Pieris rapae (cabbage white): 111001226
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Entry
111001226 CDS
T05162
Name
(RefSeq) high mobility group protein DSP1 isoform X1
KO
K10802
high mobility group protein B1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03410
Base excision repair
prap04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111001226
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111001226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
111001226
03400 DNA repair and recombination proteins [BR:
prap03400
]
111001226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prap04147
]
111001226
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
111001226
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111001226
MMR (mismatch excision repair)
Other MMR factors
111001226
Exosome [BR:
prap04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111001226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
YABBY
Motif
Other DBs
NCBI-GeneID:
111001226
NCBI-ProteinID:
XP_022126716
LinkDB
All DBs
Position
17:2863849..2873612
Genome browser
AA seq
501 aa
AA seq
DB search
MGDRGATGGAWGARDDASWWSGGAGEIQHQQQINEDIARSTAAATHQLYTYKMTGGFSNT
SGDNSTPNFDYRLINNSSTRDESPQQTWWYAAGSVENQQTSSPTSQNQSTSDSEQNNQQA
NGIQQSHQVLQQQQQQAQKDQQSQMQQNQLQQQLEQHQNLQQAIQQAQNLQQSLHQNQQQ
TLQQMLQQQQLQQLQQQQQQQQQQQQQQQPQQQIKIEQTNNQQNIIQVTQAQAQALVAQA
ALQQQVVQTLQQQQQSLQEHLQAVQQQQIQAALQRQSATLQELQQQAQQQALISQNTPKT
RMPRSKPPNKPRGRMTAYAFFVQSCREEHKKKYPDENVVFAAFSKKCAERWSTMSEKEKM
RFHEMADQDKKRYDLEMKDYVPPKFTKVRGRKRQQPKDPNAPKRSLSAFFWFCNDERSKV
KANNPEYTMGDIAKELGRRWAAADSDTKTKYESLSETDKARYDREMTAYKKGSLVMGIQP
QQIMIEPEDEEVEFNGDDEYK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcggggagcgacggggggcgcttggggtgcgcgcgacgatgcctcgtggtgg
tcaggaggcgcaggtgaaatacagcaccaacaacagattaatgaagacatagcaagaagt
actgcagctgctactcaccaattatacacatacaaaatgactggaggcttttcaaacaca
agcggagacaattccacacctaattttgattatcgattaataaataattcaagtacacga
gatgaatcgccacaacaaacatggtggtacgctgcaggatcagttgaaaatcaacagacc
tcatcacctacgtctcaaaatcaatcaacatctgattctgaacaaaataaccaacaagca
aatggtattcaacaaagccatcaagtattacaacaacagcagcagcaagctcaaaaagat
cagcaaagtcaaatgcaacaaaatcagttacaacaacaattagaacaacaccagaactta
cagcaagctattcagcaggctcaaaatttacaacaatcattgcatcagaaccagcaacag
acattgcaacaaatgttgcaacaacaacaattgcaacagctccaacaacagcagcaacaa
caacaacagcagcagcagcaacaacaaccacaacagcagataaaaattgaacaaaccaac
aatcaacagaacataatacaagtgacacaagctcaagctcaggctctggttgcacaagct
gcattgcaacagcaagtagtccaaacattgcaacaacaacagcaaagcttacaagaacat
ttacaggctgtccaacaacaacaaattcaagctgctttgcaaaggcagtcggcgacactg
caggaattgcagcaacaagcacaacaacaggcgttgatctcacaaaacacacctaaaacc
agaatgccaaggtcaaaaccaccaaacaagccaaggggcagaatgacagcatatgctttc
tttgtacagtcatgccgtgaggaacataagaaaaagtatcctgatgaaaatgttgtattt
gctgcattctcaaagaaatgtgctgaaaggtggagtacaatgtcagagaaagagaaaatg
aggttccacgaaatggcggaccaagacaagaagagatacgacttagagatgaaggactac
gtaccgcctaagtttacgaaagttcgcggacgcaagcggcaacaaccgaaggatccaaac
gcaccgaagcgatcgctatctgctttcttctggttctgcaacgatgaaagatcaaaggtc
aaggcaaacaatccagaatacacgatgggtgacatcgcaaaggagttgggccgtcgatgg
gcggcggccgactccgatactaagacgaagtatgaatccttaagcgagacggacaaggcc
agatatgatagggaaatgacagcatacaagaagggttcactggtgatgggtattcagccg
cagcagattatgatcgaaccggaagatgaagaggtggagttcaatggtgatgatgagtac
aagtga
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integrated database retrieval system
