Pieris rapae (cabbage white): 111002663
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Entry
111002663 CDS
T05162
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04145
Phagosome
prap04512
ECM-receptor interaction
prap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111002663
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111002663
09142 Cell motility
04820 Cytoskeleton in muscle cells
111002663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
111002663
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prap04147
]
111002663
00536 Glycosaminoglycan binding proteins [BR:
prap00536
]
111002663
Membrane trafficking [BR:
prap04131
]
Endocytosis
Phagocytosis
Opsonins
111002663
Exosome [BR:
prap04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111002663
Exosomal proteins of colorectal cancer cells
111002663
Exosomal proteins of bladder cancer cells
111002663
Glycosaminoglycan binding proteins [BR:
prap00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111002663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
cEGF
Motif
Other DBs
NCBI-GeneID:
111002663
NCBI-ProteinID:
XP_022128531
LinkDB
All DBs
Position
3:498088..525264
Genome browser
AA seq
1206 aa
AA seq
DB search
MASRAIRALTLLSLLAVTTNALTLNEDATNDAIAAASAGEDREVAILLQGPHDRTARREE
LLHGKTTEESAFSLFYNSKSNKVSLESLHGGHLKSVSWGLGSHPRETLLLIVTHEKVKLY
VGCQPLHWHPMSGRHDILSLLANKKFKLYHEENAPVDIHGNEKAALYSLNCEVSPPSLVT
VDSDVEEVKDFIAREERLKREEMQGDDYRTNYIDPNILPMAQPTVPPRGDIPNMDIESCD
DEVIRQLKLLRETIELLRRELGDQKGTIDNLRNQMRICCSRPSPPVERCSGSSCHPGVQC
RNTASGIECGSCPSGMEGDGRRCRPLTCDRRPCSQTEFCVDSEQGFHCERCPGRQTSDGQ
TCRTPCSSNPCFGGRVQCQDTPVGGYRCGSCPAGFTGNGEQCVRITCRQISCFQGVECQE
TASGPRCGSCPAGYMGDGQRCQHVCDTRNPCGERRCIPKRSTPFYECEGCPKGYEWNGDR
CQHICETRRPCGERRCIPTSSSAFYECEGCPQGYEWNGDSQRCQSICDFRRPCGERRCTP
KTSNPFYECEGCPLGYEWNGYACIDMDECDLIRPCDEMVSCSNVDGGFICGPCPPGFDGS
SGWRGSGDDRRREHCVDIDECADGREPCPKGRLCVNTLGSFTCVPCGGHFYVNTSRPCID
VGDLVQRCDPARCRRFNAVCGYGQTCVCATGWAGNGTVCGPDRDIDGYPDHQLPCNEIHC
KADNCPDVSNSGQEDADKDGLGDSCDPDADGDGIPNIPDNCPLTPNPDQQDRDDDRSDKR
GDACDNCPRRFNPGQEDADRDGLGDVCDPDMDNDGILNENDNCPRVYNPQQEDMDGDYIG
DLCDNCPRVRNPQQDDADKDNVGDACDSDVDRDQDGIQDGLDNCPNLANSDQQDVDNDGK
GDACDDDIDGDGIPNLEDNCPLVHNPDQLDSNGDGIGNACDNDNDGDKVTNDLDNCPNNS
KIFRTDFRNYMTVRLDPEGTSQQDPNWEIANEGAEIIQTLNSDPGLAVGFENFGGVDFEG
TLFVDSQIDDDYVGFIFGYQNNKRFYVVMWKKYTQTYWQTTPFRAVAEPGIQLKLVNSKT
GPGKTLRNALWNTESTSDQVTLLWKDPRNVGWREKTAYRWRLLHRPKIGLIRLKIYENNR
LVADSGNVYDFTLKGGRLGVFCFSQEMIIWSNLVYRCNDKIPSNIVSELPTRLLKKLEVD
HDFIYT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcgggccattcgcgccctcacccttttatccttactggcagtgacgacaaat
gcgctaacattaaacgaagatgcaacgaacgacgccatagctgcagcatcagcaggcgaa
gatagagaagtggcaattctccttcaaggacctcacgacaggacagcgaggagagaggaa
ctattgcacggcaagactacagaagagagcgctttctcacttttctataacagcaagagt
aataaagtatctctggaaagtctgcacggaggtcacctcaagtcagtatcgtggggccta
ggatcacatccaagggagaccctacttctaattgtgactcacgagaaggtcaaactatac
gtaggatgtcaaccgttacactggcacccaatgtccggcagacacgatatcttgagtttg
ctagcgaataaaaagttcaaattgtaccacgaagaaaatgctcccgtagatatacacggg
aatgagaaagcggcactatactccctcaattgcgaagtcagccctcctagtcttgtaaca
gtagactcagatgtggaggaagtcaaagactttattgccagagaagagagacttaaaagg
gaagaaatgcaaggagatgattacagaacgaattatatagatccaaatattttgccgatg
gctcagcccacagttcctccgagaggagacatacctaatatggatattgaatcgtgtgat
gatgaagtgatccgtcaactgaagttattaagggagacgattgagttacttcgacgagaa
ctaggagaccagaaggggacgattgacaatctccgaaaccaaatgaggatttgctgcagt
cggccctcgcctcctgtcgagagatgttctggctcttcatgtcaccctggtgttcaatgt
cggaatactgcaagcggaatcgaatgtggctcgtgcccttcaggcatggaaggggatggc
aggagatgtaggccgctgacctgtgatagacgcccatgctcacaaacggagttctgcgtc
gattcggaacaaggcttccattgtgagcggtgtccaggaagacaaacaagtgacggacag
acttgccggacgccttgtagttccaacccatgcttcggagggcgtgtccagtgccaagat
acgccagttggaggataccgatgtggctcctgtcctgcaggattcacaggaaatggggaa
caatgtgtcaggatcacttgtagacagatatcgtgtttccaaggtgtggaatgtcaagag
acagcgtctggtcccaggtgtggttcctgtcctgctggttatatgggtgatggtcaaagg
tgccaacacgtctgtgacacgaggaacccttgtggggaacgacgatgcataccaaagcgt
tctacgccattttatgaatgtgaagggtgcccgaaggggtatgaatggaatggggacagg
tgccaacatatatgtgagactaggcgaccttgtggggaaaggcgctgtattcccacatct
tctagcgctttctatgaatgcgagggttgccctcaggggtatgaatggaatggcgacagt
caaagatgtcaaagcatttgcgacttcaggcgtccgtgcggagaaagaagatgcactcca
aagacgtcgaatcctttctacgagtgtgagggatgtccgctgggatatgagtggaatggt
tacgcttgcatagacatggatgagtgtgatctcattcgaccatgcgacgagatggtgtca
tgcagcaatgtcgacggtggcttcatttgtggaccctgtcccccagggttcgacggtagt
tccggatggagaggatctggagatgataggagaagggagcattgtgtggatatagatgag
tgcgctgatggaagggagccgtgtcctaaagggcggctttgtgttaatactttgggttca
tttacgtgtgtgccatgcgggggtcacttctacgtgaacacctcgcgaccatgcatcgac
gttggagatttggtacaacgctgtgacccggctagatgtcgtcggtttaacgcagtctgt
ggatatggccagacctgtgtttgtgcgactggctgggccggtaacggaacagtatgtggc
cccgatcgtgacatagatggatacccggatcaccagttgccctgcaatgaaatccactgc
aaggctgacaattgcccggatgtttccaattccgggcaagaagatgcggataaagatggg
cttggagactcgtgtgacccagatgctgatggtgatggaatacctaacattccagataac
tgtcctttaacacccaatccggatcaacaagaccgtgatgacgatcgcagtgataagaga
ggagatgcgtgtgataactgtccacgaagatttaacccaggacaagaagatgcagacagg
gatgggttgggagatgtgtgtgacccagatatggacaatgatggaattttgaatgaaaat
gacaactgcccccgagtatacaatccacagcaagaagacatggatggtgactatatcgga
gatctttgcgacaactgcccaagagtgaggaaccctcaacaagacgatgctgacaaagac
aatgttggagacgcgtgtgatagcgatgtcgatcgagaccaggatggtattcaagatggc
cttgacaattgtccaaacctggccaacagtgatcaacaggatgtcgacaatgatggcaag
ggtgacgcatgtgacgatgatattgatggagatggaattcctaacctggaagacaattgt
cctttagtgcacaatccggaccaactcgatagtaacggtgatggaattggaaacgcctgc
gataatgataacgatggtgacaaagttacaaacgacttagataattgcccgaacaattcc
aaaatattccgaactgattttcggaactacatgacagtccgcttggaccctgagggtacg
tctcagcaggacccaaactgggagatagctaacgaaggagcagaaattattcagacactc
aattcggaccctgggttggccgttggctttgaaaacttcggcggcgttgatttcgaagga
acattgttcgttgattcgcagattgatgacgattacgttgggtttatatttggatatcaa
aacaacaaacgcttctacgttgtaatgtggaagaagtacacgcagacgtattggcagacg
acgcccttccgagcggtcgccgaaccgggaatacaattgaaactcgtcaattcaaagacg
ggacccggaaaaactttgaggaatgctctctggaatacggaatctacttcggatcaagta
actctcctctggaaagatccgcgcaacgttggttggcgtgaaaagacagcgtacagatgg
cgattgcttcacagaccgaaaataggtctcatacgtctaaaaatatacgaaaataaccgt
ctcgtggctgattctggcaatgtttacgactttactctgaaaggaggaagattgggcgtg
ttctgtttctcgcaggagatgatcatctggtccaatctggtttataggtgcaatgataaa
ataccgtcgaacatagtgtccgagctaccaacgaggctactgaagaaactggaagtagac
catgatttcatttatacgtaa
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integrated database retrieval system
