Pieris rapae (cabbage white): 111000774
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Entry
111000774 CDS
T05162
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111000774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111000774
03036 Chromosome and associated proteins [BR:
prap03036
]
111000774
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111000774
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111000774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Nup84_Nup100
TPR_Sec16
Motif
Other DBs
NCBI-GeneID:
111000774
NCBI-ProteinID:
XP_045489032
LinkDB
All DBs
Position
22:complement(737379..795114)
Genome browser
AA seq
1855 aa
AA seq
DB search
MFQKQTFGNTTSGFGSFNAGANTSSPFGGFKPATGTSAFGAAPAFGASPANTSTAGGGLF
GQTNTSGGLFGGAPAANPTPAFGSTGFGSFGASTTTGGLFGANTSSTGLFGNTQNNTAFG
AKPAGFGFGSTPTAGPSTGGLFSSGASTSGGLFSQPTNTLGGGAASGGLFSTNTGAFGQQ
QQAAGTAHVKYHPVVGTDVVVKGGASQTVNIRHHCITCMKEYDSKSLEELRLEDYTAGRK
GSSSGVFGFQQPADNTVKPIFNSSFGQPATTTAPSLFGGGSLGTTSAFGQTNTFSFGNTG
QNTTTTGLFGANKSAFGATPTTGTGLFGATTTQAPAFGTTTSTFGFGPTTQNQQSGGLFG
AKSTTGAFGSTATSGFGSFGSGGLFGAKTQQTTAPTFGTGTPAFGATSSGFGTNTSSSLF
GGGSTFGKPATTQSTFGFNSQPTLGTGLGTGLGSSFQAKPNAFGTTLGGGSSLFPQQNNT
FQTGLNTGLGGSLFNNNSSLGGTGLGLGQNNANTSLMPGGGLGSSVGSNVHEQILTLAAR
PYGDSPLFKDLLPDTSTTAEDALKPTNPAAVKAVLDSSNAAYRVTSPTGGRLKVVPRTVT
QDKKSLFDGLEESDASLEDRLTLKPSRKRLVLRPNTNLDNSLNNRSLGEPQVNGTSQVDG
SVAAERERDDFPSKSKERLREQNSDIELRTDKQNGWPSRHSWNEEKPIDSETPRLYPNLD
KEMPALESERRASWLTTKPLRKPQASNAESPENSVRELGVKESSTSTDKENIDTFYIDEN
VSTHDAPVEAPPHPAGVKLTRPGYYTIPSLEEMIKYIGPDGKCVVPHLTIGRKNYGNVYY
DCEIDVTDMDLDAIVHFLNKEVIVYPEDSEKPPLGEGLNRRAIVTLDRVWPRDKTEKRPV
TEPERLLKMDYEGKLRRVCDKYDTKFIEYRAQTGSWVFRVEHFSKYGISDSDEEEELAPQ
VLKRQLVNQSLQKAAATVTKPVVPVTSALGGVGTNIGLGSNLTLGSNLGLGGLGFSSSVG
DEDMFLQTSLNLMNGSKGFEMDTTEDNADATSLYQDNRVFGMKSPTSELARLEHRQSHNV
QLMKASLYADAEMEDDVSISTGDQMVPHATASVISLPPTSVSHMEMAEEAPEVIEEPVAR
PLIVNPHTVILKYHRKVPPFKKTIAGRLNADCLADMSVCRARHSRVSFGPSNALVFSTTH
DVISELPRKSDLCELGRYVLGRSDEDWSEAVMARVQIGQADSKAVLDTLRRQLQSLLDFS
DPEDATRPFARLVVQESPIGRKQLLEKLLEDACKEEYSARFGVSSSYSVQVWKLCEALWG
EDLLNDGVPGTDEQSIVSRHEDLLKWLKNAVAEITDDELSQPVDVDPEDEKDGHSARVWT
LLLGGRILEACKLCRENRDFNMAILISQAYGDPYFKTLLSRQLNIWKECGADSLISSHKR
AILSLLAGRSPTAELEALDWLRVLNVCARYLCPQIPTLEQIVRTYEELCSRESNVDLTTV
PEESVNMRLPTPDYQQEYMVSIDSNGTSRRILDLRYELIRARAFNTRPCFQPAAYTPHPI
DYSLSFLLGCWFGKPTIRSIVGLAEQLEGYGEWHLAVQVLFYHPDDKIRAHLIEELIGRH
APAEADSSVKARLEFVEKLGVPQKCLLLARAHRAKYEHRPQLEAECLVGAGAWNAAHSVL
VEQLLPEVVLSDNVKSVQPIIEKLSEAARRNEVSGWESGGEALYHYIYVCDEIRGLVSAA
EGQEAEDRSSVACRLEALTPRLAAACRALTLFRSKSPRALAARAEMGARLVQLALAGGQV
SAHLAALLQDLDLPPDCAAHAQYKITSDLSDQASEFCLESTQSSPLSSHRKGERS
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaagcagacgtttggtaacaccacttccggcttcgggtcgttcaacgccgga
gctaatacgtcatcaccgtttggtgggttcaagccggcaacaggcaccagcgccttcggg
gctgctcccgcttttggcgcatctcccgccaatacttctactgccggaggcggcctcttc
ggtcaaaccaatacctccggaggcctatttggaggcgcccctgctgccaaccccactccg
gcgttcggctcgaccggttttggatcctttggtgcaagtacaaccactggtggtctgttt
ggagccaacacttcgtctactggtctttttgggaacactcaaaataatacagcgtttggt
gctaaaccagctggctttggctttggtagtactccgacagcgggaccttcaactggtggc
ctgtttagttctggtgcatcaacaagcggtggattgttcagccagcccactaatactctg
ggcggtggtgcagcgtcagggggactgttctctactaacactggtgcgtttggacagcag
cagcaagcggctggtacagcccacgtgaagtatcaccccgtggtaggcacagatgtcgtc
gtcaagggaggagcctcgcagacggttaacatacgacaccactgcatcacatgcatgaag
gagtacgacagcaaatccctggaagagttgcgtctggaggactacacggcgggaagaaag
ggcagctcgagcggtgtgtttgggtttcagcagccggccgataatacggttaaaccgatt
tttaattcctcatttggccaaccagctactaccacggcaccttcactctttggaggtgga
agtttggggacgacaagtgcatttggacagacgaatacgttctcgtttggtaatacaggc
caaaatacaaccacgactggcctatttggtgcaaataaatcggctttcggagccacaccc
accactggtacgggtctattcggcgctacaacgacgcaagcgccggccttcggtacgaca
acgtctacctttggttttgggcctaccacacagaatcagcaatctggcggtctgttcgga
gcgaagtcaacgacaggagcctttggcagtacagctacgagcggcttcggctcgtttggc
agcggaggcctatttggggcgaagactcagcagaccacggcacccacttttggcactgga
acgcccgcatttggtgcgacatctagcggtttcggaacaaacacatcgagctcattgttc
ggtgggggaagtacttttgggaagccggctaccacgcaatctacatttggattcaactcg
caacctaccctcggtacaggtctaggtactggcctcggttcgtcgttccaggcgaagccg
aatgcatttggaacaacactaggtggtggctcatcactattcccacagcaaaataatact
ttccaaacaggtctcaacacaggtttgggtggaagtctcttcaataataactcctcgttg
ggaggaaccggcctcggtttgggacagaacaatgccaatactagtttgatgcccggcggt
ggactcggttcgtccgtgggctccaacgtgcacgagcaaatactgacgctagcggcccga
ccctacggcgattcgccgctcttcaaagatttactaccagacacatcaacaacagccgag
gacgccttaaagccgaccaatccagcggctgttaaagcggttttggacagcagtaacgcc
gcttacagagtcacttctcccactggaggcagactgaaagtggttcctaggactgtaaca
caggataagaaatctcttttcgatggcctggaagagagcgacgcgagcctagaagacagg
ttgactctgaagccttctaggaagagattggttctgcggcccaacaccaacttggacaat
agtctgaataacagatctctaggtgaacctcaagtaaacggaactagtcaagtggacggc
tccgttgcagcagagagagaaagagatgatttccccagtaagagtaaggagaggttgcga
gagcagaatagtgatatagagctccgtacagacaaacaaaatggctggccatcgagacat
tcgtggaatgaagagaaaccgatcgatagtgaaacgcctcggttatatccaaatctagat
aaagaaatgcccgctctcgaatctgaacgacgagcgagttggttaacaacaaaaccgctc
cgaaaaccgcaagcctccaacgcggaatcacctgagaactcagtaagagagttaggagtt
aaagagagttccacttccactgataaggagaatatcgacactttctatatagatgaaaat
gtgtccacgcacgatgcgccagtcgaggcaccgcctcaccctgctggtgtcaaactcacc
agacctggctattacacaattccttcgttggaagagatgattaaatacatcggtcctgat
gggaaatgcgttgtaccacatttgacgatcggcagaaagaattatggaaatgtttattat
gactgtgaaattgatgtcaccgacatggatttggatgctatagtacacttcctgaacaag
gaggtgatagtctacccggaggacagcgagaagccgcctttgggcgaaggtttgaaccga
cgtgccattgtcacgcttgaccgtgtctggccgagggacaagactgagaagcgtcccgtc
actgaaccagagaggttgttaaaaatggactacgaaggcaagttgcggcgtgtatgcgat
aaatatgacaccaagttcattgagtatcgcgcacaaactggtagttgggtgtttagggtg
gaacacttcagcaagtatggcatatcagattcggacgaggaagaggaacttgcgccccag
gtgttgaaacgacaactcgtcaatcagagtttgcagaaagcggctgctactgtcacaaaa
ccggtagtgcccgtaacatcagctcttggaggcgtgggaacaaatataggcctggggtca
aaccttacccttgggtcaaatttgggtctaggcggtttgggattcagttcctctgtgggc
gatgaagatatgttcctgcagacctcgctcaatttgatgaacggctccaaaggttttgaa
atggatacgacggaagacaacgcagatgcgacaagtctataccaggacaacagagtattc
gggatgaagagtcctacatcagagttggcccgtttggagcataggcagagccataatgtt
caactgatgaaagcttctttatatgctgatgctgaaatggaagacgacgtgtcaatatca
acgggcgatcagatggtgcctcatgccactgcctccgttatctctctgccaccgacgtct
gtatcccacatggagatggctgaagaagcgccggaggttattgaagaacccgtcgcacgg
cccctaatcgtgaacccacatacagtgatactgaaatatcataggaaagtaccgcctttc
aagaaaactatcgctggtcgcctgaacgccgattgtttggcggacatgtccgtgtgtcgc
gcccggcacagccgcgtctccttcggccccagcaacgccctggtgttcagcaccacgcat
gacgtcatttccgagttaccgcgcaaatcggacctatgtgagctgggcagatatgtgttg
ggaaggtctgatgaggactggagcgaggctgtcatggccagagttcaaatcggacaggcg
gacagtaaagccgttttggacacactacgtcgtcagctccaaagcctcctcgatttctct
gaccccgaagacgcgacgcgaccgttcgcgcgactagtcgtgcaagagtcgccgattggt
cgcaagcagttgctcgagaagttgctggaggacgcctgtaaggaggagtatagtgcgcgg
tttggcgtgtcaagttcatacagcgtacaagtttggaaactgtgtgaggctctctggggt
gaagatcttctcaatgatggtgtacctggaacggacgagcaatctattgtcagccgtcat
gaggatcttttgaagtggttgaaaaatgcagtcgccgaaatcactgatgatgaactatcg
cagccagtagacgttgaccctgaagatgaaaaagatggtcacagcgcccgagtctggacg
ctattattgggcggtagaatcctggaagcctgcaagctttgccgggaaaatcgtgatttt
aatatggcaatactgatctctcaggcttatggtgacccatacttcaagactctgttatcg
cgtcagctgaacatctggaaggaatgtggcgctgattccctcatctcgagccacaaaagg
gcgatactgtctctgctcgcggggcgaagccctaccgcggaacttgaagctttggactgg
ttgagggtgctcaatgtttgtgctagatatctctgccctcaaataccaacactagagcag
atagtgcgtacgtacgaagaactgtgcagccgggagtcgaacgtggatctcaccactgtg
ccagaggagagtgtcaacatgcgtctgccgacacccgattatcagcaggagtacatggtt
tccattgactcgaatggcacatcgcgtcgaatcctggaccttcgttacgagttgatacgc
gcgcgtgcgttcaacacacggccgtgtttccaacccgctgcgtacacgcctcatcccatt
gactacagtctgagctttctcctgggttgttggttcggcaaaccgacaattagatcgatc
gtgggattggcggaacagctggagggatatggcgaatggcatttagccgtccaggtgctt
ttctaccatccagatgataaaatccgtgctcatcttatcgaagagctaataggccgccac
gcaccagcggaggctgattcctcagtgaaggctcgtcttgagtttgtggagaagttggga
gttccacagaagtgtttgctgcttgctagggctcatagggcgaaatacgagcaccgtccc
caattagaagcagaatgcctggtcggcgcaggggcgtggaacgcggcgcattctgtactc
gttgaacaattgctgcccgaagttgtattatccgataatgtaaaaagcgtccagccgata
attgagaagttgagcgaagccgcgcgtcgcaacgaggtcagcggatgggaaagtggagga
gaggctctgtaccattacatctatgtttgtgacgagatacgagggctggtgtcggccgcg
gaagggcaagaggcggaagataggtcgagtgtcgcgtgtcggttggaggcccttaccccg
cgattggccgccgcttgcagggcgcttaccctattcaggagcaaatcaccacgagcgttg
gccgctcgggcggagatgggggcgaggttggtgcaactggccctggccgggggacaggtg
tccgcgcacctggccgccttgctgcaggacttggacttgccgccagattgcgctgcgcat
gcgcagtataagattacgtcagatctatcagaccaagcttcggaattctgtttggaatca
acacagagctcccccctctcttctcatagaaaaggtgaacgtagctag
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integrated database retrieval system
