctcgcaaagaaatcccgcaagaagagagcgcgttcttccagctcagaa
tctagctctgaagaagaggtcaaacacaaaagtactaaaactaaacagaaaaacattcca
gaagaatctgacactgataagaaatctaaaaaacgtaaagatagcgttgaccattcgaaa
tcagaaaaattggacccaaaaagtaaatctaagaaaacagaaaattccgaggattcaaat
gacgatagctcggaaagtgacgataaatcaaataaaaagaaaaataaacatgaatcatcg
tctgataaggagcaaagacgtaaaaaagtagatgtcacaaagatcacatcaccagatgca
aagtcaaagcgagatgaaaaatctaccaaggtcaaacaaattgatgaaatcaaaccaaaa
tcgcgagatgaaagcgaaagaaaaggtaaaaagcgtgaaaaagaagagtcgtcatctgat
agtgatcaagtatcgaagaagaaggcaagaaagaaggcttcggaatctgaatccgaatcg
gaaagcgatgagcccaagaagaaacgtgctaaaaagcacaagaaacattcaaagaaacac
aagaagcataagaaacataagaaaacatccaaaaagaaggatgattcgtcagaaagcgag
gaagctgaagaagaggaagaaggcaaagttaataacgaagacttggaaaaaaaactccgg
gaaagagcgcttaagtctatgaaaaaacaaacaagtgcttctggttcagaataa
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