Pieris rapae (cabbage white): 111000946
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Entry
111000946 CDS
T05162
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prap01009
]
111000946
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111000946
Protein phosphatases and associated proteins [BR:
prap01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111000946
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111000946
mRNA cycle factors
Stress granule specific factors
111000946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
111000946
NCBI-ProteinID:
XP_045488466
LinkDB
All DBs
Position
20:complement(2820836..2837078)
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AA seq
798 aa
AA seq
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MMHHPNMHHQPMSGHPPQHLPTHQGMPAHHQMPPHQIHRENRHVTLTRVTLGPSAAGGSM
GGHGQMSGMGTMTVAPHHAAGQRPPHAIRAMHHPPAQHHNMPPPQSRTLRRPYISGGYGG
VPGYAPPSHAHAEHTAHTTHQTPGLCRPPSPIRAMQPKLSSDFVTAMTATASVSVTTDQS
KEESVSVSASGADAKSDEEQAAGESEAPRPSPAQANSKEKTPMCLVNELARYNKIKHQYR
LTSETGPAHKKIFTVTLRLGDTEEYTAEGSSIKRAQHAAASAALSGTRFPPPPPRAAPTH
ASHSHHHRHAGAVMPTVELNALAMKLCKPAVYTSVPPVPAPRPRARLPPPYRLPFLPPYP
HPPRLMEPGPQLLYRIRVCVGDRAWLGEGSTPQAARHDAAARALVDLRPQHHETQLQHPD
TPGESEADLLNSDVKSPVSLVHELALKRNLNVTFSVKSERGPPHMRVFITICKVGEMETE
GEGNGKKVSKRRAAERMLEEMRRRWPAAALRTRPTVDKRRHPPAKKKPRNLIKEGATGDT
SETGGGGGAPDNPISRLAVARHAVRARSPQYRVLEERGAARRREFLVQCDAPPHSATGLG
PNKKTAKRRAAHNVLLAMEMANGGEPGSLTSTTDPTANGEVKPATDVKRKDETSGDMRQP
VPGVLMVDYHARSGQPVQTNGVKASENSALGGSGGNTPGAKDQLMYLAQLLGFTVQFSDF
PKRNHGEFLSLVSLSTEPPVMCHGGGASTAHSHEQCALAALRALAGMGLDAPAQTPTAQL
QNSGISNAKSNAINGMAE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgatgcatcatccgaatatgcaccatcaaccgatgtcgggacatccgccccagcatctt
ccgacccaccaaggcatgcctgcacatcatcagatgccgccgcatcaaatacacagagag
aacaggcacgtaacattaactagagtgacactgggtccgtcagcggcgggaggtagcatg
ggtgggcatggtcagatgagcggcatggggaccatgaccgtggcaccgcaccatgctgcc
ggtcaaagaccgcctcacgccattcgcgccatgcatcatccgcccgcacaacatcataat
atgccaccgccccaaagtcgtacgctccgtaggccctacatcagcggcggatacggcggc
gtgcccggatacgcgccgccgtcgcacgcgcacgcagaacacaccgctcacaccacacat
caaactcctggtctgtgcaggccaccgtctcctattcgggcgatgcagccaaagctaagt
tcagattttgttacggcaatgacagcgacggcaagcgtgtcggtgaccaccgatcagtcg
aaggaggagagcgtgagcgtaagcgcaagcggagcggatgcgaaaagcgacgaggagcag
gcggcgggcgagagcgaggcgccccgcccgtcgcctgcgcaggccaacagtaaagagaag
acgcccatgtgcctggtcaacgagttggccaggtacaataagattaagcatcaatatcgc
ctcacatcagagacaggacccgctcacaaaaaaatattcacagtaacacttcgcttgggt
gatactgaagaatacaccgctgaggggtcctctataaagcgagcgcagcacgcggcagca
agtgcggccttaagtggcactcgcttcccgccaccacctccaagggccgcacccactcac
gcttcgcattcgcatcatcacaggcatgctggcgcagtaatgccaacggtagagctaaac
gcgctggctatgaagctgtgcaagcctgctgtgtacacatcggttccaccagtacccgcc
ccacggcccagagctcgcctgcctccaccctatcgcctgcccttcttgccgccttatcct
cacccgccaaggctgatggagcccggaccgcagctgctctatagaattcgtgtgtgcgtg
ggcgatcgtgcgtggttgggcgagggcagtacgcctcaagcagccagacatgatgcggct
gcacgggccttggtcgatcttaggcctcaacatcacgaaacacaactacaacatccggat
acacctggagaaagcgaagcagaccttctcaactcggatgtgaagtccccagtctctttg
gttcatgagttggctctcaagaggaatctcaacgtcacattttccgtaaaatcggaacgc
ggaccgccgcatatgagggtcttcataactatttgcaaagtgggcgaaatggagacggag
ggtgagggcaatggaaagaaagtgtcgaagcgtcgcgcagctgagaggatgctagaggag
atgcgccggcgttggcccgcggctgccttacgcacaaggcccaccgtagacaagcgacgg
catcccccggccaagaagaagccacggaatttgattaaggaaggggccacgggtgataca
tcagagacaggcggtggtggtggggccccagacaatccgatctctagattggcggtcgca
aggcacgctgttagggcccgatcgccccagtaccgcgtcttggaggaacgcggggccgcc
agaagacgcgagttcctggtacagtgtgatgccccaccgcatagtgccacgggtctgggg
cccaataagaagactgcgaagcgacgggccgcacataatgtacttttggcgatggaaatg
gcgaatggcggtgaaccgggttcattgacctctacaactgaccctacagccaacggggaa
gtgaaacctgctactgatgtaaaacggaaggatgaaactagtggtgatatgcggcaaccg
gtaccaggagttttgatggtggactaccacgccagatctggtcaaccagtgcagaccaat
ggagtaaaagcgagcgagaacagcgctttaggtggaagtggtggaaacacgcctggcgct
aaagatcagctgatgtacctggcacagctcttgggcttcactgtacaattctctgacttc
ccaaagcgcaatcacggcgagttcctatctctggtgtctctgtcaacggagccgcccgtg
atgtgccacgggggaggggcctccactgcgcattcgcacgagcagtgcgctctggccgcc
ctccgcgccctcgccggcatggggttggatgcgcctgcgcagactcccactgcacaattg
cagaatagcggtatatcaaacgccaaaagcaacgcgatcaacggcatggccgagtga
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