Pieris rapae (cabbage white): 111002945
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Entry
111002945 CDS
T05162
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prap03009
]
111002945
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111002945
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
Helicases
111002945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
AAA_22
Motif
Other DBs
NCBI-GeneID:
111002945
NCBI-ProteinID:
XP_022128941
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All DBs
Position
3:complement(3681509..3684869)
Genome browser
AA seq
599 aa
AA seq
DB search
MVNKAWNKVTPPLSIPVLNCITKQGFNAMTPIQAAVIPLLLSCKDVVAEAVTGSGKTLAF
VVPMLEMLMKKERESPLRKKLVYSIIISPTRELATQIYEVIKQFLMEPELCHFSLCCLVG
GRPVESDIENIEKGAQIVVCTPGRLQDLLAERKNLNLPGRVREMEVLILDEADRLLDLGF
NATLTTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVLISVKEKSSISTPIALQNYY
IIVEPQDKFLFLLNFIRNRQMMKGLFFLPTCACVDYWADVLPVFLPDLKIFAIHGKMKQK
RGRILDKFREAESTILLCTDLMARGLDIPEVEWVLQWEPPTNPAALVHRVGRTARGGAAG
CSLLPLLPTEDTYVPFIKSNQKVELQDWKQSSDQIKISDKLRHKVLTILHDQQRKDRTIL
DKGMRAFVSHIRAYSKHECNILLQLKELPLGHIATSYGLLKLPLMPEIREEHKTQFIGPK
YEIDFNSISYRDKQKETSRLQKLQEYKKTGIWPSKKKKKMVKTEAWEHTKQIKQEKKEKR
TQRKETKKKMIAEGKNTKKRKTVTQEELQELAADVALLKKLKKRKISDDQFDKAFNVDK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggttaacaaagcttggaacaaggttactccccctttatcaatccctgtattaaattgc
atcactaaacaaggctttaatgccatgactcctatacaagcagccgtgattcctctcctt
ctgtcttgtaaggatgttgtggctgaggctgtaactggttcaggaaaaaccttagctttt
gttgtacctatgctagaaatgttgatgaagaaagaacgagagagtccactaagaaaaaaa
ttagtttactcaataattatttcgccaacaagggaattagctactcagatttatgaagtt
attaaacaatttcttatggaacctgagctctgccatttttctttatgctgtctggtgggt
ggacgtcctgttgaatctgacatagaaaatattgaaaagggagctcaaattgtagtttgt
actccaggaaggttgcaggacttgttagctgaacgtaaaaatcttaatttgccaggacga
gttagggagatggaggttcttatattagatgaggcagatcgtcttttggacctaggtttc
aatgccacattaacaacaattttgcagtaccttccaagacaaagacgtaccgggttattc
tcagcaactcagactaaggagctccaagatctagtaagagctggtcttaggaaccctgta
ttgattagtgttaaagaaaaatcaagcataagcacacctattgctcttcaaaattactac
ataattgtagaacctcaagataaatttcttttcctcttgaatttcattagaaatcgacaa
atgatgaaaggccttttttttcttccaacctgtgcttgtgtagattattgggctgatgta
ttaccggtgtttttgccagacttaaaaatatttgcaatacatggtaaaatgaaacagaaa
agaggaaggattctggataagtttagagaagctgaaagtacgatattactatgcacagac
ttaatggcaagaggcttagacataccagaagtagaatgggtgctccaatgggagcctcca
acaaatccagcggcattagtacatcgagtgggaaggacagctcgaggaggggcggctgga
tgttctcttttacctctcttacccactgaagatacatatgttccatttataaagagtaat
caaaaggtagaacttcaggattggaagcagtccagcgatcagatcaagattagtgataag
ttaaggcataaggtgttaacaatactccatgatcaacagaggaaggatcggactattctt
gataaagggatgagagcttttgtctcacatattagagcttactcaaaacatgagtgtaat
attcttttgcaactcaaagaattacctttaggtcatatagcaaccagttatggtctcctt
aagttaccattaatgcctgaaataagagaagaacataaaacacaatttataggtcctaaa
tatgagattgacttcaatagtatatcttacagggataagcagaaagaaactagtcggctg
caaaagttgcaagaatataaaaaaactggaatctggccctcaaaaaagaagaagaagatg
gtgaaaacagaagcctgggaacacactaaacaaattaagcaagagaagaaagagaagcgt
acgcaacgaaaagaaacaaaaaagaagatgatagcagaaggaaagaatactaagaagaga
aagactgtcactcaagaggagctacaggaacttgcagctgatgtagccttattaaagaaa
ttgaagaaacgaaagattagtgatgatcagtttgataaggcattcaatgttgacaaataa
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