Pieris rapae (cabbage white): 111002372
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Entry
111002372 CDS
T05162
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04140
Autophagy - animal
prap04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111002372
04148 Efferocytosis
111002372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
111002372
Membrane trafficking [BR:
prap04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
111002372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
zf-RING_Vps41
WD40_Prp19
WD40
zf_RING_Vps8_fungal
WD40_WDHD1_1st
Beta-prop_HPS5
zf-RING_5
TPR_2
Beta-prop_CAF1B_HIR1
WDR55
zf_RING_Vps8
Gin
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_like
TPR_1
zf-C3HC4
Vps39_1
zf-RING_2
VPS8_N
Beta-prop_IP5PC_F
Polysacc_synt_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
111002372
NCBI-ProteinID:
XP_022128212
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Position
17:9778665..9781873
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AA seq
839 aa
AA seq
DB search
MTLNLESCDSLPPDEEPKLKYDRMGNDVQNILLKDAVSCISVHTKFICLGTQWGVIHLLD
HEGNTVPISPDHNHKDLQAHAIAVNKISVDQNGDYIASCSDDGKVLVYGLYTNENTHNLT
LGRVVKSVALDPNYFKSGSGRRFLTGDNKLTLYEKTFLNRLRSTVLCECEGYVQAISWHD
RFVAWASEVGVRVYDLVARCSLGLIQWEKALNRSIEDFRCNLLWSAHNTLMIGWVDTVRI
CIIRKRSLIELQTRDVTEYLVDPVYTFQSDYFISGLGPFNDQLVLLGVPKEPDSETGKTQ
RPVLSVADYKDCEFCEVSTDSLNIRGYEEYSCNDYYLDMLIEESRFFIVSPKDIVIASPY
DIDDRVNWLIDHGRYEKAITVLEEAGGRTSKHSVVTVGVQYLDHLLLEHLFEEAAILCAR
ICKNDKVLWENQILKFAEVNQLRTISAYIPRNPEQALSSHIYELIIYEYLKVDPVGLLKL
VQEWNPALYKTGVIIKEVLEHLLTTEVDKNIYLEALALLYCYQKKYDKALTAYLKIQHKN
VFKLITQYKMYSVIYDKILDLMNLDCDTAIPLLQSKEAKIPIEVVEEQLRNHDLYLFKYL
DSYSKVEPNGHYHGKLVKLYAKYAREKLLPFLKCSDNYPIQEALDICHDNEFYPEMVFLL
GRIGNTREALQIIIENLKDINQAINFCQEHNDRELWGDLIKQTVDKPDCVTLLLKRIGNY
VDPRILIQNIQQGCKIKDLKESLVKMMCDYHLQMSVQEACKVITLRNYFELHEKMIINQQ
RGISVTDDFLCSVCQRRIIMRDLSNASDLVVYNCRHSFHIECLPNGIREGCSVCSAVRM
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaaacttagaaagttgtgatagtttacctccggatgaggaaccaaaattgaaa
tatgatagaatgggtaatgatgtgcaaaatatactattaaaagatgcagtcagctgtata
agtgtacatactaagtttatatgccttggtacgcaatggggcgtcatccatttgcttgac
catgaaggaaatactgttccaatatcccctgatcacaaccacaaggacttacaggctcac
gctatcgcagtcaacaagatatccgttgatcaaaacggagactatattgctagctgctct
gatgatggcaaagttttagtctatggcctgtatacaaatgaaaatactcataacttgact
ctgggtcgagtagtgaagtcagttgcgttggatcccaactattttaaatcaggatcaggc
agaagatttctcacaggagataataaactaaccctatatgagaaaacatttttgaatcgt
ctacgtagtacagtcctttgtgaatgtgaaggatatgttcaagctatttcctggcatgac
cggtttgtggcttgggcaagtgaagttggtgttcgagtttatgacttagttgccagatgt
tcgttgggacttattcaatgggaaaaagccctaaacaggtcaatagaagattttcgatgt
aatttactctggtctgcccataacaccctaatgataggctgggttgatactgttaggata
tgtattattagaaaaaggagtctaattgaactacaaacacgagatgtcactgagtattta
gttgatcctgtatatacctttcaaagtgactatttcattagtggtttaggtccctttaat
gatcaacttgtcttgttgggagtgcccaaagagcctgactctgaaactggaaaaacacaa
agacctgtgttatctgttgctgattacaaagattgtgagttttgtgaagtctctaccgat
agtctgaatataaggggatatgaagaatactcatgtaatgattattatttggatatgctt
attgaggagagtcggttttttattgtgtcaccaaaagatatagttattgcaagcccttat
gatattgatgacagagtaaactggttaatagatcatggacgatatgaaaaagctatcaca
gtcttagaagaagcaggaggtagaacttccaaacattctgttgttactgtaggtgtgcag
tatttagaccacttgctgttggagcatttatttgaagaagcagcaatattatgtgctaga
atctgtaaaaacgacaaagttttatgggaaaatcaaattctaaaatttgctgaagttaat
caactgagaacaattagtgcttacataccacgaaatccagaacaagccttaagttcacac
atatatgaacttattatttatgaatatttgaaagtagatcctgtaggactgttgaaattg
gtacaagaatggaatcctgccctatacaaaacaggtgtgattataaaagaagttttagag
catttgttgacaactgaagtagataagaatatttacctagaagcattagctcttctatat
tgttatcaaaaaaaatatgacaaagctttgacggcatatttgaaaattcaacataaaaat
gtttttaaattaatcactcaatataaaatgtactctgttatatatgacaaaatcttagac
ctaatgaatcttgactgtgatactgctattcctctactccaatccaaagaagcaaaaatt
cctattgaagtggtggaggaacaactgagaaaccatgatttgtacctctttaaatacttg
gattcatatagcaaagtagagccaaatggccactatcatggaaagttggtgaaattgtat
gctaaatatgccagggaaaagttgttacctttcttgaaatgtagtgataattatccaatt
caggaggctttggatatatgccatgataatgaattctaccctgagatggtgttcttgctg
ggacgaattggaaacacaagagaagctttacagattattatagaaaatttaaaagatatc
aatcaagccataaacttttgccaggaacataatgacagagaattatggggtgatcttata
aaacaaacagttgataagccagattgtgtaactttactgctaaaaagaataggaaattat
gtagaccccaggattttaatacaaaatatacagcaaggatgcaaaataaaagaccttaaa
gaatcccttgttaaaatgatgtgtgactatcacttacagatgtctgtgcaagaggcatgc
aaagttataactttgagaaattattttgaattacatgaaaagatgataataaatcaacag
agaggaatatctgtcactgatgactttttgtgcagtgtttgccagagacgaataattatg
cgagatctatcaaatgcttctgacttagttgtttacaattgcaggcattcatttcatata
gaatgcctgccaaatggtattcgtgaaggatgcagtgtgtgtagtgctgtaagaatgtga
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