Pieris rapae (cabbage white): 111002980
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Entry
111002980 CDS
T05162
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03030
DNA replication
prap03410
Base excision repair
prap03420
Nucleotide excision repair
prap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111002980
03410 Base excision repair
111002980
03420 Nucleotide excision repair
111002980
03430 Mismatch repair
111002980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prap03032
]
111002980
03036 Chromosome and associated proteins [BR:
prap03036
]
111002980
03400 DNA repair and recombination proteins [BR:
prap03400
]
111002980
DNA replication proteins [BR:
prap03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111002980
DNA Replication Termination Factors
ELG1-RFC complex
111002980
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111002980
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111002980
Check point factors
HRAD17(Rad24)-RFC complex
111002980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RuvB_N
Rad17
Viral_helicase1
AAA_24
AAA_19
Mg_chelatase
RCF1-5-like_lid
AAA_18
AAA_11
nSTAND3
MeaB
IstB_IS21
RNA_helicase
NTPase_1
AAA_5
AAA_assoc_2
MipZ
ABC_tran
AAA_25
AAA_3
AAA_28
FtsK_SpoIIIE
AAA_30
CbiA
bpMoxR
AAA_23
Motif
Other DBs
NCBI-GeneID:
111002980
NCBI-ProteinID:
XP_022128982
LinkDB
All DBs
Position
16:complement(10101953..10103958)
Genome browser
AA seq
344 aa
AA seq
DB search
MSDDDVTIMEVDEVEPATSKSATSVALKTAQLPWIEKYRPQKFSDIVGNEDTVSRLAVFA
KAGNAPNIIIAGPPGVGKTTTILCLARALLGIAFKDAVLELNASNDRGIDVVRNKIKMFA
QQKVTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSR
CAVLRYSRLTDSQILAKVVEVCGKEGLSYTEEGLSAVVFTAQGDLRAALNNLQSTAQGFG
HVSPDHVFKVCDEPHPMLIRNMLESCLKRDIHEAYKVIAKLVKLGYAAEDIVANIFRVAK
TLEAPDDAKLTLIREIGLTHMRVADGLASPLQLAALLARMCHAS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgacgatgtaactataatggaggtggacgaagttgaacctgcgacttcaaag
tctgctacatcagtggcgttgaaaaccgcacagttgccgtggatagaaaagtatcgtcct
cagaaattttcagacattgttgggaatgaagataccgtgtcacggctggctgtatttgca
aaggccggaaacgctcctaacattattatagcagggccgccaggcgtaggcaaaaccaca
actattttatgcttggcacgagctctactcggaatagctttcaaagacgccgtgctagag
ctcaatgcatcaaacgaccgcgggattgatgtagtcagaaataaaataaagatgtttgca
caacaaaaggtcacacttccccctggacgacacaagatagtcatactagatgaggcagat
agcatgactgatggagcacagcaggcccttcgacggacaatggagctttattcaagcacc
acacggtttgctctagctgctaacaacagtgagaaaattatcgaacctatacaatcccgt
tgtgctgtgcttcgttactctaggctcactgactcacagatattggcaaaggtggtagag
gtgtgcgggaaggaaggtctctcgtacaccgaggaagggttgtcggccgtggtgttcacg
gcgcagggtgacctgagagccgcactcaacaacctgcagtccacggcgcagggcttcggc
cacgtcagccccgatcacgtgttcaaggtgtgcgacgaaccgcacccgatgctcatccgc
aatatgctcgaatcttgcctcaagcgggacatacacgaggcctacaaggtaatagcgaag
ctggtgaaactaggctacgccgcggaagacatcgtcgctaacattttcagagtagccaag
actttggaggcgcccgacgacgccaagctgacgctaatccgcgagatagggctgacgcac
atgcgagtggccgacggcctcgcctcgccgctgcagctggccgctctgctcgcgcgcatg
tgccacgcctcttga
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integrated database retrieval system