Pieris rapae (cabbage white): 111000603
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Entry
111000603 CDS
T05162
Name
(RefSeq) nuclear pore glycoprotein p62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111000603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111000603
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111000603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Baculo_PEP_C
DUF6586
DUF1664
Motif
Other DBs
NCBI-GeneID:
111000603
NCBI-ProteinID:
XP_022125799
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Position
18:7138235..7148804
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AA seq
818 aa
AA seq
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MSFSFGASTTTSGSTFGTTSPAQGSLFGGGDASKALQGTGDKPSLFGGAGTSTPPFGSFA
FGAKTTTAAPSLFSTPTTSTTTAFGGGKPLNFSFSSPPNQTVGSPGFGSPANQNAAQNLS
FGGNTQNPPAFGSQAPTTQASSGFGTPASTGFGFGKSTGFNFTTPASGFSAAQVTTASQP
TQGASAFGGKGFGFGTTATSATTSSSAPGVAPAPAFGTPQPSTQSLSFGATTQAQNQSFA
FATTQAKPGPPSLFPTSQTSTFEIKPGFGGQTQAIGGFTNQTPFASSGMTLGTSASSSVS
TMPIAQSGTAIGSGFNFGGNTLGTTTSTGLAGLGSNIGLSKPQTTGLNVGTSLATSSSGM
NLGTNVSTGLTLGGGPNLGTITTGMNLGTSAAGGLNSSPSLGLNMGTSVAPGLNLGTSAS
TGLNFGTSAPSGLNLGTNASSGLNLGTSAPSGFNLGTSASSGLNLGTSASSGLNMGTSAP
SGLNLGTSVSSGLKLGTNTSSALNLGTSTSSGLNLGTSTATGLALGTSTSTGLNLGTSTA
TGINLGTTTSTGLNLGTSSAGLGTSTGLGFPSSSALTLGKPTSATAASSIASSTPSGIMA
LGKSTASASLTTATATVASAPPAAISSITFAQLEESINKWTLELEEQEKTFIHQATQVNA
WDRLLIANGEKIVELNDAVETVKNEQQSLEHELDFVLGQQKELEDLLAPLEKQLKEDGDR
MRDPEREHMYTLAENLDSQLRQMSEDLKEVIEHLNETNRSQDSNDPIVQIGRILNAHMSS
MQWIDGSITQISTKLDHLKVTHDTLRRENEKSFQLTYS
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcatttggagcatctacgactacttctggtagcactttcggtacaacttct
cccgctcaaggatccttatttggtggtggagatgcatcaaaagcattgcaaggaactgga
gataaaccaagcttgtttggtggagcaggtacaagtacaccaccatttggaagttttgct
tttggggctaaaacaacaactgcggcccctagtttgttttcaacgccaacaacaagtact
acaacagcctttggtggtggaaagcctttgaatttctctttttcatctcctccaaatcaa
actgtaggcagtcctgggtttggatctcccgcaaatcagaatgccgctcaaaatctttca
tttggtggcaacactcaaaatccaccagcgtttggatctcaagccccgactactcaagca
tcatccggctttggtactccagcaagcacaggttttggctttggaaaatcaacgggtttt
aactttacaacaccagcatctggtttttcagcagctcaagtaactaccgcaagtcagcct
actcaaggcgcaagtgcgtttggtggaaagggattcggttttggtacaactgctacctct
gccactactagctcttctgctccaggtgttgctccagcaccagccttcggcacacctcag
ccaagtacccaaagtttgtcattcggtgccaccacccaagctcaaaaccaaagctttgct
tttgcaactactcaagctaaaccaggcccacccagtttgttcccaacctcacaaacatcg
acatttgagataaaaccgggtttcggaggtcagacacaagcaattggtggtttcacgaat
caaacaccttttgcaagttctggaatgacattgggaactagtgcatcaagttcagtttct
acaatgccaattgctcaatctggcacagccattgggtctgggttcaattttggtggtaac
acattaggcactacaacttcaacaggattggcaggattgggctcaaatattggcctctcc
aaaccgcaaacaactggactcaatgtgggaacttcattggctacgtcatcttcggggatg
aatttgggtaccaatgtgtctacaggacttacgttgggaggtggacccaatctgggtaca
ataaccactggaatgaatttgggaactagtgccgccggtggacttaattctagtccgtct
ttaggactcaatatgggtacaagcgtagccccaggtctcaatttgggtacaagcgcatct
acgggacttaattttggcacaagtgcaccttcaggactcaatttgggcacaaatgcatct
tcaggactcaatttgggaactagtgcaccttcaggattcaatttgggcacaagtgcatct
tcaggactcaatttgggcacaagtgcatcttcaggactgaatatgggaactagtgcacct
tcaggactcaatttgggcacaagtgtatcttcaggtctcaaattggggacgaacacgtct
tcggcacttaatttggggactagcacttcgtcggggttgaacttaggcaccagtaccgcg
acaggacttgctttgggtaccagtacatcgacgggacttaatttaggtacgagtaccgct
acagggattaatcttggtactactacgtctacgggactcaatcttggtacaagtagcgcg
ggacttggtaccagtactggtttaggatttccatcatccagtgctcttaccctgggaaaa
cccacttcagcgacggcagcatcttcgatagcttcttctacgccatctgggataatggcc
ctcggtaaatccaccgccagtgcttcacttactacggcaactgcaactgtagcgtctgca
ccacccgctgccatctcgtcgataacattcgcccagctcgaggagagcatcaacaaatgg
accctggaattggaagaacaggagaagacgttcatccaccaagccacgcaggtcaacgct
tgggatcggctgctaatcgccaacggagagaagattgtagaactaaatgatgccgtggaa
actgtgaagaacgaacaacagagtctagaacacgagttagactttgtactagggcagcag
aaggagttggaagacctcttggcaccacttgagaagcagctgaaggaagatggagaccgg
atgagggatccagagagagagcatatgtacacattagctgagaatttggacagccagctc
cgacaaatgtctgaagatctgaaggaagtcatcgaacacctcaacgagaccaacagaagt
caggacagcaatgatccgattgttcaaattggccgaatcctgaacgcacatatgtcttcg
atgcaatggattgatggctccataacgcagatttccacaaaattggaccatttgaaagtc
acccacgacactctgagacgggaaaatgagaaatctttccagttaacatacagctaa
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