Pieris rapae (cabbage white): 111001309
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Entry
111001309 CDS
T05162
Name
(RefSeq) spectrin beta chain isoform X2
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04517
IgSF CAM signaling
prap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111001309
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111001309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prap04812
]
111001309
Cytoskeleton proteins [BR:
prap04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111001309
Intermediate filaments
Intermediate filament-binding proteins
111001309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DUF2498
CAMSAP_CH
DUF5424
Motif
Other DBs
NCBI-GeneID:
111001309
NCBI-ProteinID:
XP_022126857
LinkDB
All DBs
Position
19:complement(6264201..6327653)
Genome browser
AA seq
2383 aa
AA seq
DB search
MTTDISVSRWDPSIGHGQEIIDEIEYDGGNSSSRLFERSRIKALADERESVQKKTFQKWV
NSHLVRVGCRIGDLYVDMRDGKNLIKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLR
EQRVHLENMGSHDIVDGNPRLNLGLIWTIILRFQIQDITIEETDNKETKSAKDALLLWCQ
MKTAGYNNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLHRSNPMHNLNNAFNVAEDK
LGLTKLLDAEDIAVEHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENEKMM
QEYETLTSDLLQWIERTIEALGDRTFANSLEGVRQQLIQFANYRTVEKPPKFVEKGNLEV
LLFTLQSRMRAANQKPYTPREGRMIHDINRAWERLEKSEHERELALREELIRQEKLEQLA
ARFNRKAQMRETWLSENQRLVSQDNFGFDLTAVEAAAKKHEAIETDIFAYEERVQAVVAV
CGELQAERYHDIERVCARRDNVLRLWAYLLELLRARRARLELSLHLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHALVEADINVLGERVKVVVGQSQRFLEQEEGGYRP
CDPAITVERIQQLENAYAELVHLAVERRKRLEDSRKLWQFYWDMADEENWIKEKERIVSV
DDIGHDLTTVYLLISKHKALEADVASHEPQLMDVAAVGDELISQGHFGADRIQERLRDIL
SQWNHLLDVVSLRNNRLDAAVRYHQLFADADDIDQWMLDTLRLVSSEDTGVDEAQVQSLL
KKHKDVTDELKHYANVIQQLKQQASELSPEDASSAEVRDRLGAMDARLNELSELARLRKQ
RLLDALSLHKLLAEADAADQWIAEKDRMLDTMHPPKDIDDVEIMKHRYDGFDKEMNANAS
RVAVVNQLARQLIHVEHPEAPRITERQAQLNQAWSGLREKAEAKKDELKSAQGVQTFYIE
CRETVSWIEDKKRILQQTDNLEMDLNGVMTLQRRLSGMERDLAAIQARISSLEDEANSIE
GEHPEEARLIRERVVTITENWDQLTQMLKERDSKLEEAGDLHRFLRSVDHFQAWLTKTQT
DVASEDIPSSLPEAEKLLSQHQTIKEEIDNYKDEYAKMMEYGEKITAEPSTADDPQYMFL
RERLKALREGWAELQQMWENRQQLLTQSLELQLLQRDARQAEVLLAHQEHRIAKIEPPAN
LEQAENMIKEHEAFLTTMEANDDKINSVVQFANRLVEERHFDADKIQRKAESIRARRDAN
RDKAVEQMDKLQDQLQLHQFLQDCDELGEWVQEKNVTAQDDTYRSAKTIHSKWTRHQAFE
AEIAANKERLFAVQNAAEELMKQKPEFVEIISPKMTELQDQFENLQTTTKDKGERLFDAN
REVLLHQTCDDIDSWMNELEKQIENTDTGTDLASVNILMQKQQMIETQMAVKAKQVTELE
TQAEYLQKTVPDKMEEIKEKKKSVEHRFEQLKAPLLDRQRHLAKKKEAFQFRRDIEDEKL
WVHEKMPLALSTDYGNSLFNVQMLQKKNQSLKTETDNHEPRILTVISNGQKLIDEGHEDS
DEFKRLIEELTARWRELKDAIEQRKNNLSQWGKAHQYLFDANEAEAWMSEQELYMMVEDR
GKDEISAQNLIKKHEILEQAVDDYANTIRQLGETVRQLTSEEHPLSEQISVKQSQVDKLY
AGLKDLAGERRAKLDEALRLFQLSREVDDLEQWITERELVASSQELGQDYEHVTLLWERF
KEFARETQSVGSERVATAERIADQMIAMGHSDNATIAQWKEGLKETWQDLLELIDTRTQM
LAASRELHKYFHDCKDALQRVNEKARGVSDELGRDALSVSALQRKHHNFMQDLSTLQNQV
ESINAECARLGASYAGEKAAEITRRAGEVSEAWASLQAACEARRAKLEDADQLYRFLSQV
RTLTIWMDDVVRSMNTGEKPRDVSGVELLMNNHQSLKAEIEAREENFAVCIALGRELLAR
QHYASSDIRDKLHLLTDQRNALLRRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYL
MSQELGHTIDEVESLIKKHEAFEKSAAAQEDRFSALQRLTTFEVKEMKRRQEAAAAAERE
RQEKEAAEAAAQAAAQDAVDRASSPEPEQPVVRRTSTKAAEKAQERPHSQPETPSPETPT
TPPPERQETPRPSTSKQTPVKPARLSTPGTSSTPNTPSTSGKVKSRSRSKSPFRSFRWKA
AKKLLSGTHHSDDEEGASPGSEDEGVEGMLVRKHEWESAAKRASNRSWDKVYVVAKDGRM
SFYKDAKAYKAAPEQHWRGEAPLDLNGAVVEQAANYTKKKHVFRLRLSNGAEFLLQAHDE
SEMSGWVDALRSRTAAPAPRSHTLPAPHQAEPKRRSFFTLKKN
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgatatatcggtgtcccgctgggacccgtccatcggccatgggcaggagatc
atcgatgagatcgagtacgatggcggcaattcatcctcaaggctcttcgaacgatcgcgc
atcaaggcgcttgctgacgaacgagagagcgtccaaaagaagacgttccagaaatgggtg
aattctcacttggtgcgggtggggtgccgtatcggcgacctctatgtggacatgcgagat
ggcaagaacctcatcaaactactcgaagttctctcgggagagagattgcctcgaccaacg
aaaggcaagatgcgtattcactgcttggagaatgttgacaaagctctgcagttcctgcgg
gaacaacgagtacacctggagaacatggggtctcatgacatagtcgatggaaaccctcga
cttaacctcggacttatatggaccattattttgcggttccagattcaagacattacaatt
gaagagaccgataataaagaaacgaaatcggcgaaggacgctctgctactctggtgtcag
atgaagacggctggttacaacaacgtcaatgttcgtaacttcacaacgtcctggcgcgat
ggtttggccttcaatgcgatcattcacaagcatagaccagatttgattcagtttgaaaaa
ctgcacagaagtaatccgatgcacaacttgaacaatgcctttaatgttgctgaagataag
ttggggcttaccaagctgcttgatgctgaagatatcgcggttgagcaccctgacgagaag
tccataataacatacgtggtgacgtactaccattacttcagcaagatgaagcaagaaact
gttcaagggaagcgtattggcaaagttgtgggcatcgctatggagaatgagaagatgatg
caggagtacgagacacttactagtgatcttctgcaatggatcgagcgtaccatcgaagcc
ctcggagacagaacattcgctaactcattggagggagtgagacaacaactgattcagttt
gctaactatcgtactgtggagaaaccgcccaagtttgtagagaaaggaaacttggaagta
ctcttattcactctccagtctcgtatgcgagcggccaatcagaagccgtatacgccacgc
gagggtcgtatgatacacgacatcaatcgtgcttgggaacgccttgagaagtcggagcac
gaacgggaattggctttgagagaagagttgataagacaggagaagttggagcagttggct
gctagattcaatcgcaaggctcagatgcgtgaaacatggttatctgagaaccaacgattg
gtcagtcaagataactttggcttcgatttaacagcagtggaggcggcagctaagaagcat
gaagctatcgaaactgatatcttcgcgtacgaggaaagagtccaggctgtggtcgctgtt
tgtggggaactacaggccgaaaggtatcatgacattgagcgtgtgtgcgctcgtcgcgac
aacgtactacgtctgtgggcgtatttgctcgagttgcttcgtgcacgccgagctcgtctt
gaactaagcctgcatctgcaacagaacttccaggaaatgctgtacatcctggactccatg
gaagaaatcaagatgcgtctcctgaccgatgactacggcaaacatttgatgggagtggag
gacttgctgcagaagcatgcattagttgaagctgacatcaacgtattgggagaacgtgtg
aaggtcgtagtaggtcaatctcagagattcctggagcaagaggaaggtggataccgtcca
tgtgaccctgccatcaccgtagagagaattcagcagctggagaatgcatatgctgaactg
gttcatctggctgttgagagaaggaagcgacttgaagacagccgtaaattgtggcagttc
tactgggacatggctgatgaagagaactggattaaggagaaggagaggatcgtctccgtt
gatgacattggacatgatcttactacggtttacctgctgatatccaagcacaaggcgctg
gaagcggatgtggcatctcacgagccgcaattgatggatgtggccgctgttggagacgaa
ctcatctcgcagggacactttggagccgataggatacaggagcgtctccgagacatcctg
tcgcaatggaaccaccttttggatgtggtgtctctccgtaacaaccgattggatgcggct
gtacgttatcaccagctgttcgctgacgctgatgatattgaccaatggatgcttgatact
ttgcggttggtttcatccgaagacactggtgtagatgaggctcaagtgcagagtctattg
aaaaaacacaaagacgttacagacgagctgaaacactatgccaacgttattcaacaactt
aagcaacaagcaagcgaacttagtccggaagacgcgagcagcgctgaagtacgcgatcgt
ttgggagcaatggacgcgcgtctcaacgagctctcggaactcgcacgtctacgcaagcag
cgtctactcgacgccctgtctttgcacaagctgttggctgaagctgatgcggcggaccaa
tggattgcggagaaggatcgaatgctggatactatgcatccaccgaaggatattgacgat
gtggagattatgaaacacagatacgatggcttcgacaaggagatgaacgctaacgcgtca
agagtggctgtggtgaaccagttggctcgtcagctcattcacgtggaacaccctgaggca
ccgcgtattacagaaagacaggctcagctcaaccaggcctggagtgggcttagggagaag
gcggaggctaagaaggacgagttgaaatcggctcaaggtgtacaaaccttctacattgag
tgccgtgagaccgtctcatggattgaagacaagaaacgcattctgcaacagaccgacaat
ctggagatggatcttaacggtgtgatgactctccaacgtcgtctctcgggaatggagcgc
gatttagcagccattcaggcccgcatcagttcattggaggacgaggccaattccatcgaa
ggagaacatccggaagaagcaaggcttatccgggaacgcgttgtcactattacagagaac
tgggatcagcttacacaaatgctcaaagagcgcgattcaaaactggaagaagctggagat
ttgcatcgcttcttgcgttctgtggatcacttccaggcctggcttacgaagacccagacc
gatgttgcatcagaagatattccatcaagtcttccggaggcggagaagctcttgtctcaa
caccagaccatcaaggaagagatcgacaactacaaggacgagtatgccaagatgatggag
tatggagagaagatcactgccgaaccatcgacagcagacgacccgcaatacatgttcctt
cgagaacggctaaaggctctccgcgaaggatgggcagagttgcagcagatgtgggagaac
cggcagcagttgctcacgcagtccctcgagctgcaattgctgcagagagatgctcgtcag
gctgaggtgcttctagcacatcaggagcatagaattgctaagatcgagccaccagcgaac
ttggaacaggctgaaaatatgatcaaagagcacgaagccttccttaccacgatggaagcc
aacgatgacaagattaactctgtcgtccagttcgccaatcgcctcgtcgaggagagacac
tttgacgcagacaagatccaacgcaaggctgagagcatccgcgccagacgagacgctaat
agagacaaggctgtcgaacagatggacaaacttcaagaccaacttcagttgcaccaattc
cttcaagactgcgacgaactcggcgagtgggtccaagaaaagaatgtcaccgcccaagat
gacacttaccgctcggcgaaaaccatccactccaagtggacccgccatcaagctttcgaa
gcggaaattgccgccaacaaggagaggctcttcgcggtacagaacgcggccgaggaactc
atgaaacagaaaccggagttcgtcgaaataatttcacccaaaatgaccgaactgcaagac
caattcgaaaaccttcaaacgacaacaaaagacaagggcgaacggctcttcgacgccaac
cgtgaagttctcttacaccagacgtgtgacgatatcgattcctggatgaacgagctggag
aaacaaatcgagaacaccgatacgggcactgatctggcatctgtgaacattctcatgcag
aagcaacagatgatcgagactcagatggcagtcaaggcgaaacaggttaccgagctggag
acacaagccgagtacctccaaaagacagtgccagataagatggaggagatcaaagagaag
aagaagtctgtggaacatagattcgaacagctcaaagctcccttactggatcgtcaaaga
cacttggccaagaagaaggaagccttccaattccgccgcgacatcgaggatgagaaacta
tgggtacacgagaagatgccgttggctttgagcaccgattatggaaactcactgttcaac
gtacagatgttgcaaaagaagaaccagtccctcaaaacagagacggataaccatgagccg
aggattttaactgtcatctccaatggccagaagttaatcgacgaaggccacgaagactcg
gatgaattcaagaggcttattgaagaactcacggctaggtggcgagaacttaaagacgct
atcgaacaacgcaagaacaatctgtcacaatggggcaaggctcaccaatacctgttcgac
gcgaacgaagccgaggcctggatgagcgaacaagagctgtacatgatggtagaagaccgt
ggaaaagacgaaatttcagcacaaaaccttatcaagaagcacgaaatattggagcaggcg
gtcgatgattacgccaacactattcgtcagcttggtgaaactgttcgtcagttgacgagt
gaagaacatcctctgagtgagcaaatatccgtgaagcaatcccaagtggacaagctgtac
gctggtcttaaagacctggctggcgaacgaagagctaagctggatgaagccttgaggtta
ttccagctttcgcgtgaagtggacgatcttgagcaatggatcactgagagggagctagtt
gccagctcacaggagcttgggcaagattatgagcatgtcactctattatgggagcgtttt
aaagagttcgcccgtgagacccaatcagttggttcagagcgggtcgccacagctgaaaga
atcgcggaccagatgatcgctatgggacattctgacaatgcaaccatcgctcagtggaag
gaaggcctcaaggaaacctggcaggatcttctggagctcattgatacgaggacacagatg
ttagcggcgtcacgagagctgcacaaatacttccacgactgcaaggatgctctgcaaaga
gtgaacgagaaggcaagaggagttagcgacgaactcggtcgcgatgccctctctgtctcc
gctttgcagaggaagcatcacaacttcatgcaggatctatctacgctgcagaaccaggtt
gaatctattaacgccgaatgtgctcgtcttggcgcgtcatatgccggggagaaggcagcc
gagatcacccgaagagctggggaggtttccgaagcgtgggcgtctctccaggccgcgtgt
gaagccagaagggccaagttggaagacgctgatcaactctaccgcttcctgagccaagtg
cgaaccctcaccatatggatggatgacgttgtccggtcgatgaacactggggagaagccg
agagatgtaagcggcgtagagcttcttatgaacaaccaccagtccctaaaagcggagatc
gaggcccgcgaagagaactttgcggtgtgcatagctcttggaagagaattactcgcaagg
caacattacgcgtcgtctgatataagggacaagttgcatctcctcactgatcagaggaac
gccttgctgagacgctgggaggagagatgggaaaatcttcagcttatcctggaagtgtac
caattcgctcgcgatgcggcagtggccgaagcctggctgatcgcccaagagccttacctg
atgtctcaggaactgggtcacaccatcgacgaggtggagagccttatcaagaagcacgaa
gccttcgagaagtcggctgccgcccaagaagaccgcttcagcgcattgcagaggcttacc
actttcgaagtgaaagagatgaagcgtcgccaagaagcggctgcggctgccgagagggag
agacaggagaaggaagctgccgaagccgcggctcaggctgcagcgcaggatgctgtcgac
cgtgcttcttctcctgagccagaacaacccgtcgtaaggagaacatctactaaagcggct
gagaaggcccaagagagaccgcattcccagccagaaaccccaagccccgagactccgacc
acgccccctcccgagcggcaagagacgccacgcccgtccacctcgaaacagacgcccgtt
aaacccgcacgcctttccacacccggaacgagctcgacaccgaacacgccgtcgacttct
ggtaaggtgaagtctcggtcgcgaagcaagtcgccgttccgaagcttccgttggaaagcc
gctaagaaactgctcagtggaacgcaccatagtgatgatgaagagggcgcaagtcccgga
agtgaggacgaaggcgttgaaggcatgttggtccgcaaacacgagtgggaatctgccgct
aagcgtgcatcaaacagatcgtgggacaaggtgtacgtagtagcaaaggatgggcgtatg
tccttctacaaggacgcgaaggcctacaaggcagcgcccgaacaacactggcgcggagag
gcacccttggaccttaacggtgctgttgtggagcaagctgccaactacactaagaagaag
catgtcttccgtctaagattatcgaacggcgcggagttcctccttcaagcccacgacgag
tcggagatgtcgggttgggtggacgccctgcgctcgcgcaccgccgcccccgcgccccgc
tcccacacgctgcccgcccctcaccaggccgagcccaagcggcgctccttcttcacgctc
aagaagaactaa
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integrated database retrieval system
