Pieris rapae (cabbage white): 111002965
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Entry
111002965 CDS
T05162
Name
(RefSeq) E3 ubiquitin-protein ligase hyd isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111002965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prap04121
]
111002965
Enzymes [BR:
prap01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111002965
Ubiquitin system [BR:
prap04121
]
Ubiquitin ligases (E3)
HECT type E3
111002965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
111002965
NCBI-ProteinID:
XP_045489436
LinkDB
All DBs
Position
23:3695112..3749533
Genome browser
AA seq
2839 aa
AA seq
DB search
MSSMHFVVHPLPGTEDQLIDRLREVTERWNRFGTGGGSPALSSLRGVRSVAAGPAHIACL
LEDGTICRAAFSIIPDRLDLSKADASKNNGNGGGGSGGGGNSGGKQGGSSSSCGSRQQPR
TRARIMRNSIRAAPSSQGSTSRATGVIIGASGSSRVVSAVPAPFVPEDLVTQAQVVLQGK
SRSLIIRELQRTNLDVNLAVNNLLSRDDEEGEEPENGEGGDGYVPEDLISLLDGGFHASQ
QDQSVIIDADAMFSEDIFGYAAIRSYINSRSGGGSAGRAGASREGSSAQDRTSEFSRWRE
RQYFGPRRWLETALRDNSWDKEGVESKKKDSAMAASPLWVSEDLEYWDTNIRFTHIAATY
SELIAVSTYGQIHQWRWADPHPYQRTDALGNGSYHPRSNWLGLAPGERVININAAGIRIS
ILTDATRIATFLDESIAHAPGATRLEHPLQAFTEFGSDKPISLHVCSLYTVAKLDSGALY
WWGVLPLGQRARLWEKHRARSRKQQRGHSSSAPQDLQAGQSVTMKNAPMYQPGAIGFNMS
TGVPKVGILQNAAWNLSDTCRFKLLPAPQPDRSISEKDKRDMQNQSPLTVSSVKASSSST
SNKDTPKDSNKDMADRLDMPPPPSPASSTCSDTSTSHKRAKRVTVRGEEGSSNDGTKRDE
EEWPLKEVVFLEDVKSVPLGRVLKVDGAYAAVRFPSVGKDGKEIVPTPDDWTTLLQDCRL
VRKDDLVAVKWGTGGAAGPRGPDCLQRMPRKISLPPELQVITIAVDNRGVHAVVRRPGGA
LAYAVYAVGTTRALTDSVFPTDHTALLGHSNGHSIQLTTAAEGSEPVVMMLDGNNALYPI
ARDCVGMVREPPPLNLAPARAITAHALPLHPHGAAHSSHAPLKSQVALIIIVPEPQLMMP
RVLRCDLDGLRQLLHQLETDNNKQQILSILQERCDGNRNILHACVHMCSPTSNKEPDIVD
NPSVPTIPNPSSATNNEEAVPALSWPPETFEASGDEDSLMGISNNKMSNSGNGAVSADPV
ERRGNALSALRALCESTALQPYLLQLLTAKDGMGQTPLMAAVAERAYRAALVILDAIRAC
DADETQRSAAIFPPNAHPDHSPLLVLCCNDTCSFTWTGQDHINQDIFECKTCGLTGSLCC
CTECAKVCHKGHDCKLKRTSPTAYCDCWEKCRCKALVGGSWTARCDLLARLARETQLATH
FNSRGESILLFLVQTVGRQAVEQRQFRAGSGRARAPRKQPGSDAELDVPDHDLEPPRFAR
RALVHLLGDWSAVEAAVMCGSSTNEEASASHQQSGTTLLDKFTHALIVKCTNEMLDTLLH
TLIREQKNDTIPGRKERAREVTRRFVRSVARIFVIFSVEMAPGASKKKGPVSITSSLVRC
RRVFAALVVLAVEELVEAADALLAPVRLGVVRPTAPFPLATTYVDLVNGSEDLFGVEPLS
TGHPRSSRRESANNSNRATATGGTSIGSSTLVRSSTPVATEYADDVAGEALGGDDDASET
DEPTAPTQQQDVQHDDPMGDRGAEHVVVENGTERAEGGESESELDMLAEVETESDSDDQD
NAESAQRSVQTGATQGSDAALYDAGIASLLLYPEEESGDSTQPEDEDSEAGETDEQEGES
EPQLHDGETLERRAAPPTRTNLAPHSMQWAIRSREALRGGSSGTSGVRLTGASSLVFIDP
ASLRRSAGVAAAGAHDPHSTSTTAAFLARAFGIVIRQIADLLWEYERAPLPLTRMLPFAY
TDALRLQCYLERQLKPTWDWLVTVMDATEAQLRFGASLTSNNASTSTAEPSRAAAPTTRR
ATTFTTPATRIIGFSEAPRVRERDQGVEAGSARREFLAYCLSLLRAHSAEHAEQLPVMDV
AALKHVAYVLDALVYYMRAAQPQPHHHHHLWTPDENENEEGEEEMVVGGSTAAESDGEGE
NGRGRQHSFFQRTDSTLCLGCPPPDPFNMTMQDALPLADQPQLLQPNARREELFGMPRQP
VTVPPSGDGPPGTNNPLEVVPRRLGLSSRGPERGASPPARPASAPPAHTHTHILSRDEPQ
DLSCAKDTATKMDMDTDGEYISDSDSNEARQITRKKHHRHPHMSSNNQMHDSNSSSSEFH
TLVNTACSIMEGPHQQGLSISPSPGPSGLNTAQEPRASSSRSPGKSVIVRASRERQGELL
SVADPLESQEISAHVTVETTGLPPPPPLPQPNAPAQPRACPSLGASVSHDLLLGRWRLSL
DLFGRVFTEDVGLEPGSVVSELGGFPVKEVKFRRDMEKLRTSAQKDLTLHKMERERTKLL
QQTFAELNSAFAGQNRRALGALPQLTVNRVKVTFRDEPGEGSGVARSFYTSVAEALLANE
KLPPFEPKTGNVTNNSAANGTSGSAGGATSGASTNSGARSSSGASRARTKDTARRGAARP
ASRPSSREPRRVLSVDARPYSPQGAPAGESAGYSGERSSGHNEHLTVHQAQLGERLYPKV
HSLHPTFAGKITGMLLELTPAQLLVLLASEDALRQKVREAMDLIVMHPSEAILDLDVFSL
SERGGGAALNPTTALSAPDDAAPLFYSPGKRGYYSPRQGRATPERINAFRNVGRIIGLCL
LQNELCPMFLNRHVLKYILGRKIRFHDLAFFDPVVYESLRQLVVDAETGDSHTLFAALDL
NFSLEMCEEEGGGCVELLPGGREIEVTALNVYDYVRKYAQHRMVISQEKALEAMRVGVLD
VLPESALEGLTAEDLRLLLNGVGDINVAALVSYTGFNDESGEPPERLARFKRWLWAIVDK
MTHLERQDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSR
HVLKHKLLLAIKTKNFGFV
NT seq
8520 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatgcatttcgttgttcatcccttacctgggacagaggatcaactaatagat
cgtttgcgagaagttactgagagatggaatagatttggaactgggggcggatcacccgca
ctgagttccttgcgaggagtgcgttccgttgctgctggaccggctcatattgcctgcctt
ctcgaggatgggacaatatgcagagctgcattttcaatcatacctgacagattggatttg
agtaaagcagatgcaagcaaaaataatggaaatggtggtggtggaagtggaggtggtggt
aatagtggagggaaacagggcggaagcagcagtagctgtggttccagacaacaacctcgc
actagagcaagaattatgaggaactctattagagctgcaccaagctctcaaggatctaca
agtcgtgcaaccggggtcattataggcgcatcgggttctagccgtgttgtgtcagcagtg
cctgccccctttgtacccgaagacctcgtaacacaggcccaagtggtcctgcaaggaaag
agtagaagcctcataattcgtgaattacagagaacaaatctggacgtgaatctggcggtg
aacaacctgctgtcccgtgatgacgaagaaggtgaggagccggagaacggcgagggcggc
gacggctacgtgcccgaggacctgatctccctcctcgatggcggtttccacgccagtcag
caggaccagtcggtgatcatcgatgctgatgcgatgttctctgaggacatcttcgggtac
gcggctatcagaagttatattaacagccgcagtgggggcggcagcgctggaagggctggc
gcttcccgggaaggaagttctgcccaggatagaacctcggagtttagccgttggagggag
aggcagtactttggacctcgccgttggcttgagaccgccttacgcgataattcctgggat
aaggaaggagttgaaagtaagaagaaagattcagcaatggcagcgtctcccctttgggta
tccgaagatctggagtactgggacactaatatacgttttacccatattgctgccacctat
agtgaattgattgctgtctctacatatggacaaatacaccaatggcgctgggctgatcca
cacccgtaccagagaactgacgctctgggtaatgggtcgtaccatcctcgcagtaactgg
cttggattagcaccaggcgagagagtcatcaacattaatgcggccggtatcaggatctcg
attttgacggatgctacacgtattgctacgtttttggacgagtctattgctcacgccccc
ggcgctactcgcttagaacatccgctgcaagcgttcaccgagtttggctcggacaagccg
atttcgcttcacgtatgctccttatatacagtggcgaaactggattcgggagccctctat
tggtggggcgtattacctttgggtcaacgggctcgcctatgggagaagcaccgtgcacgt
tctcgtaagcagcagcgaggacactcctcatcagcgccacaggacttgcaggccggccaa
agtgttactatgaagaatgctcctatgtatcagccgggtgctattggattcaacatgtca
actggagttccaaaagttggtatactccaaaatgcggcctggaacttgtcagatacgtgt
cggttcaaacttctgccggcgccgcaacccgatcggtccatttctgaaaaggataagaga
gatatgcagaatcaatctccattaacggtgtcgtctgtgaaggcgtcatcatcgagcacc
tcaaacaaagacacaccgaaggacagcaacaaggatatggctgatcgcttggacatgcct
ccgcctcccagtcctgcttcatcgacctgcagtgatactagtacatcccacaagcgggca
aagcgcgtcacggtccgcggcgaggaaggttcatccaacgatggaacgaaacgcgatgaa
gaggaatggcccctgaaagaagtggtgttccttgaagacgtgaaaagcgttccgctcgga
cgggttttgaaggtcgacggcgcgtacgcggccgttagattcccatcggtgggcaaagat
ggaaaggaaattgttccaacgcccgatgattggacgacgctgctgcaggactgtcgttta
gtaaggaaagatgacttggtggctgtgaagtggggaactggtggcgctgccggtccacga
ggcccggactgtcttcagcgtatgccaagaaagatctcgttacctcccgaattgcaagtt
attactatcgcggtggacaatcgtggcgtacacgccgttgtacgcagaccaggcggtgcg
ttagcgtacgcggtgtacgctgtgggaacgacgcgagcgctcacagacagcgtattcccg
acggaccacacagctctattgggacactcaaatggtcattctatacagctcactaccgcg
gcagaaggcagcgaaccagtagtaatgatgctggatggcaacaacgccctttaccccata
gcacgtgactgtgtgggaatggttcgtgaaccgccgccgttgaaccttgcgcccgctcga
gcgatcactgcgcacgcgttgcccctgcatcctcacggcgcagctcattcctctcatgcg
ccgcttaagtcccaggttgcactaataataatagtacctgagccacaactgatgatgccg
cgggttctgcggtgtgatcttgatggacttcggcagttgttgcatcaactcgaaactgat
aataataagcaacaaatattatcaattcttcaagagcgttgtgatggtaatagaaatatt
ttgcatgcgtgcgtacatatgtgttcgcctacgtccaacaaggagcctgatatagtagac
aatccatcagtgcctacaattccgaacccctcaagcgcaactaacaatgaagaagctgtt
cccgctttgtcctggcctccagagacctttgaagcgtccggtgatgaagatagcttaatg
ggaatctccaataacaaaatgtcgaacagcggtaacggggctgtgagcgcggatccagtc
gagaggcgtggcaacgcgctctccgctttgagggccctatgcgagagtaccgccttgcaa
ccttatctattgcaacttctaactgccaaggatggcatgggtcaaacacctctaatggcg
gccgtagcggaacgagcgtatcgagcggctttagtcatattggacgcaatacgtgcgtgt
gacgcggacgaaactcaacggtcggcggccattttccccccaaacgcccatccagatcat
tcgccattgttggttctgtgctgcaatgatacatgcagcttcacatggaccggacaggat
cacattaatcaggacattttcgaatgcaaaacatgtggtctcaccgggtcactgtgttgc
tgtactgaatgtgctaaggtgtgccacaagggacatgactgtaaactgaaacgtacgtct
ccgactgcgtactgcgattgttgggagaagtgtcgctgcaaggcgttggttggcggcagt
tggaccgcgcgttgcgatctacttgccagactcgccagggagacacaattggctacacac
tttaattctagaggtgaatcgatccttctgttcctggtacaaacggtgggtcgtcaagcc
gtggaacagcgtcagttccgcgctggaagtggccgggcccgtgcgccacggaaacagccg
ggctctgatgctgagctggatgtgccggaccatgacttggagccaccgagattcgctaga
agggcattggtacatttgttgggcgattggtctgcggtggaagcggctgttatgtgcggc
tccagtacaaacgaagaggcgtcggcttctcaccagcagtctggtactacgctattggac
aagttcactcatgcgcttatagtcaagtgcacaaatgagatgttggatacgctcctacac
acattgataagagagcagaagaatgacacgataccgggacgtaaagaacgcgctcgtgaa
gttacgcgacggttcgtacgttcggtcgcgaggatatttgttatattcagtgtggaaatg
gctccaggggcttcgaagaaaaaggggccagtctcaataacctcgtctctggtgcgttgt
cggcgcgtcttcgccgctctagtagtgttagccgttgaggagctggttgaagcggccgac
gctctattggccccagtgcgacttggggtcgtccgtcccacggccccattcccattggcc
actacgtatgtggatttggtcaacggtagcgaagatttgtttggtgtggagccactgtcg
actggacatccgcggtcttcgcgaagagaatcagcaaacaacagcaaccgtgcgacagca
acgggcggtacgtccatcggcagttcgacgctcgtacgctcgtctacgcccgtagcgacg
gaatacgcggacgacgtggcgggtgaagcgttggggggagatgatgatgcgtcagaaact
gatgaaccaacggcgccaactcagcagcaagatgtacagcatgatgatccaatgggtgac
aggggagctgaacatgtggtggtcgaaaatggaacagaaagagccgagggtggggagagt
gagagtgaactggatatgctcgctgaggtggagaccgagagtgattcagatgatcaagat
aatgcagaatcggcccaacgcagcgtacagactggcgccacgcaaggttcggatgccgcg
ttatacgacgcaggaatagcgtcgctgttattatatccagaggaggaaagtggggactcc
acgcagccagaagacgaagactcggaggctggggaaactgacgagcaggagggagagtca
gaacctcagctccacgatggggagaccctggagagaagggcggcaccgccgactaggact
aatctggcgccgcactctatgcagtgggctatacggtctcgcgaagctctccgcggcgga
agtagtggaaccagcggagtgaggctgacgggtgcctcttctctggtcttcatagacccg
gcgtctttgcgccgttctgctggagtggcagctgccggagctcacgacccccattccact
tctaccacggccgctttcctggcgagggcttttggtatcgttattcgacaaatcgcggat
cttctgtgggaatacgagcgcgctccattgccgctgacgcgtatgctacccttcgcctat
acggatgcattgcgtcttcagtgttacttggagagacaattgaagcccacctgggactgg
cttgtcacggttatggacgccactgaggctcaacttagatttggggcatcgttaacttcg
aacaatgcaagtacatccacagcggagccaagtagagccgcggctccaaccactcgtagg
gcgactactttcacgacaccagccacaagaattattggattttctgaagcgccacgagtt
agggaacgtgaccaaggcgtggaagccggtagcgcaagacgcgagtttctcgcatactgt
ttgtccctcctacgtgcacatagcgctgagcacgctgaacaactgcccgtaatggatgtg
gccgccctcaagcacgtcgcgtacgtactcgacgccctcgtctattacatgagggctgca
cagccgcagccgcatcatcatcaccatttgtggacaccggatgaaaatgaaaacgaggag
ggcgaagaagaaatggtagtaggtggcagcactgctgcagaatctgacggtgagggggag
aatggaagaggaaggcaacactcgttcttccagaggactgattccacgctttgccttggt
tgtccgccaccagatccatttaacatgacaatgcaagacgccctgccgttggctgatcag
ccccaactattgcaacccaacgctaggcgcgaagaactctttggaatgccgcgacaaccc
gtcactgtgccgccttctggcgatggaccaccggggacaaataacccacttgaagttgtg
cctcgtcgcctagggctgtcaagccgtggcccagaacgtggggcttcgcctccagcccga
cccgcgtcggcccctcctgcgcacacacatacacacatactgtccagagacgaaccacag
gatctatcgtgtgccaaagatacagcgacaaaaatggatatggatacagacggggaatat
atatcggattctgactcgaatgaagcgagacaaattacaaggaaaaaacatcataggcac
ccacacatgtccagtaacaatcaaatgcacgactcgaactcgtccagctcagagttccat
acgctggtgaatacggcttgctccatcatggaaggaccgcatcagcaggggcttagcatt
tcaccatcaccaggtccaagtggtctcaacacagcgcaggaaccgcgcgcctcatcatca
agaagtcccggaaaatccgttattgtacgtgctagtcgcgaacgtcaaggggaattgttg
agtgtggccgacccgctggaatcgcaagagatctctgcgcacgtgacagttgaaactacc
ggcttgccccctccgcccccattgccgcagcccaatgccccagcgcagccgcgcgcgtgt
ccatcgctcggtgcgtctgtatcgcacgacctgttattgggtagatggcgtctatcgctt
gacctattcggacgtgtgttcactgaagatgtgggattggagccggggtccgtggtatct
gaactcggcggattccccgtcaaagaggtgaagttccgaagagatatggagaagctgagg
acatcagcgcagaaggatttgacactgcataagatggaacgggaacgtacgaaattactt
caacaaacgtttgcggaactaaatagtgcgttcgcgggacagaatcgtagggccctcggc
gctcttccgcaactcacggttaatagagtcaaggtcacgtttagagatgaacctggagaa
ggcagtggtgttgccaggtctttctataccagtgtagctgaggctcttctagcaaatgag
aagctacccccatttgagcccaaaacaggcaacgtaaccaacaatagtgctgcgaatgga
acatctggttccgctggtggcgcgactagtggggctagcactaatagtggagctcgtagt
agtagtggtgcaagtcgcgcccggacgaaagacacagccaggcgtggagcagccagaccg
gcttccaggccttcgtcacgcgaaccaaggagggtgctcagcgttgatgcacggccttat
tcgccacagggcgctcccgcgggtgagagtgcgggctacagcggcgaacgatcgagcgga
cacaacgaacacctcaccgtacaccaagctcaattaggcgaaagactgtatccaaaggtt
cactccctacacccaacgtttgcgggcaagattaccgggatgctgttagagctgacacct
gctcagttgctcgtgttgctcgcaagtgaagacgcgctcaggcaaaaggttcgggaggcc
atggatctcatcgttatgcacccatcagaggcgatacttgatctggatgtattctctcta
tcggagcgtggcgggggcgcagcccttaaccccacgacagccctctcggccccggacgac
gccgcaccgctgttctactcccctggcaagagagggtattattccccacgccagggtaga
gctactccagagaggattaacgcttttagaaatgttggaagaataataggcctgtgcctc
ctgcaaaacgagctatgtccaatgttcctgaaccgtcacgtactgaaatatatcctgggt
aggaagatacgcttccatgatctggccttcttcgatccagtggtgtacgagagtttgagg
caactcgtagttgacgcggaaaccggcgactctcatacgctttttgcggcgcttgatctc
aattttagtcttgaaatgtgcgaagaagaaggcggtggctgcgtagagttattgcccggc
ggacgagagatcgaagtaaccgcgttgaacgtatacgactacgtgcgcaagtacgcgcaa
catcgcatggtcatatctcaggagaaggctttagaggctatgcgagtgggagtcctggac
gtgctgcccgaatcggccctagaaggcctaaccgcggaggacctgaggcttctactgaac
ggcgttggcgacatcaatgtggcagcgctcgtgtcgtacacgggcttcaatgacgagagc
ggggaacccccggaacgactcgccagattcaaacgttggctctgggctatagttgataag
atgacgcatttggaaaggcaggatttggtatacttttggaccggatcgccagctttgcca
gcatcagaggaaggcttccagccgatgccttcagtgacaatcagaccagccgacgacgcc
cacctgccgacggccaacacctgcatctcccgactctacatacctctgtactcctcgcgg
cacgttctcaaacataaactattactcgcaattaaaactaaaaactttggcttcgtctag
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integrated database retrieval system
