Pieris rapae (cabbage white): 111000638
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Entry
111000638 CDS
T05162
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111000638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
111000638
Membrane trafficking [BR:
prap04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111000638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
SOR
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
111000638
NCBI-ProteinID:
XP_022125856
LinkDB
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Position
5:443304..455461
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AA seq
806 aa
AA seq
DB search
MTNQSSPVEEQEKLLEEALNVVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPK
SYYELYMAITDELRHLELYLLEEFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKT
NTNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDTTEAQNENEGTARDAIDF
VLMNFAEMNKLWVRMQHQGHSRDKERRERERSELRILVGTNLVRLSQLESVGVDDYRRLV
LPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLANLQPFLKSCEELQPGVNIKNIIIAL
IERLAAFSQRNEGNVNLSVVLEDGKEEEVQLFEVFSDQVAAITQSRTDMPPEDMLSLQLA
LLKLAQRCHPDKLSYVDRVLAHTDRICTDIQQASGKNHIEHNTPVFKELMKILKLPADHY
KNILTLIKLQNYAPLINRLNQAGRLMIAMHLITDVIESDTTVSAPEDVDSVLSMVDVLVK
DQTAQVEENSTEDFVEEQGLMARLIHHFKSDSADQQYQILSAARKALQGGGVKRIQHTFP
PIVFHAYRLAFIYKDLKDQDEMWEKKCQKIFQFCYQTIGMLVKAELAELPLRLYLQGALA
ISEIGFANHETIAYEYLSQAFTLYEDEISDSKAQLAAITLIIATFEQINCFGAENAEPMR
NQCALAASKLLKKPDQSRAVALCAHLFWKGAKDGKPWALNAETRALECLKKAAKVAQQCM
DGGVQAQLLAELLGRYVLLRERGCEALTTNLIQAIIQKIREELANLDQSEEVEQVTKHFH
NTLQHLQSRMECPDPDSLGYEGLQLA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccagtcttcaccagttgaagagcaagaaaagcttctggaagaagctttgaat
gtagttaaagtgcaagcgtttcaaatgaagagatgcttggataaatcaaagttaatggat
gctttaaagcatgcctctacaatgttgggagagttacgtacatcccttctgtctcctaag
agctactatgagctatatatggccataactgatgagcttaggcaccttgaactgtacctt
ctagaagagttccaaaaggggcgtaaagttgctgacttgtatgaattggttcaatatgct
ggtaacattgttcctcgtctgtatttgttaatcactgttggcttggtgtatattaaaacc
aatacaaacttaagaagagatcttttaaaggatcttgttgagatgtgtcgtggtgtacag
catccactgcggggattgttcttgcgcaactatttattacagtgcacaagaaacattcta
cctgatacaaccgaagcgcaaaatgaaaatgagggaaccgcacgtgatgctattgacttc
gtgctgatgaattttgctgaaatgaacaagttgtgggtacgaatgcagcatcagggtcac
tcaagagataaagaaagacgcgagcgtgaaagatcagagctccgtatattggttgggacg
aatttggttcgtttgtcgcaattggagtctgtgggagtggatgactacagacgtctcgtg
ttgcctgggattttggaacaagtcgtcagttgcagagatgcgatagctcaggaatatctt
atggagtgtattatacaggttttccctgacgagttccacctggccaatctgcagccattt
ttaaaatcgtgtgaagaactacaacctggagtcaatattaagaacattattattgcttta
attgagcgactggctgcgtttagtcagagaaatgaaggcaatgtcaacttaagcgtggtt
ctagaagatggaaaagaagaagaggtgcaattgtttgaagttttctcggatcaagtcgct
gctattactcagagtcgcacagacatgccacccgaagacatgctgtctctccaactggct
ttactgaagttggcgcagcgctgtcacccagacaaacttagttacgtggaccgtgttttg
gctcacaccgacaggatctgcactgatattcagcaggcgagcggcaaaaaccacatagaa
cacaacacgccagtgttcaaagagctgatgaagattctgaagctcccggcagaccattac
aagaacatcttaacactgatcaaactccagaactacgcgcctctcatcaatcgcctgaat
caagctgggaggctgatgattgctatgcatttaatcacggatgttatagagagcgatact
acggtgtctgcaccggaagatgttgattcagtactctcaatggtcgatgtgttggtgaag
gatcaaactgctcaagtagaagagaatagtactgaagactttgtggaagaacaggggctc
atggccagacttatacatcacttcaaatcggattcggccgatcagcagtatcaaatactg
agtgcagcgaggaaagcgcttcaaggcggcggcgtcaagcgcattcagcatactttccca
cctattgtgttccacgcgtacagactggccttcatctacaaggatcttaaggatcaggat
gaaatgtgggagaagaaatgccagaagatcttccaattctgctatcagaccatcggaatg
ctggttaaagctgagttggctgaactgcctctaagattatacctgcaaggggcactggca
ataagcgaaattggtttcgcaaaccatgagacgatcgcatatgaatatctctcgcaggct
tttaccttatacgaagacgagatttcggatagcaaagcgcagttggccgctataacgctc
attatcgccacttttgaacagatcaattgctttggtgcagaaaacgctgaaccaatgcgg
aaccagtgtgcattggcagctagtaagttactcaagaagccagatcagagtcgcgctgtt
gcgttatgtgctcatctcttctggaagggggctaaggacgggaaaccgtgggccctcaac
gcagaaacgagagctctagaatgtctcaaaaaggcagcgaaggtcgcccaacaatgtatg
gacggaggcgtacaggcacaactgttggcagaactattgggaagatacgttctgctcaga
gagagaggatgtgaggcgcttaccaccaacctcatacaagctataattcaaaagatccgt
gaagagttagcaaatctggaccagagtgaagaagtggaacaagtaacaaagcacttccat
aatacccttcagcatctccaaagtcgtatggaatgcccagacccagattcacttggttat
gagggattgcaactagcctaa
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