KEGG   Pieris rapae (cabbage white): 111001904
Entry
111001904         CDS       T05162                                 
Name
(RefSeq) transcription elongation factor SPT4
  KO
K15171  transcription elongation factor SPT4
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111001904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prap03021]
    111001904
   03019 Messenger RNA biogenesis [BR:prap03019]
    111001904
Transcription machinery [BR:prap03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     111001904
  RNA polymerase I system
     111001904
Messenger RNA biogenesis [BR:prap03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     111001904
SSDB
Motif
Pfam: Spt4 zf-C4
Other DBs
NCBI-GeneID: 111001904
NCBI-ProteinID: XP_022127659
LinkDB
Position
14:complement(7756685..7757951)
AA seq 116 aa
MSLDTVPKDLRGLRACLVCSLVKTFDQFEYDGCDNCDEFLRMKNNKDNVYDCTSNNFDGM
IAAMSPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIVYRPRDTSQR
NT seq 351 nt   +upstreamnt  +downstreamnt
atgtccttagataccgtacccaaggatttaagaggcttgcgggcgtgtttagtgtgttca
ttagtaaagacttttgaccaatttgaatatgatggttgcgataactgtgacgaattcctt
cggatgaaaaataacaaagataatgtttacgattgtacaagtaataattttgacggaatg
attgctgctatgagtccagaagatagttgggtgtgtaaatggcaaagaataagccgcttc
tgcaagggagtctatgctatatcagtatcgggtcgtcttcctgctggtgtcataagagag
atgaaaagtcgtggcattgtgtatagacccagggatactagtcaacgttaa

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