Pieris rapae (cabbage white): 111001262
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Entry
111001262 CDS
T05162
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111001262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prap02000
]
111001262
Transporters [BR:
prap02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111001262
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111001262
NCBI-ProteinID:
XP_022126771
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Position
4:5919811..5933623
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AA seq
594 aa
AA seq
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MQPPEPPPAHATTSASSTSANTQPATNKLPKSRSMVVSLTPPRERETWAKKAEFLLAVVG
FAVDLGNVWRFPYICYQNGGGAFLIPYCVMLLFGGLPLFFMELALGQYHRCGCLTLWKRI
CPALKGVGYAICMIDIYMGMYYNTIIGWAVYYLIASLASINSELPWTSCDNDWNTPLCTP
VTSPLANISSSTPAKEFFERNVLEQHRSNGLDDMGPIKPSLALCVFGVFVLVYFSLWKGV
RSAGKVVWVTALAPYVVLLILLARGVTLPGATEGIRYYLTPEWHKLQNSKVWIDAASQIF
FSLGPGFGTLLALSSYNKFNNNCYRDAIITSSINCLTSFLAGFVIFSVLGYMAHVQNKSI
EEVGLEGPGLVFIVYPEAIATMTGSVFWAIIFFLMLITLGLDSTFGGLEAVTTALCDEYP
RALGRHRELFVAGLLVFIYICALPTTTYGGVYLVDLLNVYGPGLAILFVVFAEAAGVCWV
YGVDRFADDVKSMLGHKPGWFWRACWVYISPVFLLVLFVFSVLAHAEMLGGEYVYPPWSI
SVGWALTGTTVSLIPLYIVYLFIITPGSFYTRLKTIKRPLVTTIPPTEHALCSL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccccccgaaccgccacccgcccacgctaccacatccgcttcctctacttccgct
aacacgcagcccgcaaccaacaaattgcctaaaagccggtcaatggtggtgtcgctgacg
ccaccacgagagcgagagacatgggcaaagaaggcagagttcttgttagctgttgtagga
ttcgcggtagatctgggcaatgtctggaggtttccctatatctgttaccaaaacggaggc
ggtgcgtttctgattccttactgcgtgatgctgttgttcggtggtctacctctcttcttt
atggagctggcactcggtcagtaccatcgctgcgggtgtctcacactttggaagaggatt
tgccccgctcttaagggtgtgggctacgcaatctgtatgatcgacatctatatgggtatg
tactacaacacgatcatcggttgggccgtatattacctgattgcctctcttgcctccatc
aattccgagctaccctggactagctgcgacaacgactggaacacacctctttgcacaccc
gtcacttcccctctggcgaacattagctctagcacacccgcaaaggagttctttgaacgc
aatgtattggagcaacaccggtcaaatggtctagatgatatgggtcctatcaaaccatct
ttagctctgtgtgtttttggagttttcgtgttggtctacttctcactatggaaaggagtt
cgcagtgccgggaaggtggtatgggtcacagctcttgcaccatacgttgttctgctaatt
cttctcgcgagaggtgtgactctaccgggagcaacagaaggcattcgctattatcttact
cctgagtggcacaaactacaaaattctaaggtgtggatagacgcggcatcacaaatcttc
ttctctttgggtcctggattcggcacgcttctggctctatcaagttacaacaaattcaat
aataactgttatagggatgctatcatcacttcatctatcaactgtcttacaagcttttta
gcaggattcgtcatcttctcagtcttgggatatatggcacatgttcagaacaaaagcatt
gaagaagtaggtctagaaggtccagggctagttttcatcgtctacccggaggccatcgcg
accatgacaggctccgtcttctgggctataatcttctttttgatgcttatcacactagga
ctggatagtacctttggaggtctagaggcagtaacaactgcgttatgcgacgaatatcca
cgggcattgggaagacatcgcgaactatttgtggccggtcttctggtcttcatatatatc
tgtgcacttcccacaaccacatacggcggcgtatacctggtggacttgctgaatgtatac
ggtccagggctggccatactcttcgtggtattcgcagaggcagcgggcgtatgttgggtg
tatggagtggaccggtttgctgacgacgttaaatctatgctcggtcacaagcctggctgg
ttctggcgcgcttgctgggtttacataagcccagtgttcctgctggtgctcttcgtgttc
tcggtattggctcacgcggagatgttgggtggggagtatgtgtacccaccctggtccatc
tccgttggctgggctctcaccggcacaaccgtctcactgataccactttacatcgtttac
ctgtttataattacacccggctctttctatacgcgtttgaagaccatcaaacgtccgcta
gtgacgaccataccgccgaccgagcacgctctgtgctcgctgtga
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