KEGG   Pieris rapae (cabbage white): 111002980
Entry
111002980         CDS       T05162                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03030  DNA replication
prap03410  Base excision repair
prap03420  Nucleotide excision repair
prap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111002980
   03410 Base excision repair
    111002980
   03420 Nucleotide excision repair
    111002980
   03430 Mismatch repair
    111002980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prap03032]
    111002980
   03036 Chromosome and associated proteins [BR:prap03036]
    111002980
   03400 DNA repair and recombination proteins [BR:prap03400]
    111002980
DNA replication proteins [BR:prap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111002980
  DNA Replication Termination Factors
   ELG1-RFC complex
    111002980
Chromosome and associated proteins [BR:prap03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111002980
DNA repair and recombination proteins [BR:prap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111002980
  Check point factors
   HRAD17(Rad24)-RFC complex
    111002980
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RuvB_N Rad17 Viral_helicase1 AAA_24 AAA_19 Mg_chelatase RCF1-5-like_lid AAA_18 AAA_11 nSTAND3 MeaB IstB_IS21 RNA_helicase NTPase_1 AAA_5 AAA_assoc_2 MipZ ABC_tran AAA_25 AAA_3 AAA_28 FtsK_SpoIIIE AAA_30 CbiA bpMoxR AAA_23
Other DBs
NCBI-GeneID: 111002980
NCBI-ProteinID: XP_022128982
LinkDB
Position
16:complement(10101953..10103958)
AA seq 344 aa
MSDDDVTIMEVDEVEPATSKSATSVALKTAQLPWIEKYRPQKFSDIVGNEDTVSRLAVFA
KAGNAPNIIIAGPPGVGKTTTILCLARALLGIAFKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSR
CAVLRYSRLTDSQILAKVVEVCGKEGLSYTEEGLSAVVFTAQGDLRAALNNLQSTAQGFG
HVSPDHVFKVCDEPHPMLIRNMLESCLKRDIHEAYKVIAKLVKLGYAAEDIVANIFRVAK
TLEAPDDAKLTLIREIGLTHMRVADGLASPLQLAALLARMCHAS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgagtgacgacgatgtaactataatggaggtggacgaagttgaacctgcgacttcaaag
tctgctacatcagtggcgttgaaaaccgcacagttgccgtggatagaaaagtatcgtcct
cagaaattttcagacattgttgggaatgaagataccgtgtcacggctggctgtatttgca
aaggccggaaacgctcctaacattattatagcagggccgccaggcgtaggcaaaaccaca
actattttatgcttggcacgagctctactcggaatagctttcaaagacgccgtgctagag
ctcaatgcatcaaacgaccgcgggattgatgtagtcagaaataaaataaagatgtttgca
caacaaaaggtcacacttccccctggacgacacaagatagtcatactagatgaggcagat
agcatgactgatggagcacagcaggcccttcgacggacaatggagctttattcaagcacc
acacggtttgctctagctgctaacaacagtgagaaaattatcgaacctatacaatcccgt
tgtgctgtgcttcgttactctaggctcactgactcacagatattggcaaaggtggtagag
gtgtgcgggaaggaaggtctctcgtacaccgaggaagggttgtcggccgtggtgttcacg
gcgcagggtgacctgagagccgcactcaacaacctgcagtccacggcgcagggcttcggc
cacgtcagccccgatcacgtgttcaaggtgtgcgacgaaccgcacccgatgctcatccgc
aatatgctcgaatcttgcctcaagcgggacatacacgaggcctacaaggtaatagcgaag
ctggtgaaactaggctacgccgcggaagacatcgtcgctaacattttcagagtagccaag
actttggaggcgcccgacgacgccaagctgacgctaatccgcgagatagggctgacgcac
atgcgagtggccgacggcctcgcctcgccgctgcagctggccgctctgctcgcgcgcatg
tgccacgcctcttga

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