KEGG   Pieris rapae (cabbage white): 111001635
Entry
111001635         CDS       T05162                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111001635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prap03400]
    111001635
Enzymes [BR:prap01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     111001635
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     111001635
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase mRNA_cap_enzyme PrlF_antitoxin Spectrin_5 BRCT_2
Other DBs
NCBI-GeneID: 111001635
NCBI-ProteinID: XP_022127272
LinkDB
Position
19:complement(4438868..4443011)
AA seq 987 aa
MTDFTPYYVDRAKVGRASCKGCKGNCPSGEIRIAKVVPSPYGENQQMKSWHHVDCFMNVF
LKQRPATKRIDSIDDIGNWASLSKEDQEFIIKKINEMEKLYAEKHSGKYIAKVLKNVSTG
PKNTKTETMSSNQSEILTEDNKFSTFHTLCKKISRVDAYTDKTAAVNNFFTKGCTDKFEG
DLVLWCKLLLPQVSKRVYNLKSKQLVKLFSRIFIIDHDDMLTHLEQGDVADTIQHFFSKS
KAINPASESTLTIHDIENFLEDLSKLTKEEEQIYQFKKIVKKCTLNDIKMLVRLIKGDLR
INAGPKHILEGVHPDAYKVFQTSRDLDLVIDKVLKTNLVKHKYASQKSVHANLSLMTPIL
PMLAEACKSIEMAMKKCPNGMFSEIKYDGERVQVHKKGKEFKYFSRALKPVMPHKVNHFK
DYLPQAFPKGEDMILDAEVLMVDVKTGKPLPFGTLGVHKQSEFKDAQVCLYIFDCLYYNG
EVLMDMPIKRRRQFLYENMVEVKNHIMFSEQQLIRKPADLATMIAEVLQLGLEGLVLKDL
ESTYEPGKRHWLKVKKDYLFDGAMADTADLLVLGAWFGTGKKGGMMSVFLMGCHDRRRNK
WVTVTKVHTGHDDNTLERLQKELAPLMMKISQDYNKVPNWLDCNKGMVPDFVAMDPTKQP
VWEITGTELTKANLHTADGISVRFPRVTRIRNDKDWETATNLEELKNLFKTSKEKTDVSL
LNKLAATASSSEPPTKKQKKNSIGVNEEPRTSPKSHKTPTKMGNLDSFIQKDIKKSPKDT
KPLNESFTQKQENSISVKSENDSDTEKSIKDDSFHTKKKKRKRALEDSNSSIDSRNNSTI
DESVKKIKIDKILKDDSKDSDTNLNSDKTIPEYICKIEDDFPDDPLPDVFLGKKLGFYPD
FISFPEDERNDFERHWIAYGGIVIKNIKHMDVDYVVHNDEEIQFKNMLKLKRKLVGDVRH
VTKYWLINCISDVELLNTVHYAVTVIP
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgacggattttacaccatattacgtagatcgcgcgaaagttggcagagcgtcatgcaaa
ggatgtaaaggtaactgcccaagtggcgaaatccggatcgctaaagtagtgccaagtcca
tatggagagaatcagcaaatgaaatcatggcaccatgtcgattgcttcatgaatgttttt
ttaaaacaacgtccggccaccaaacgcatagactccatagacgacatagggaactgggca
agtttaagcaaagaagatcaggaattcattataaaaaaaattaatgaaatggaaaaatta
tatgcagagaagcatagcgggaaatatatagctaaggtactgaaaaatgtatctactggg
cctaagaacactaaaactgagacaatgagtagtaatcagtcagaaatactgactgaagac
aacaaattttcaactttccatacactttgtaaaaaaatatctagagtagatgcatataca
gataaaacagcagctgtaaataatttctttactaagggatgtactgataaatttgaaggt
gacctggtcttatggtgtaaattgttactacctcaggtgtcaaaacgagtgtataactta
aagagtaaacagctagttaaactattttctagaatttttattattgatcatgatgatatg
ctaactcatttagaacaaggtgatgttgcagacaccattcaacactttttctcaaagtcc
aaggccataaatcctgcatcagaaagcactttgacaatacatgacattgaaaactttttg
gaggacttatcaaaacttacaaaggaggaagaacagatatatcaatttaaaaaaattgtt
aagaagtgcactttaaatgacattaaaatgttagtaagattaattaaaggagatttgaga
ataaatgctggtccaaaacatatactagaaggcgtgcaccctgatgcctacaaagtattt
caaacatctcgggatttagatttagtcatagacaaagtgcttaaaacaaatttggttaaa
cataagtatgcttctcagaaatctgttcatgcaaatttaagtctcatgactcctattctg
ccaatgttagcagaggcctgtaaatcaattgaaatggctatgaaaaagtgtccaaatggt
atgttttctgaaataaagtatgatggtgagcgtgtccaagttcataaaaaaggtaaggag
tttaagtatttttctcgagctctaaagccagtaatgccacataaagtaaatcattttaaa
gactatttaccacaagcatttccaaaaggggaagatatgattttggatgcagaagtatta
atggtagatgtgaaaacaggaaaaccattaccgtttggcactttaggtgtacataaacag
tcagagtttaaagatgcccaagtatgcttatacatatttgactgtttgtattacaatggt
gaagttctgatggatatgcccattaaaaggagaagacaatttttatatgaaaatatggta
gaagttaaaaatcatataatgttttctgaacagcagttgatcaggaaacctgctgattta
gctaccatgattgcagaggttctccagttaggattagaaggtcttgtattgaaagatcta
gaatctacatatgagccaggcaagagacattggcttaaagtaaaaaaagattatttattt
gatggtgccatggcagacactgctgatttattggttttgggagcatggtttggaactgga
aaaaaaggtggtatgatgtctgtatttctcatgggctgccatgacaggcgaaggaataag
tgggtaactgtgaccaaagtgcatactggacatgatgataataccctagagcgattacaa
aaagaattagcacctttaatgatgaaaatatctcaagactataacaaagtacctaattgg
ctggattgtaataagggaatggttcctgattttgtagcaatggatccaacgaaacaacct
gtttgggaaatcacaggaacggaacttacaaaagcaaatctccatactgctgatggtatt
tctgtcagatttccacgagtcactagaataagaaatgataaagattgggaaactgcaacc
aacttggaggaactgaaaaatttattcaaaacttcaaaagaaaaaacagatgtctctctc
cttaataaattagcagcaaccgcatcttcaagtgaacctcccacaaaaaagcaaaagaaa
aactctataggagtgaacgaagaaccaagaacatctccaaaatcacataagactcctaca
aaaatgggtaatttagattcatttatacagaaagatattaaaaaatcaccgaaagacaca
aaacctctcaatgaaagttttacacagaaacaagaaaatagcatttctgtaaaatctgaa
aatgacagcgatacagagaaatctataaaagacgacagttttcatacaaagaaaaaaaaa
agaaaacgtgctttggaagactcaaattcatcaattgacagtagaaataattctacaatc
gatgaaagtgttaaaaagataaaaattgacaaaattttaaaggatgattctaaagattca
gataccaatttaaatagtgataaaacaattcctgagtatatttgcaaaatcgaagatgat
tttcctgacgatccattgccagatgtttttcttggcaaaaaacttgggttttatccagat
tttattagttttcccgaggatgagagaaacgattttgaacgccattggattgcctatggc
gggattgtaatcaagaatataaaacacatggatgttgattatgtagttcacaatgatgaa
gaaatacaatttaagaatatgttgaaattaaaacggaaattggttggtgatgtacgacat
gtgacaaaatattggttaattaattgtataagtgatgtggaacttttgaatactgtacac
tatgcagtaacagttattccatga

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