Pieris rapae (cabbage white): 111001844
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Entry
111001844 CDS
T05162
Name
(RefSeq) uncharacterized protein LOC111001844
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prap03009
]
111001844
04121 Ubiquitin system [BR:
prap04121
]
111001844
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111001844
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111001844
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111001844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
FANCL_C
zf-rbx1
zf-RING-like
RINGv
zf-ANAPC11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111001844
NCBI-ProteinID:
XP_022127578
LinkDB
All DBs
Position
2:complement(78601..89301)
Genome browser
AA seq
1682 aa
AA seq
DB search
MGGKSKQSQRTKNNARPSSSGRSAELLNNVINTDSTFGALSTGKMVPALFPTMTPIIDNI
LSNEFILAFKKLNKKDPITRIKALQELLELINKSDIEEVVAALPNWTVFYLMLTVDNDRK
VRELTQACNGAIFSRIGRRAAPHLRRLLPVWLLAVHDDYGPSRHTASTYLNSTFPGAKLS
EAIAFCKTEIMALVLDNLTGNPEAILNKKIEAPEERQSAASRVRAGSLGALGLLLRLLPP
HLPLDPALQPLLSAASFWKLHAHDDHHVRAAWFEAAGRLIEREGGRLGDAVGGRLSAAIL
AQPERRPDVAVARWAALLMMLRVEEWQKWVQKKDLLLKRLLDTIENGAWGDASLAGEILL
PLLARLPEDLRSKELYRDLTRALFAGLELKSILNSKSERQIWITSVADFLRFLSIQRHDY
VTEAVSEAHRTWLQKIFASPEPAARPHLIKYSVGKMASLVKYWMRRSTETGDDECDKMIR
CFWQNFGATVVAQIDAVSPSDDDVAALLNLHTVAFESLSAGDGKSEKVLRFDDEAADEPE
RRDAGPEDEAVAERFARGVTELLSVGCRAWLECAERRELRAVFPPLVSALRRLGDERLFA
EVARAKVGGGPYALYERLWRAWLRGEALRCRALVQLLFLAATHFTDRELELAYDSFDGMS
PVVVEWIISSSLDLHRRPAGEWLRGRLVAATLVSLSRRRRPDADRLVLDCLEPRHGEVRV
SEEAVAGVVRTLSEPPVRRRAAADVCRTLAGTDRASIAIPLAELLFDRSLDTVGDEHPTE
ADEREEGGEEGEGWQVLCGPRLAAHARRRLHALLANTDESLDPVRIERWVSLCPPLLAAG
DFVETAKGLLAVDVERSTRTVEGFALRADCVSGRLLCPVRDERARGLSEIVEREETEDCR
DPDSRDVAPFVRALVFRAGLLCEMLRGRSEEAEPAPTGECFREAFAEVLHDAAVLRSLCQ
GYVHAPFYESVKRCKERVEAAIDEATSLLREEDAKELAKSLTQRAFDAGYYWAFARRLYL
EKTGTKGIDGVRDEPGGDAGSDGAVLDPLLLDKIVTRSGFFHVTQVQGGVRGRYLSAIRG
WYLAQGFASDLADSERKELFVRKLTSALASAGLEPLMDDYYKYCDKMFNDRDYWKVPWSV
VSCEIGVLDLLREAVEAGAWDLDAATWDFANIALCSALASLAGTPPDLLPRTKIAAAGRA
ALGLFASVAGFVESVREESERRLPSAHVASLPAEWRDIFAPAAHTDVSTLQARLLERAVA
PGRGRPTAAETALADAVAAALPFVRWELTAAARRDADLSLERLTGTALEALSRDASAPVH
RLAYAALATLAKPLVLEDVAKLKSASERESEEEDAKLSLSLRPYLTALKRRAPDLLPDDG
RPEEEPPAEWWDGARGFLLTALAALRHADLAGRDLVHHYVECLGVSETIGDVLSVAGRAL
PAEVKRASGPDGGALPPRVADYFTTDPPLSAEPDERTAAGRVACRVVLCAARSAGAAVRA
HWSASNPRSAEAFRRLVALAVAQPLIEEQLRRLKERAREDLEDVEVTVSRVGGQVEVRAR
ARVEERWVEMTVTLGAAHPLEPPRVEAPPQRSPASQLHWVRVYLAYQNGWLVTALRLWSE
ALRCRVDAAAQCYICYCRLHPTTARLPNVPCHTCNNRFHSACLRKWFKTSQKSNCPLCRT
VF
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaaatcaaaacaaagtcaaagaactaaaaataatgccagaccatcaagtagt
gggcgcagtgcagaattgcttaataatgttataaatacagactctacatttggagcttta
agtactggaaaaatggtgcctgctctgtttccaacgatgacacctataattgacaatatc
ttatctaatgagtttatactagcctttaaaaaacttaacaaaaaggatcccattaccaga
ataaaggcattacaagagcttttggagttgattaataaaagtgatatagaggaggtagtg
gctgcccttcctaattggactgttttttacttgatgctgactgttgataatgatcgaaaa
gttcgggagcttacacaggcttgcaatggtgcaatattcagccgcattgggcggcgcgct
gctccgcacttaagacgtctgctacctgtgtggctgctggccgttcacgatgattacgga
ccctcaagacatactgcctccacttatctcaatagtactttcccgggagcaaaattatct
gaagcgatagcattttgcaagacagagataatggcacttgtcctggacaatctaaccgga
aatcctgaagcaattttgaataagaagatagaggcgccggaggagagacagtcggcggcg
tcgcgagtgagagccggcagtctgggcgccctcggcctgctgctgcggttgctccctccg
caccttccgctggatcctgcgctgcagccgctgctgtcggccgccagtttctggaagctt
cacgcgcacgacgaccatcacgtcagggcggcatggttcgaagccgcggggcgcctcata
gagcgcgagggcgggcggctgggcgacgcggtcggcgggcggctgagcgcggccatcttg
gcgcagcccgagaggaggcccgatgtggccgtcgctcgctgggccgcacttctgatgatg
ctgcgcgtcgaggagtggcagaagtgggtgcagaaaaaggatctcctgcttaaaagactg
ttagacaccatagagaacggcgcctggggtgacgcgagcctggccggtgaaatcctgctg
ccgctgttggcgcggttgcccgaagacttgcggtcgaaagagctgtaccgcgacctgacg
agggcgctgttcgccggtttagaactaaagagtatattaaactcgaaaagcgagcgtcaa
atttggatcacgagcgtggcggacttcttgaggtttctctccattcagagacacgactac
gtcacggaagccgtttcggaggctcacaggacatggctgcagaagatattcgcctcgccg
gagcccgcggcccgaccgcatctgatcaaatattcggtcggcaaaatggcctctctggtc
aaatattggatgcgacggtcgaccgagacgggagacgacgagtgcgacaaaatgatcaga
tgtttctggcaaaacttcggagccaccgtcgtcgcgcagatagacgccgtctcgccgtcc
gacgacgacgtcgccgctcttttgaacctgcacacggtagccttcgagtcgttgagcgcc
ggagacggaaagagcgagaaggtgctgcgcttcgacgacgaagcggccgacgaacccgag
agacgcgacgcgggtcccgaggacgaagccgtcgcggagcggttcgcgcgcggagtcacc
gagctcctgagcgtcggctgccgtgcgtggctggagtgcgcggagaggagggagctccgc
gccgtcttcccgccgctggtttcggcgctgcgccgcctgggcgacgagaggctgttcgcc
gaggtggcgcgggcgaaggtcggcggaggcccctacgcgctgtacgagcggctctggcgc
gcctggctccgcggagaggccctgcggtgccgcgcgctcgtgcagctgctgtttctcgct
gcgacccatttcaccgaccgtgaactggaactcgcgtacgactctttcgacgggatgtcg
ccggtcgtagtggagtggatcatctcgtcgtcgctggacctgcaccgaagaccggccggc
gagtggctgcggggtcgcctcgtggccgcgacgctggtgtcgctgagtcgccggcgacga
cccgacgcggaccgactcgtgctggactgcctcgagcctcgccacggagaggtgcgcgtg
agcgaggaggccgtcgccggggtggtccggacgctgagcgaaccgcccgtccgccgccgg
gccgccgccgacgtctgccggaccctggccggcaccgaccgcgcgtccatcgcgattcct
ctggccgagctgctcttcgaccgcagcctcgatacggtcggagacgagcatccgacggag
gctgacgagcgcgaagagggcggagaagaaggcgaaggctggcaggtcctctgcgggccc
cgcctcgcggcgcacgcgcgtcgccgactacacgctttgctggcaaacacagacgagagc
ctcgacccggtccgaatagagcgctgggtgtccctctgcccgcctctgcttgcggccggc
gacttcgtcgagacggcgaagggcctgctcgccgtggacgtcgagaggtcgacgaggacg
gtggagggcttcgcccttcgcgccgactgcgtctccggccgcctgctctgtcccgtccgg
gacgaacgcgcccgaggtctctcggaaatcgtagaaagggaagagacggaggactgcaga
gaccccgactcgagggacgtggctccgttcgttcgggcgctcgtctttcgcgcgggtctt
ctgtgcgaaatgctgagaggccggagcgaggaagcggagccggcgccgaccggagagtgc
ttccgagaggcgttcgcggaagtcctgcacgacgcggccgtcctgcgctctctctgccag
ggatacgttcacgccccgttctacgaaagcgtgaaacgctgcaaggagcgggtggaagcc
gcgatcgacgaagcgacctcgctgcttcgggaggaggacgcgaaggaattggcgaagtcg
ttaactcagcgggccttcgacgccggctactactgggccttcgcccgcagactgtacctc
gaaaagacggggacgaagggaatcgacggggtccgggacgagccgggcggagacgcgggt
tcagacggggccgtcttagacccgcttctgctggacaaaatcgtgactcgcagcggcttt
ttccacgtgacacaggttcaaggcggagtccgaggacggtacttgtcggcgatccgaggc
tggtacttggcgcagggtttcgcctccgatctcgcggactcggagcgcaaggagctgttc
gttcgcaagctgacctccgcgttggcgtcggccggcctcgagcccctcatggacgactac
tacaagtactgcgacaagatgttcaacgacagagattactggaaagtgccatggagcgtc
gtgagctgcgagatcggcgtgctggatctgctacgcgaggcggtggaggccggcgcctgg
gacctggacgccgccacctgggacttcgccaacatcgcgctctgctcggcgctcgcctct
ctggccgggacgccccccgacctcttgcctcgcaccaaaatagccgcggcgggccgagcg
gccctcgggctcttcgcgagcgtggccggtttcgtggagagcgtccgagaggagagcgag
cgccgcctcccgagcgcccacgtggcgtcgctgcccgccgagtggcgggacatcttcgcc
ccggccgcccacaccgacgtctcgacgctgcaggctcgactcctcgagcgcgccgtcgcg
ccgggccggggccgaccgacggcggccgagacggcgctggcggacgcggtggcggcggcg
cttcccttcgtgcgctgggagctgacggcggcggcgcgacgagacgccgacctgtcgctg
gagaggctgaccggcaccgctctagaggcgctgtcgcgcgacgcgtcggcgcccgtccac
cgcttggcctacgccgcgctcgcgactctcgccaaaccgctcgtgctcgaagacgtggca
aagttgaaatcggcgagcgagcgagagagcgaggaagaggacgcgaagctctccctctcg
ctgcggccctacttgacggccctgaagcgtcgcgcgcccgatctgctgccggacgacggg
cgtcccgaggaggagcccccggccgagtggtgggacggcgcccgcgggtttctcctgacg
gcgctggccgccctgcgccacgccgatctcgccggacgtgatctcgtccaccactacgtc
gagtgtctcggggtcagcgagacgatcggggacgtcctctccgtggccgggcgggcgctg
ccggcggaggtcaagcgcgcctcgggccccgacggcggagcgctgccgccccgcgtcgcc
gactatttcaccaccgaccctcctctctcggccgagcccgacgagcggacggccgcgggc
cgcgtggcctgccgcgtcgtgttgtgcgcggcgcggagcgccggggcggccgtgagggcc
cactggagcgcgtcgaatccccggagcgccgaagcgtttcggcgcctcgtcgcgctcgcg
gtcgcgcagccgctgatcgaggagcagctgcggcgcctcaaggagcgggcgcgtgaggac
ctggaggacgtcgaggtgacggtgtcgcgagtcggcggccaggtcgaggtgcgcgctagg
gcgcgagtggaggagcgctgggtggagatgacggtgactctgggcgccgcgcacccgctg
gagccgccccgcgtagaggcgccgccgcagcgttcgccggcctcgcagttgcactgggtg
cgcgtgtacctggcttaccagaacggctggctcgtgacggcgctgcgcctgtggagcgaa
gcgctgcgctgccgcgtggatgccgcggcgcagtgctacatctgctactgccgcttgcac
ccgaccaccgcgcggctgcccaacgtgccctgccacacctgcaacaaccgcttccactcg
gcctgtctccgcaaatggttcaaaactagccagaagtccaactgtccactgtgtagaaca
gtattctag
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integrated database retrieval system
