KEGG   Pieris rapae (cabbage white): 111001186
Entry
111001186         CDS       T05162                                 
Name
(RefSeq) probable nucleoporin Nup54
  KO
K14308  nuclear pore complex protein Nup54
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111001186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prap03019]
    111001186
Messenger RNA biogenesis [BR:prap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111001186
SSDB
Motif
Pfam: Nup54 Nup54_C
Other DBs
NCBI-GeneID: 111001186
NCBI-ProteinID: XP_045486296
LinkDB
Position
12:3974041..3986853
AA seq 558 aa
MSFSFGSTASQATPFGSSSKPSFSFGSTNTATTSQAGFSGFGTSTTSSGFGSFGSTSNAT
ATPFGGLGSTPASTAPSLFGGTTFGNTAAKPNTGFGAGTFGANTGFGTGTSSFGSTAPSF
GTNTFGTGSTFGSTFGKPTTSGFSGFGTGLGTTSAFGQQQQQQQQQQQPQGPTNAHEALV
AAVFNCNVFGDERDQVLAKWNLLQAQWGTGQAYYNRNAPPLELNEQNPLCRFKAVGYSRL
GGKEDKDGHVAMMFNKPEQEIKSNQQGFITSLASLLGNKPNLAVNIETVKAVSDKKCQVV
VYIVDKGAGGCHISASELSSFLNNGAARNTLTGAGCTSITPVTRPTPQMLDQYLQAPPPG
MDMRLWKQAQADNPDPENYIPVPIIGFSEIKFRAQCQTSESGLQASYLRKASETLSELRT
RRAASAATLAQLTARLNSLRHTLLQVIARQEVLGRVGAALSPEEEATRARLQELATQLAA
PPLYNGRLNELLCAVRLQRSASAGAPYERYHLDPGAQEDVKQFLSFQQRGMAHLMDTAKT
DLAALNTIAEGMAKLVRA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgtccttctcatttggatctactgcgtctcaagctactccgtttggatcaagttcaaaa
ccatcattttcatttgggagtactaacacagctacaacaagtcaagcaggatttagtgga
tttggaactagtacaacttcatcaggttttggtagctttggctcaacttcaaatgccaca
gcgacaccctttggtggcctaggaagcactccagcatccacggccccatctctgtttggg
ggaactacatttgggaatacagcagctaaaccaaatacaggatttggtgctggaactttt
ggagcaaatactggatttggcactggtacatcatcttttggtagtacagcaccatcattt
ggaaccaacacatttggcacaggatctacctttggatcaacatttggtaaaccaacaaca
tcaggtttttctggctttggtactggacttggaaccacttcagcttttgggcaacagcaa
caacaacagcaacagcaacagcagcctcaaggaccaacaaatgcccatgaagcacttgta
gctgctgtattcaattgcaatgtatttggagatgaacgggaccaagttttggctaaatgg
aatttgttgcaggctcaatggggcactggtcaagcttactataatagaaatgcaccaccg
cttgagttaaatgagcaaaatccattatgccggttcaaggctgtgggttattcaagactt
ggcggtaaagaggacaaagatggacacgtagctatgatgtttaacaaaccagagcaggaa
ataaagagcaatcagcagggatttattacttctttggctagccttcttggcaataagccg
aatttagctgtcaatatcgagactgtcaaagccgtgtcagataaaaaatgtcaggtggtg
gtatacatagtggataaaggtgcgggtgggtgccatattagcgcgtctgaactgagctcg
tttcttaataatggagcggctcggaacacgctgactggtgcgggatgtaccagcataacc
ccggttacaagaccgacgccacagatgctagatcagtacttgcaggctccaccgccggga
atggatatgcgcctttggaaacaagcccaagctgacaaccctgatccagaaaactatatt
cctgtacctataattggattttctgagatcaaattccgtgcacaatgccaaacatcagaa
tctggtctgcaggccagctatcttcgtaaagcgtctgaaacattgagcgagttgcgcacg
cgtcgcgccgcctccgcagcaactcttgcgcaactaacagcgcgacttaactctctgaga
cacactttattacaggtgattgcacgtcaagaagttttaggacgtgtcggcgcagctcta
agtcccgaggaagaagcgactcgtgcgagattacaagaattagccacgcaactggccgcc
ccgcccctctataatggtcgattgaatgagctattatgtgcggtgcgacttcagcgtagc
gccagtgcgggcgcaccttatgagagatatcatttggacccaggtgcgcaagaagacgta
aaacaattcctgtctttccaacaacgtggtatggcccatttgatggatacagctaaaaca
gatcttgcagccctcaacactatcgcagaggggatggccaaacttgtccgggcctag

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