Pieris rapae (cabbage white): 111000566
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Entry
111000566 CDS
T05162
Name
(RefSeq) small conductance calcium-activated potassium channel protein isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prap04040
]
111000566
Ion channels [BR:
prap04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
111000566
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Nsp1_C
SlyX
DUF7310
RasGAP_C
Sec2p
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
111000566
NCBI-ProteinID:
XP_045484260
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Position
5:complement(6779552..6932014)
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AA seq
804 aa
AA seq
DB search
MSVPTTDSTEAITNSGYGSSDETASLLVSGPAVTVIIPNENRSVKPVLQRQDCTTHLRPQ
LSGGPGSEESAASVRVEDGTARSVPDIELQCRDQCERPQTLVSPVAMCSHRGSVTCQLVP
HICNRCRACERRQSTAPMSAFHLARSVSRESVRSGLHYPCGCSSLQAVSACPVIQPPALL
LPTTSNRIIRQSSQPESSACAAHCAHHSHHPSASLRQLREPGDGIAGIAADSLRINGGMR
PFKQLRKPVSTLSIPGTMKAYSGREATEEAGVALVGVHSEYPRFGEERALGGGTYKGGGA
AKHKPNIGYRLGRRKALFEKRKRISDYALVMGMFGIIIMVIENELSSAGVYSKASIYSQA
LKTLISMSTVILLGLIVAYHALEIQLFMIDNCADDWRIAMTWQRIAQIGLELSICAVHPI
PGQYTFTWTTKLANKGGVIGVEVGTIYKQIEVPYDVTLSLPMFLRLYLICRVMLLHSKLF
TDASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEEH
ANLLNAMWLIAITFLSVGFGDIVPNTYCGRGIAVSTGIMGAGCTALLVTVASRKLELTRA
EKHVHNFMMETQLTKKLKNAAANVLRETWLIYKHTRRVKRVDPGRVRTHQRKFLLAIYAL
RKVKMDQRKLMDNANTITDMAKDPFLLQTQNTVYEIVSDMSSRQDSIEERLTSLEEKLST
LQEQVNSLPDMMARCIQQCWERAEQRRNFLHPDAAAVPTPPAVNISPYARTMPPTHGWPA
SPSTVRAHSAPESAGPAPRPPLPS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgccgacaacagatagtacagaagcaattacaaattccggttacggaagcagc
gatgagacggctagtttacttgtatcagggccagcggtaaccgttattattccgaatgag
aacaggagtgtgaaaccagtccttcaacgtcaggactgcactacacatttacgccctcaa
ctctccggcggaccaggcagcgaagaaagcgctgcttcggttagagtcgaagatgggaca
gctagaagtgttcccgatatagaattacaatgtagagaccaatgcgaacgtcctcaaact
ttggtatcgcctgttgcgatgtgttcccaccgcgggtccgtcacatgtcagctagttccc
cacatttgcaatagatgtcgtgcttgtgaacggcgtcagtcaacagcaccaatgtcagca
tttcacctagcgcgatctgtatcacgagaaagtgttagatccggtctacactatccatgt
ggatgtagttctctacaagccgtaagcgcgtgtcccgtaatacaacctccggcgctatta
ctaccaactacaagcaacagaatcattcgacaaagttctcagccggaatctagcgcatgc
gcggcacattgtgctcaccatagtcaccaccctagcgcctctctgcggcagctacgggaa
ccaggagatggaatcgcaggaatcgcggcagactcgcttagaatcaacggcggaatgcgg
ccttttaaacagctgcgaaagccggtatcgactctctcgatccctggcacgatgaaggcg
tactccggaagggaagcgacggaggaggccggagtcgccctggtgggagtccacagcgag
taccctcgcttcggcgaagagagggctctcggcggtggcacttataagggcgggggggct
gcaaaacacaaacctaatataggatataggttaggtaggagaaaggcattatttgaaaag
cgaaaaagaataagtgattacgcgttagtgatgggaatgtttggtataattattatggtt
atagaaaatgagttatctagtgccggtgtgtatagtaaggcttcaatatattctcaggca
ctcaaaactcttatatcaatgtcaactgtgatcttacttggcctaatcgtcgcgtaccat
gctttagaaatacagttatttatgatagacaactgtgctgacgattggcggatagccatg
acgtggcaaagaatagcacaaatcggtctcgagttaagcatctgtgccgttcaccccata
ccaggacagtataccttcacgtggacaaccaagctggccaataaaggaggcgtcattggg
gttgaagttggcacaatatacaaacaaattgaggtaccttatgacgtcactctgtctctt
ccaatgtttctacggctttatttaatatgcagagtcatgctacttcatagcaagctgttc
acagacgcttcttcgaggagtataggagccctcaatagaattaattttaacacaagattt
gtattgaagactctaatgaccatatgccctggcaccgtgttactcgtattcatggtatcg
ctatggataatagcgagttggacgcttcgacaatgcgaaaggtttcacgacgaagaacat
gctaatctgctcaatgcgatgtggcttatcgcaattacttttctctccgttggttttggt
gacattgtgccaaacacatattgtgggcgaggtatagccgtaagcaccggtattatgggg
gcaggatgcacagcattattagtgaccgttgcatcaagaaagttagagttaactagagcg
gagaaacatgtgcataacttcatgatggaaacgcaacttacaaaaaagctgaaaaatgcc
gcagcaaatgttctgcgggaaacgtggttaatatacaaacatactcggcgtgtgaaaagg
gtggacccaggtcgagtaaggactcatcaaagaaaatttttattagctatttacgcgtta
aggaaagtgaagatggaccagagaaaactgatggacaacgcaaatacaataacagacatg
gctaaggacccctttctgttacagacccagaataccgtctacgagattgtatcagacatg
agctcaagacaagatagtatagaagagaggttgactagtttagaagaaaaattatctaca
ctgcaggagcaagtaaacagcctaccagatatgatggctcgatgtatacaacagtgctgg
gagcgagctgagcaaaggcggaactttctccatccagatgcagcagctgtgccaacgccc
cctgcagttaatatttccccatatgccagaactatgccacctacacatggttggccagcg
agtccgtcaacggtgcgagcgcactccgcccctgagagcgcgggccccgcaccccgcccg
cccctgcccagctga
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