Pieris rapae (cabbage white): 111002828
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Entry
111002828 CDS
T05162
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prap04040
]
111002828
Ion channels [BR:
prap04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111002828
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
111002828
NCBI-ProteinID:
XP_045485297
LinkDB
All DBs
Position
8:complement(4933132..5047749)
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AA seq
2280 aa
AA seq
DB search
MPYYGYREGSDSSGGCSESDGGESDSEGGISTESTVGQGLPFPGFTPVALRYLTQDTRPR
SWCLKLITNPWFERISMLVIFLNCVTLGMYQPCVDDQCVTNRCKILQVFDDIIFAFFTLE
LTIKMVAMGVYGHGTYLADSWNRLDFFIVFAGALEYALNVENINLSAIRTIRVLRPLRAI
NRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWEGILRQRCELVLPTNVLR
PNISFYYEFSKELDYICTTPADSGMHQCGNFPPYRYGPVVCNETARPFSYNTPTNNSCVN
WNQYYTNCTQRGSNPFQGTISFDNIGLAWVAIFLVISLEGWTDIMYYVQDAHSFWDWIYF
VLLIVIGSFFMINLCLVVIATQFSETKKREMERMRVERARFTSSSTLASSTNNSEPATCY
AEIVKYVAHLWRRFKRRMAKKIRVYRYQRAQLRWRTSRETLQLPANRPKQHHPRCPKLHP
QGNGKNTEDVEEPLSRPSLLRVPSLSAADLENTSNLSLLSPPSLARRRSSVMFSDTVLLH
APNAPHLAHPNNLCSSEKMTQTDSLSQRDWLKSQSEFDLPAETAEERAAVGGTMSCQELL
ALSGALSAALPTGQVALDSFFEELTKGISKRAGDEKSDTRIVEIEDFSCCADLIAADAAA
KETKKNRFTKACSRLWKRFNKFLSLLRKHIKAIVNHKYFQQGILLAILINTLSMGIEYHN
QPEELTVIVEISNVVFSAIFAVEMILKIISEGPFKYISNGFNVFDGVIVILSAFELTQSV
GHEQDLAGSSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAVFFSLLVLFIFI
FSILGMYLFGGKFCKFNEDNGTERDCTCPEIISNHPKCECDRKHFNNILWATVTVFQVLT
QEDWNVVLFNGMEKTSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERREREQRE
LAKSKLSSECFSDNNELQYNESNSGSNSSDSFSQNEIKNFWKSADDVRKAKDDPNNKEKV
MKSKKRKPKSATHNSTLCKDCAHSNKCNIQKESKLLASSSINEHSNSTVVPMITHTAATP
QDSPSTTLEPGASFKDFNVALSLERSSMLSSLDSIDRTSCTSIPGLLKPPNSYTLTLHSA
AAALGAEKARLPVSLAPPPLTLALPPSRATSPGTPTTPRSLPSPMIPEKNLQVTIAKEGN
CLNVSDKSSLLNSQRSLTITTPTPNGEDKCRVQRGYSWRLSRPSLRKKKQRTGSDSDAVI
LNNGRDHIACNGSSLRRNDILLSSSIVIKNDTQSEMPYRSRGQLPVRVLAPPARRVSAHA
TPILPDVSWKAPEAGFSSDSTVRLDGKAPPHRLSLTNDLLTVTTVSEVKASNLIPSGQQQ
LPPRALNEALPRTNNQPLPLIKQINEEVAINNVCIFSSRFDRSRFRFKDLFRFMEPTGCL
KEKEDYSLYIFSPGNWIRRFCTWMVTRSWFDNIVLLFIALNCITLAMERPNIPPDSKERA
FLSSANYVFTVVFAVEMFIKVVASGMFYGAEAYFTSGWNIMDGSLVIISIIDLLMSLVSE
SSPRIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGI
LGVQLFKGAFFYCEGANIKTVKNKSDCLAIEGNVWVNRKYNFDDLGKALMSLFVLSSRDG
WVNIMYTGLDAVGVDQQPIVNYSEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQ
EKEERVRRAAKRALQMEKKRRKMHQRPYYSDYSQTRLFVHNVVTSKYFDLAIAGVIGLNV
VTMAIEYYRMPPALQYALKIFNYFFTAVFILEAVMKLVALGFKIYLKDKWNQLDVIIVIL
SIVGIVLEELETNIIPINPTIMRVMRVLRIARVLKLLKMAKGIRALLDTVMQALPQVGNL
GLLFFLLFFIFAALGVELFGRLECSDEIPCQGLGEHAHFANFGMAFLTLFRVATGDNWNG
IMKDTLREDCDSTVDCVRNCCVSTIIAPIFFVVFVLMAQFVLVNVVVAVLMKHLEESHKQ
MEDEIDMDVELERELEREADDEEDRALCRALEECTAPPRPLNKVPSLPANFTYSEPKHQI
IPSPRRRKTLHSHHALLPVALPQRRASLSPHAFSRRRQESTTDAPALYEEDARFIDADDA
DELEPGSPPRRDSFAQNRRQRVDKRSSLRSEEARLLRPAPVLLAVPSTRQSLRDKTKRRP
STESATPSEVSRASFRSNAERSNPSITEEEKIRNVIAERRKIDPVRPEPDDIVELSERGS
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atgccttactacggctatcgggaggggtcggactctagtgggggttgttcagaatcggat
gggggtgaatcggactcggagggggggataagtaccgagagtacggtgggccaggggcta
ccctttcctggatttaccccggttgcccttcgatatctgacgcaggacaccaggccgagg
agttggtgtctgaagctgatcaccaatccatggttcgaaagaatttcaatgttggtgatc
tttcttaactgcgtgaccctcggtatgtaccagccctgcgtcgatgaccagtgtgtaaca
aatagatgtaaaatactacaggtttttgatgacataatatttgcctttttcacattggag
ttgactataaaaatggttgcaatgggtgtgtatggccacggcacttacctcgcggattca
tggaataggctggactttttcattgtttttgctggggcactggaatatgctttgaacgtg
gaaaatataaatctgtcggcgataagaactatcagggtacttcgaccgcttcgggctata
aacaggatacctagtatgcgtatcctggtgatgctcctcctcgacacactgcctatgttg
ggcaacgtactactcctgtgctttttcgtgttcttcatatttggtatagtcggtgtccaa
ctgtgggagggtatcctcaggcaaagatgtgaacttgttttaccaacaaacgtgcttcga
cccaacatttccttctactacgagttctcgaaggaactagattacatttgcacgacgccg
gcagacagcgggatgcatcaatgtggaaacttccccccatacagatacgggcctgttgtg
tgtaacgagacggcaagaccattctcttacaacactcccacaaataattcatgcgtgaac
tggaatcaatattacacaaactgtacccaacgaggatcgaatccattccaaggcacaatt
tccttcgacaacatcggtctcgcctgggtcgcaatatttttggtaatatctctggaaggt
tggacggatatcatgtattatgtacaggacgcacatagcttttgggattggatttatttt
gtgttgctgatagttattggatcatttttcatgatcaatctttgccttgtcgtaatcgcg
acacagttcagtgagacgaagaaacgtgaaatggaaagaatgcgagttgaacgagctcga
ttcacgtcgtcatctactttggcgtcgtctacaaataacagtgaaccagccacctgttat
gcagaaattgttaaatacgttgcccatttgtggagaagatttaaaagaagaatggcaaag
aagataagagtataccgatatcaacgagcccaactccgttggcgcacaagccgggaaact
ttgcagttgccagctaatcgaccgaaacaacaccacccgcgctgtcccaaactacatcca
cagggtaatggaaaaaatacggaggacgtagaggagccgctaagtagacccagcctgttg
cgcgttccctcgctctccgcagccgatcttgagaatacatccaatctctcgctactatcg
ccgccttcgctcgcccgacggcggtcttcagtgatgtttagcgacactgtactacttcat
gccccgaacgcaccccatttggctcaccccaataatctctgctcctcggagaaaatgaca
cagaccgattcattgagtcaacgtgactggctgaaaagccaaagtgaattcgacctgccg
gcagagacggccgaagagagagcagctgttggtggaactatgtcttgtcaggagcttctg
gcactctctggagctctatccgctgctcttcctacgggacaggtggctttggactccttc
tttgaagaactcaccaagggcatcagtaaacgagctggtgacgagaagtcagacacaagg
attgtggaaattgaagacttttcttgttgcgccgacctaatagcagcagacgccgcagcc
aaagaaacaaaaaagaatcgatttacaaaagcttgctcccgtctctggaaacgtttcaat
aaattcctatcgctactaaggaagcacattaaagcgattgtcaatcacaaatactttcag
cagggtatcctcctagccattcttataaatactttgtcgatgggaatagagtatcacaat
caaccagaagaactgacagtcatcgtggagatcagcaatgttgtgttttcagcaatattt
gctgttgaaatgattcttaaaataatatcagaaggtcctttcaaatacatttctaatggg
ttcaacgtgtttgacggtgtcatagtaatattgagtgcatttgagcttacacaaagtgtg
ggacatgagcaagacttagcaggaagttcaggtctatcagtgctgcgtacatttcgatta
cttagaatattgaaactagtccgttttatgccaaatttaagaagacaactcttcgtcatg
ctgagaacaatggataatgtcgctgtgtttttctcgttactagttctgtttatcttcata
ttcagtattctgggcatgtacttgttcggtggtaagttttgcaagttcaacgaagacaat
ggcaccgagagggattgtacttgccctgagatcatatcgaatcatcccaagtgtgaatgt
gacagaaaacattttaataacatcttatgggctacggtcactgtctttcaggtgttgacg
caagaagattggaacgttgttttatttaatggaatggaaaaaaccagccattgggccgcg
ttatactttgtcgcattgatgacattcggcaattatgtattgtttaacttacttgttgct
attttggtagaagggtttagttcagagcgaaatgaaagacgggagcgggaacaacgggaa
ttggcaaaatctaaattatccagcgaatgtttttccgacaacaatgaattacaatacaat
gaatcgaattccggatcgaactcgagtgacagtttttctcagaatgaaattaaaaacttc
tggaaatctgcggatgatgttcgaaaagccaaagatgacccgaataataaagaaaaagta
atgaaatctaaaaaaagaaaaccaaaatccgcaacgcataattcaacgttatgcaaagat
tgtgcccactccaacaaatgcaatatacaaaaggaatctaaattgctagcatcgagttca
attaacgaacacagcaacagcacagttgttcctatgatcactcacacagccgcgacacct
caagactcgccgtccactactctagagcctggagcatcattcaaagatttcaacgtagct
cttagcttggagagatcatcaatgttatccagtttggattcaatcgaccgaacttcctgt
accagtataccaggcttactaaagcctccaaacagttataccctaaccctccattccgcg
gcagccgctttaggtgctgaaaaggccagactccctgtctctttagcccctccacctctt
accctagcattaccaccatccagagctacttcccctggtacaccaacaacaccaaggtct
cttccttcaccgatgataccggagaagaacctccaagtcacaatagctaaagagggtaac
tgcctcaatgtgagcgataaatccagcttgctgaattctcaaagaagtcttaccataaca
acaccaaccccaaatggagaagacaaatgcagggtacagcgtggatacagttggaggttg
tcgaggccaagtttaagaaagaagaaacaaagaacgggctcagactctgacgctgtcata
ctgaataatggacgagatcacattgcttgcaatggttcaagtctacgaagaaatgacatt
ctgctttcatcgtctattgtcataaagaatgatacgcagtctgagatgccttatagatct
cgtggccagctcccagtgcgagttttggcaccaccagcaagaagagtttccgcccatgca
acacctatactacctgatgtatcctggaaagctccagaggcgggtttttcatcggattca
acagttcgattagatggcaaagcacctccccacagactgtctttaacaaatgaccttttg
acagtgacaacagtgtcggaggtgaaagcgagtaatttaataccaagcggtcaacagcaa
ttaccgccccgagcccttaacgaagcattgcccagaacaaataaccaacctttgccatta
attaaacaaattaatgaagaggtggcgataaacaatgtctgtatattctcatcgagattt
gaccggagcagatttagatttaaggatctttttcgctttatggagccgacagggtgtctt
aaagaaaaagaggattattctctttacatattttctccgggtaattggataagaagattt
tgcacatggatggtaacccgaagttggtttgacaatatagtgctactattcattgccctt
aattgcatcacacttgccatggagcgaccgaacataccaccagactctaaggagcgagct
tttttatcaagtgctaattatgtattcacagtggtctttgccgtcgaaatgttcataaag
gttgtggcatctggaatgttttacggtgctgaggcatacttcacctcggggtggaatatt
atggatggctcattagtcatcatatctattatcgatttactaatgtctctagtatcagaa
tcgagcccaaggatattcggaatattacgagtgttcaggttgttaagatccttacgacct
ttgagagtgatcaatcgagctcccggattaaaactggttgttcaaacgttattatcatca
ttacgacctatcggaaatatcgtgttaatatgttgcactttcttcataatatttggcatt
ctgggagttcagctgttcaaaggggcgttcttctattgtgaaggcgccaacattaagact
gtgaagaacaaatccgattgtctggcaatagaggggaacgtgtgggtgaacaggaaatac
aatttcgatgatctcgggaaggctttgatgtccttgttcgttctcagctcaagggatggt
tgggtcaatatcatgtatacgggccttgatgcggtcggcgttgatcaacagccaatagtg
aactactcagaatggcgtctcctctacttcattgcttttatcctactggtgggattcttt
gttctgaacatgtttgtgggagttgtggttgagaacttccatcgatgtcgagaagaacaa
gagaaggaggaaagagtgagaagagcagcgaaaagagcgttacaaatggagaaaaagaga
cgaaaaatgcatcaaagaccgtattattccgactattcacaaacacgcctgtttgtgcac
aatgttgttacatcgaaatactttgatttagccattgccggtgtcattggtctgaacgtt
gtcactatggcaatagaatattaccgaatgccacccgcactgcagtacgctttgaaaatc
ttcaactatttcttcactgccgtattcattctcgaagctgtgatgaaacttgttgcactc
ggctttaaaatttacctcaaagacaaatggaaccaactggacgtaatcatcgtaatacta
tccatcgttggtattgttttagaagagctagagaccaatataatacccataaacccaact
attatgagagttatgcgtgttcttcggattgcaagagtgttgaagctattgaagatggca
aaagggatacgagcattgctggatacagtaatgcaagctcttcctcaagttgggaatttg
ggattgctattttttctactctttttcatttttgcggctctaggcgtggagctgtttggt
cgtttggaatgttcagatgaaattccctgccaaggtctcggtgaacatgcccactttgct
aatttcggaatggcatttctaacgttattccgggtggcgaccggcgataattggaacggt
ataatgaaagacacactgagagaagactgcgacagtactgtagactgtgtgcgaaattgt
tgcgtctctactattatcgcaccgatattttttgttgtttttgtattgatggcccaattt
gtcctcgtcaacgttgttgtggctgtacttatgaaacacctagaagaatcccacaaacaa
atggaagacgaaatcgatatggacgttgaactcgagcgtgaactggaaagagaagcagat
gatgaagaagacagagctctttgcagagccctcgaagaatgtacagctccccctcggcct
ttaaataaggtaccttctttgcccgctaattttacatacagcgaaccaaaacatcagatc
ataccatctccacgccgccgaaaaacattacattctcatcacgctttattgccagttgct
cttccacaaagaagagcctcactatctcctcatgcctttagcagacggcgacaggaatcg
acaacagatgctcctgctttatatgaagaagatgcgcgattcatagatgcagacgatgcg
gatgaattagagccaggaagcccaccaagacgagactctttcgcccaaaatcgtagacag
cgtgttgataagagaagttcacttcggagcgaggaagccagattgcttcgtccagctcca
gtgttacttgcagttccttcgaccagacagagcctaagagataaaacaaagcgtaggcct
tccacagaatctgctacgccaagtgaagtgagccgcgcttcatttcggtcaaacgcagaa
aggtccaatccttctataacagaagaggaaaaaattagaaacgtcatagcggaaagaaga
aagatagaccccgtgcgaccggaacctgatgacatagtggagttgtcagagcgtggttcc
tag
DBGET
integrated database retrieval system
