Pieris rapae (cabbage white): 111001186
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Entry
111001186 CDS
T05162
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111001186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111001186
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111001186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
111001186
NCBI-ProteinID:
XP_045486296
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Position
12:3974041..3986853
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AA seq
558 aa
AA seq
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MSFSFGSTASQATPFGSSSKPSFSFGSTNTATTSQAGFSGFGTSTTSSGFGSFGSTSNAT
ATPFGGLGSTPASTAPSLFGGTTFGNTAAKPNTGFGAGTFGANTGFGTGTSSFGSTAPSF
GTNTFGTGSTFGSTFGKPTTSGFSGFGTGLGTTSAFGQQQQQQQQQQQPQGPTNAHEALV
AAVFNCNVFGDERDQVLAKWNLLQAQWGTGQAYYNRNAPPLELNEQNPLCRFKAVGYSRL
GGKEDKDGHVAMMFNKPEQEIKSNQQGFITSLASLLGNKPNLAVNIETVKAVSDKKCQVV
VYIVDKGAGGCHISASELSSFLNNGAARNTLTGAGCTSITPVTRPTPQMLDQYLQAPPPG
MDMRLWKQAQADNPDPENYIPVPIIGFSEIKFRAQCQTSESGLQASYLRKASETLSELRT
RRAASAATLAQLTARLNSLRHTLLQVIARQEVLGRVGAALSPEEEATRARLQELATQLAA
PPLYNGRLNELLCAVRLQRSASAGAPYERYHLDPGAQEDVKQFLSFQQRGMAHLMDTAKT
DLAALNTIAEGMAKLVRA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctcatttggatctactgcgtctcaagctactccgtttggatcaagttcaaaa
ccatcattttcatttgggagtactaacacagctacaacaagtcaagcaggatttagtgga
tttggaactagtacaacttcatcaggttttggtagctttggctcaacttcaaatgccaca
gcgacaccctttggtggcctaggaagcactccagcatccacggccccatctctgtttggg
ggaactacatttgggaatacagcagctaaaccaaatacaggatttggtgctggaactttt
ggagcaaatactggatttggcactggtacatcatcttttggtagtacagcaccatcattt
ggaaccaacacatttggcacaggatctacctttggatcaacatttggtaaaccaacaaca
tcaggtttttctggctttggtactggacttggaaccacttcagcttttgggcaacagcaa
caacaacagcaacagcaacagcagcctcaaggaccaacaaatgcccatgaagcacttgta
gctgctgtattcaattgcaatgtatttggagatgaacgggaccaagttttggctaaatgg
aatttgttgcaggctcaatggggcactggtcaagcttactataatagaaatgcaccaccg
cttgagttaaatgagcaaaatccattatgccggttcaaggctgtgggttattcaagactt
ggcggtaaagaggacaaagatggacacgtagctatgatgtttaacaaaccagagcaggaa
ataaagagcaatcagcagggatttattacttctttggctagccttcttggcaataagccg
aatttagctgtcaatatcgagactgtcaaagccgtgtcagataaaaaatgtcaggtggtg
gtatacatagtggataaaggtgcgggtgggtgccatattagcgcgtctgaactgagctcg
tttcttaataatggagcggctcggaacacgctgactggtgcgggatgtaccagcataacc
ccggttacaagaccgacgccacagatgctagatcagtacttgcaggctccaccgccggga
atggatatgcgcctttggaaacaagcccaagctgacaaccctgatccagaaaactatatt
cctgtacctataattggattttctgagatcaaattccgtgcacaatgccaaacatcagaa
tctggtctgcaggccagctatcttcgtaaagcgtctgaaacattgagcgagttgcgcacg
cgtcgcgccgcctccgcagcaactcttgcgcaactaacagcgcgacttaactctctgaga
cacactttattacaggtgattgcacgtcaagaagttttaggacgtgtcggcgcagctcta
agtcccgaggaagaagcgactcgtgcgagattacaagaattagccacgcaactggccgcc
ccgcccctctataatggtcgattgaatgagctattatgtgcggtgcgacttcagcgtagc
gccagtgcgggcgcaccttatgagagatatcatttggacccaggtgcgcaagaagacgta
aaacaattcctgtctttccaacaacgtggtatggcccatttgatggatacagctaaaaca
gatcttgcagccctcaacactatcgcagaggggatggccaaacttgtccgggcctag
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integrated database retrieval system