KEGG   Pieris rapae (cabbage white): 111001199
Entry
111001199         CDS       T05162                                 
Name
(RefSeq) negative elongation factor D
  KO
K15181  negative elongation factor C/D
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111001199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prap03021]
    111001199
Transcription machinery [BR:prap03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     111001199
SSDB
Motif
Pfam: TH1 EF_HD
Other DBs
NCBI-GeneID: 111001199
NCBI-ProteinID: XP_045490651
LinkDB
Position
1:5633868..5640104
AA seq 571 aa
MPTQYEDERSWETSNAQYDDDNGEDVIDNPEEVLQECLEKFKTPDYIMEPGIFGQLKRYF
QAGGNPEQVIEQLSNNYSAVAQMANLLAEWLILAEVKVTEVQAMVENHLKEMIIKTFDPK
KADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEDYPDCLMLNFTIKLISDAGFQGEITS
ISTAAQQIEVFSRVLKSAIVGFLQSSDDWQNSVNECAKMVCHGAHTYVYSQVIVHILSQE
QRGGSIMKRLSQEITKCAQQSGHDVTPITLALTAGESWRGARTALAAMLSRGALNPADIS
VLFRAYNQPEPPPVHLLRIPQFLELLVDSLYKLGSKLNPEHKSKYTYLLAYSASVCEGVT
PGKPIKDELKPTLQAIEKIHAVCCSSVSSSELIAELPSLYHCIRFPVVGMGVLVWVECVV
TEPSYFKLCTEHCPVHLALLDEVASCHPLLHHRLLKLLIKLFESKQEDLEILVQLELRKM
LLDRMVNLLSRGCVVPVLLYIKNCTSRGDVDLSLIRYFLTEVLDAIAPPFTPEFVQLVLP
MVENEEITGTMRAEGENDPVSEFIVHCKAHY
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgcccactcaatatgaagatgaacggtcctgggaaacatccaacgctcagtatgacgat
gacaatggtgaagatgttattgataacccagaagaagtgctgcaagagtgtcttgaaaaa
tttaaaacacctgattacataatggagcctggtatatttggccaacttaagaggtatttt
caagctggtggaaaccctgaacaagtgatagagcaactgtctaataattatagtgctgtt
gcacagatggcaaatttactagcagagtggctgattcttgctgaagttaaagtgactgaa
gttcaagcaatggtagaaaatcatttgaaagaaatgattattaaaacatttgatcccaaa
aaggcagatacaatatttaccgaagagggagagacccctgcatggcttacagaaatgatt
gaacatccaacatggaggtccctaatttacagattagcagaagattatccagattgtctt
atgttgaatttcactataaagcttatatcggatgcaggttttcaaggggaaataaccagc
atttcaactgctgctcaacaaattgaagtattttcacgagttttaaaatcagctatagtt
ggctttttacagagttcagatgattggcaaaatagtgttaatgagtgtgctaaaatggtt
tgtcatggtgctcacacttatgtatacagccaagtcattgttcacattttatctcaagaa
cagaggggaggatccattatgaagagacttagtcaagaaattacaaaatgtgcacaacaa
agtggtcatgatgttacgccgataacgctagcgttgacagcgggagagtcatggcgcggt
gctcgcacagcgctggcagccatgttatctcgtggagcgctaaaccctgcagatatatca
gtcctgtttcgcgcatataaccagccggaaccaccacccgtacatttactgaggatacca
cagtttttagaactgcttgtggactccttgtataagctgggaagtaaactaaatcctgaa
cataagtcaaagtacacataccttctggcctattcggcgtcagtgtgtgaaggtgtgacc
cccggaaaaccgattaaagatgaattaaaaccaacattacaagcaattgagaaaatacat
gcagtctgttgcagttccgtgagttcaagtgaattgattgccgaattaccctcactctat
cattgtataagattcccagttgtgggaatgggagtgcttgtatgggtggaatgtgtggtc
acagagccatcttacttcaagttatgcaccgaacattgtcctgtgcacttagcattattg
gacgaggttgcttcctgtcatccattactccatcacagactgttaaaactattaataaag
ctgtttgagtctaaacaagaagatctggaaattttagttcagttggagttgcggaaaatg
cttttggaccgcatggtaaatttgttaagtagaggctgtgttgttccagttttactgtat
attaaaaactgcacaagccgtggagatgtcgacttatctttgattaggtattttttgaca
gaggtattggatgcaatagctcctccatttacacctgaatttgtacaattagtattacct
atggtggaaaatgaagaaattacaggtacaatgagggctgaaggtgaaaatgatcctgtt
tcagaatttattgttcactgcaaggcacattactaa

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