KEGG   Pieris rapae (cabbage white): 111002094
Entry
111002094         CDS       T05162                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03020  RNA polymerase
prap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111002094
  09124 Replication and repair
   03420 Nucleotide excision repair
    111002094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prap03021]
    111002094
   03400 DNA repair and recombination proteins [BR:prap03400]
    111002094
Transcription machinery [BR:prap03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111002094
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111002094
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Zn_Ribbon_TF RIM2a_ZnF Zn_ribbon_IS1595 DUF7351 Zn_ribbon_GRF_2 HVO_0758 DZR TRASH_HVO_1752_C
Other DBs
NCBI-GeneID: 111002094
NCBI-ProteinID: XP_022127895
LinkDB
Position
2:complement(9829566..9830135)
AA seq 126 aa
MTLNLGRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNK
IMHEVDELTHINPDVVSDPTLPRTKDHMCPKCNHREAVFFQGQTRRAEEEMRLYYVCTSC
KHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atgacccttaacctaggaagaaaagatggagggcccggatatgttggtattcagttttgc
caagaatgtaataacatgctttacccgcgcgaagataaaaataataaagtattgctatat
gcctgtagaaattgtgactacaaacaattagccgattctaattgtgtatatgttaacaaa
attatgcacgaagttgacgaattaactcatataaatcctgatgtcgtgagtgatcccaca
ttgcccagaacaaaagatcacatgtgtccaaaatgtaatcatcgtgaagctgtgttcttc
caagggcaaacaaggcgagcagaagaagaaatgagactttattatgtctgtacaagttgc
aaacacagatggactgagtga

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