Pieris rapae (cabbage white): 111001174
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Entry
111001174 CDS
T05162
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111001174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prap04121
]
111001174
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111001174
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
HECT type E3
111001174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
RF3_C
Motif
Other DBs
NCBI-GeneID:
111001174
NCBI-ProteinID:
XP_045486327
LinkDB
All DBs
Position
12:3842224..3872996
Genome browser
AA seq
2278 aa
AA seq
DB search
MAEQHITPSHSALTRESSRSSPSRVVGGRCLRNVRKASTSRRNKRTLTSPHPHTSREADP
ESPSSNIELRRSSRLVNSLPRSDYSLSERWSYGTDVYETRYDTSDSKQGDTPHTAGEHSK
RRRTSLNDKKKPKRHLSSKISECIAYCTRSRTALRSESVCELPKNTNAQPAQRPTHIATT
SSALQAASNPSEGGLLPLDERDYVYSPFSSSTVTDLLDSDYSVYSPTANRRKGKKRKRPS
HRSLSTRKSSYCLFEIEEPKKYKTEVRAKDPADTKITFSERASLDQDTGKDPLSSPTCTY
SLRKRHNRDLGPPTSTVVNDSSVSTTTNEAPFLSDRKSATERGRTVSPPPFKDLQEASSS
KPHSSDSKLLIVPRDLPYLRQTNARRSIAAATGATLGACLTRGASTSQRQRQESSSKRQS
SGGGTEEPGSSGRRARTRDMPQPQPQNTARKDKRGKSSLGSCASTGAASSRSHSQSVTTG
AIASTSSTPPVSASAVSMPDNASNDAKPKGKASSPAEDCSGGGSGVGGAEESSSEEGEVG
RLQALLEARGLPPHLLGALGPRMQHLLHRTVTANSAAASKAAQLLSGLQATGDEGQQLQA
VIEMCQLLVMGNEDTLAGFPVRQVVPALVNLLAAEHNFDMMNHACRALTYMLEALPRSSG
AVALAVPAFLDKLQAITCMDVAEQSLTALDMLSRRHSKAILQARGVSACLTYLDFFSINA
QRAALSITANCCQNLTPDEFHLVRESLQLLANRLTIQDKKSVECVCLAFSRLVDSFQHDP
ARLQEIATPELLTNLQQLLVVQPPLIAGNTFITVLRLLWVMCAACPQLALALHQRSIADT
LLCLLTGSTVHHEQVELLPRLPQELYEITCLIGELMPRLPTDGIFAVDAHLDRPWSANTE
RGAQWQWRDDRGVWRCYSWAECRALEAGVSGGEEEVCLATLGRSYTVDLTAMQQLNDHTG
TARPVQRLPPAAPPPATADGNPVPDPRIAMVRTSPSLVRALLAVLHEVYWSSAGPAVRSQ
ALKAILRCVYYADAQLLRQVLKTQVISSHIAGMMASSDLRIVVGSLQLAEILMQRLSEEM
GAQFRREGVLHQVAQLAQKAPAPQPARQAKLKSPSGASVRGTGNASPPASTSSSPLEHNN
ISLAFSASGSFIASTLLAATEAGITEAGPATSASTHQTTTSVHRSGSPMQLADMLKRKRP
VKRSGGAGARRPRTREEVTLGHHALGQAQPPATPTTAPHSSNTASAGRSANRVGGTSKTS
SFLSSLNPSRWGRSPHAHTHKDAGLLASPHASANLSLQNKEKVREWIECVASRLQREWGA
LGGGGGALQQLAALAVALPRRADLALEPLLVLRDTLARHDLSPFEVNHSGVIGALLQFLT
GSESDSEEQEGEGEGRDSAEQIAACEDRLRLFLHVFADMPLAPDENEWMEKASSIGGFAS
IGAGALSALVSKVNACVSHLEQFPVRVHDLPARPATSALKFFNTHQLMIQPLQCDLKRHP
TCTTLKQWKGGVVRIDPLALVQAIERYLAQRGYAQARSREGTGPHTDDEAASDDDVEDTL
ATTHHVAESDHKLEFLIGDTVLPYNMTVYQAVRQFGEQNDADTDTETPLANAGIWVQTHT
IYYRAVEGGEQPRADSSTSRKGKGQTTKMSSRRKPDLLWTEGIVPAQLSSLAVMLRSGAI
SKWGTDMNDASLPALALLRALHALSRHWHTLYRAACLPDHRSLVPNSDFINTKLAAKANR
QLQDPLVIMTGNLPPWLKKIAYACPFILPFECRHLLFYVVSFDRDRALQRLLEAGGERGA
PAGGSSEAERVAPRLDRRKRTVQRDNVLRQAEHVMHEFGHSKALLEIQYENEVGTGLGPT
LEFYALVSQELQRADLDLWHGSENFKQKPTSFGGEIVKSQPTVVSDRSSDAATRLASSVR
DALNLDDDRSPEPSDLEKETSIPSPAPDATYVSWPCGLFPQAIGRNARASHLSRVKAKFR
FLGKFMAKAVMDSRMVDIPLSVSMYRWAVSEQQWLNLSDVRHVAPELWRSLCRLRRVADR
AQAIATDDNYSPEQRNQMINALELDGCPIEELGLDFILPGDGCTELRRGGRDIPVTAHNL
HHYIALVTHWLLYEGVTKQMDAFKEGFESVFPLANLKIFYPEELEQVFCGSPSGGREQRW
EPRMLAECIRPDHGFNAESRAIRMLIDILASYNREEQRLFLQFVTGSPRLPTGGFKSLNP
PLTVVRKSLESSLDPDEYLPSVMTCVNYLKLPDYSSAEVMRAKLRLAASEGQHSFHLS
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaacacatcacaccgtcgcactctgcactcacgagagagtccagcaggtct
tctcctagcagggtggtgggcggtcggtgcttacgtaacgtgcgtaaggcaagcaccagt
cgtcgcaacaaacgcaccttgacgtcgccccatccgcataccagccgcgaagctgatccg
gagtccccaagctctaacattgaattacgaagaagttcacgtctggtcaactcgctgccc
agatctgattactcactctctgaaaggtggtcctacggaacggacgtgtacgaaacccga
tacgacacatcagattcgaaacagggtgatacaccacacacagccggtgaacactcaaaa
cgtcgccgtacttcattgaatgacaagaaaaaacccaaaaggcatttatcgtcaaaaata
agtgagtgcatagcgtattgcacacgttcacgcactgctcttaggtctgagagtgtttgt
gagctacccaaaaatacaaacgcacaacccgcgcaacgtcccacacatattgctactaca
tcttcagctcttcaagccgcatccaacccaagtgaaggaggactattgccattggacgaa
agagactacgtgtactcccccttcagctcctcgactgttactgacctacttgattctgat
tattccgtctacagtccaacagccaatcgaaggaagggaaagaaaaggaaacgaccatca
catcgttccctatcaaccagaaagagtagttattgcttatttgaaatagaagagcccaaa
aagtataaaacagaagtgcgggcaaaagatccggccgatacaaagattactttcagtgag
agggcatctctagatcaagatacaggaaaggacccgctcagtagtccaacgtgtacatat
tcattacgaaaacgtcacaatcgagacctcggcccgcccacttccactgttgtcaacgac
agttcagtgagtacgacaacaaacgaagcaccgtttctttcggatcgtaaaagcgcaacc
gaacgcggcaggactgtatctccgccgccatttaaagatctacaagaagccagttcatca
aaaccgcatagttctgatagcaaactacttattgtaccccgagatctcccatacttacga
caaactaacgccagaagaagtatcgctgctgcaacgggtgcgactctgggtgcttgcctg
acgagaggagctagcacctctcaacggcagaggcaggaatcttcatccaagagacagtcg
agcgggggcgggaccgaagagccgggaagtagcgggcggcgtgcgcgcacgcgcgacatg
ccgcagccgcagccacagaataccgcgcgtaaggacaaacgaggtaaaagcagtctgggt
tcgtgcgcaagcactggtgctgcatccagccggtctcactcgcaatctgtaaccacgggt
gcaatagcgtccacatcgtctacgccgccggtgtctgcctcagcggtatcaatgcctgat
aacgcttccaacgatgcaaagcctaagggcaaagcatcgtcaccggcggaggactgcagc
ggcggcggcagtggcgttggtggtgccgaagaatcgtcgtctgaggaaggagaagtcgga
cgtctacaagcgctcctcgaagcccgcggtcttccgccacacttgctgggagcccttgga
cctcggatgcagcacctcttgcataggactgtgactgcaaattctgcagcggcatcgaag
gcggcacagctgctctccggtctccaagcgaccggtgatgaagggcagcaattgcaggcg
gtgatcgagatgtgtcaactgttggttatgggcaatgaggataccctcgccggattccca
gtacgacaagtggtccctgcacttgtgaatctattggctgccgagcataactttgatatg
atgaaccacgcctgccgtgccctcacatatatgctggaggctctgccgcgtagctctggg
gccgtagccttagcagtgcctgccttcctagacaaactgcaagccatcacctgcatggat
gttgctgagcaatccctcacagctctggatatgctgtccaggagacactctaaggcgatt
ttgcaagcgcgcggtgtgtcagcgtgtctcacatacctggatttcttctctatcaacgct
cagcgggccgcgctgtcaatcactgccaactgttgtcaaaatctgacacctgacgagttt
catcttgttagagaatctcttcaattattagccaaccgattaacaatccaagataagaaa
tcagtggaatgtgtttgcctggccttctcccgtttagtggacagcttccaacatgatcca
gctcgtttgcaggagatagccacgcccgaattgctcaccaatttgcaacagcttctggta
gtgcagccaccgttgatagctggcaacacctttatcacggtccttcgtttgttgtgggtg
atgtgcgccgcttgcccacaattagctctggccctacaccaacgctctatagctgacacg
ttgctttgtctgctgactggatccactgttcatcatgagcaagtagagctattaccacgg
cttccacaagagctgtatgagataacctgcctcattggggagctgatgccgcgtttgccc
actgatggcatattcgccgttgatgcacacttggatagaccctggtctgctaacacggaa
cgcggggcacagtggcaatggagagatgatagaggtgtatggcggtgttattcttgggca
gaatgtcgagcgttggaggcgggtgtcagcggtggtgaggaagaggtctgcctggcaacc
ctcggacgctcctacacggtggacctgacggccatgcagcagctcaacgaccacactggc
accgcgaggcctgtgcagcgtctgcctcctgctgccccgccgcctgccactgctgatgga
aacccagttccagatccacgtatagccatggtgcgtacgagcccgtctctcgtacgtgca
ctattagccgttctgcacgaagtgtattggagctcagccgggcccgccgtgcgctctcag
gcccttaaagccatattgcgctgcgtgtattatgctgatgctcagttgcttcgacaagtg
ctcaagactcaggttatatcgtctcacatcgcgggtatgatggcatccagtgaccttcgt
atagtggtggggtcccttcagcttgcagaaatcctgatgcagcgtttgtcagaagaaatg
ggcgctcagttccgtcgtgagggagttctgcatcaagttgctcagttggctcaaaaggcg
cctgcaccccagcccgctagacaggccaaacttaagtctccgagcggggcaagtgttcgg
ggtaccggcaatgcatctccaccggcttctacgtcttcatctcctctggagcacaataat
atatctctagcattttccgcatctggctctttcatcgcaagcaccttactggcagctact
gaagctgggattacagaagcgggacctgcaacgtctgcatctactcatcaaacaaccaca
tctgttcatagatccggcagtcccatgcaactggctgacatgttgaagcgcaagcgcccc
gtaaagcgttcgggtggcgcaggcgcacgcagaccgcggactcgcgaggaagtcactttg
ggacatcacgcactcggacaagctcagccgcccgccacgcccactacggcaccgcattca
tctaacacggcatcggcgggtagatcagccaaccgtgtaggcgggacgtctaaaacatct
tcattcctgtcgtcactgaatccgtcgcgttggggccgatcgccccatgcccacacgcat
aaggacgctggtcttctcgcgtcgccacatgcgtcggctaatttgtcgctacagaacaag
gaaaaagttcgcgagtggatagagtgcgtagcgagccgccttcaacgcgagtggggcgct
ttgggcggtgggggcggagccctgcaacagttggcggcactcgcagttgctttgccacgc
agggctgatttggcgctcgaaccgctgctagtactgcgggacacgcttgcgagacatgac
ctgtcacctttcgaggtgaatcactccggtgtcatcggcgccttactacaattcctaact
gggtcggagtcagactcagaggaacaggaaggcgaaggcgagggtcgagactcggctgaa
caaatcgcagcttgtgaagatcgtttaaggctcttcctgcacgtcttcgctgatatgccg
cttgcacccgatgaaaacgaatggatggaaaaagctagcagtatcggcggttttgcgtca
atcggcgcaggcgcattaagcgctctggtgtcaaaggtgaacgcgtgcgtgtcgcacctg
gaacagttccccgtacgcgtacacgacttgcccgctcgtcctgccacctcagcgcttaag
ttcttcaacacgcatcagctaatgatacaaccgttacagtgtgatctcaaacgtcatcca
acatgtaccacattgaagcagtggaagggaggagtggttcggatagaccccttagcatta
gtacaggccattgaacggtatctagcgcagcgtggctatgctcaagctcgtagtcgtgag
ggcacaggcccccatactgatgatgaagcagcctccgatgacgacgttgaagacacactt
gctactactcaccatgtcgctgagtccgatcataaattggagtttctaataggagatacg
gtactgccatacaacatgactgtatatcaggcggtcagacagtttggcgaacaaaatgac
gccgacactgacaccgagactcctctggctaacgccggtatatgggtacaaacacataca
atatattatcgcgccgtggaaggaggcgaacagccacgtgctgactcttctacgtcgcgt
aaaggaaaaggacaaacaactaaaatgtcgtcacgacggaaaccagacttattgtggact
gaaggcatagtaccggcgcagttaagctcgctagcggtaatgctgcggtcgggtgcgatc
tcaaaatggggcacagacatgaatgacgcatctttgcccgccctggctctgctccgagct
ttgcatgccctctctcggcactggcatacattgtaccgagctgcctgtttgcccgaccat
cgctcgttggtgcccaactcggactttattaatactaagcttgccgcaaaggcaaatcga
caattacaagacccacttgttattatgactggaaacttaccgccttggttgaagaaaatt
gcatatgcctgccccttcatactaccattcgaatgccgtcacctactgttctacgtggtg
tccttcgaccgtgaccgggccttgcagcgtttactagaagcgggaggagaaaggggagct
ccagctggtggctccagtgaagcagagagagtggcgccgaggttggatcggcgcaagcgc
accgtgcaaagggacaatgtgctgaggcaggccgagcatgttatgcatgagtttggacat
tcaaaggctctattagaaatccaatacgaaaacgaagtcggcaccggtctcgggccgaca
ttagaattctacgcgctcgtatcgcaagaattgcagcgggctgatctcgatttgtggcac
ggcagtgagaacttcaaacagaagcccacttcgtttggtggggagatagtcaaaagccag
ccaacagtggtctcggataggtcttcggatgccgccacccgtttagcgtcttcagtgcgt
gacgcattgaatcttgacgacgaccgttcgccggagccgtctgacttggagaaggagaca
tccataccttcccccgcacctgacgccacctatgtttcttggccgtgtggcctgttccca
caagctattggcaggaatgcgagagcctctcatctctcaagagtgaaagctaaattccgc
ttccttggaaagtttatggctaaagcggtaatggattcgagaatggtggacattccctta
tcggtatctatgtaccgatgggccgtaagcgagcaacagtggctcaatcttagcgacgta
cgacacgtcgctcctgaactgtggcggtcgttgtgtcgcctgcgacgcgttgccgatcgc
gcacaggctatcgccacagacgacaactactcaccggaacaaaggaaccaaatgattaac
gcattggagctagatggatgccctattgaagagctgggtctagattttatccttcctgga
gacggatgcacagagctaaggcgcggcgggcgggacatacccgtcacggctcacaaccta
catcattatatcgccctcgtcacacactggctgttgtatgaaggtgtaacaaaacagatg
gacgcatttaaagaaggttttgaatcagtattcccgttggcaaatctcaaaatattctat
cctgaagaattggaacaagtcttctgtggcagtccatcaggcggcagagagcagcgttgg
gagcctcgtatgcttgcggagtgtattcgaccagaccacggcttcaacgcagagtcgcgt
gctatacgtatgctcatcgatattctggcctcttacaatcgggaggaacaacggctgttc
ttgcaattcgtaactggaagccctcgtctacccactggtggcttcaaatctctaaacccg
ccgttgacggtagtccgtaagtcgttggagtcgtcattagacccggacgaatacttgcca
tcagtgatgacgtgcgtcaactacctcaagttgccagactatagcagtgctgaggtgatg
cgtgccaaactgcgactcgccgcctcagaaggacagcattccttccatctctcctaa
DBGET
integrated database retrieval system
