Pieris rapae (cabbage white): 111000712
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Entry
111000712 CDS
T05162
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111000712
09123 Folding, sorting and degradation
03018 RNA degradation
111000712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111000712
03041 Spliceosome [BR:
prap03041
]
111000712
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111000712
mRNA degradation factors
5'-3' decay
Lsm complex
111000712
Spliceosome [BR:
prap03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111000712
Complex C
U2 snRNP components
111000712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111000712
NCBI-ProteinID:
XP_022125952
LinkDB
All DBs
Position
15:complement(2958829..2959286)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLSDISVIDPDKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttactcttttttcaagtctcttgtaggaaaagatgtagttgtagaattgaag
aatgatctaagtatctgcgggacattgcattctgtagaccagtatcttaacataaaattg
tcggatattagtgtgattgatcccgataagtatcctcatatgttatcagtcaagaattgc
tttatccgaggatctgtagttcgatatgtgcagctcccagcagatgaggtagatacccaa
cttttacaagacgcggccaggaaagaagcaacagtgtcaacaagatga
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