Pieris rapae (cabbage white): 111003063
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Entry
111003063 CDS
T05162
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111003063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prap03041
]
111003063
03009 Ribosome biogenesis [BR:
prap03009
]
111003063
Enzymes [BR:
prap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111003063
Spliceosome [BR:
prap03041
]
Complex A
U1 snRNP components
U1 related factors
111003063
Complex B
111003063
Ribosome biogenesis [BR:
prap03009
]
Eukaryotic type
Pre-60S particles
Helicases
111003063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SecA_DEAD
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111003063
NCBI-ProteinID:
XP_022129115
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All DBs
Position
4:6871175..6873920
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AA seq
511 aa
AA seq
DB search
MAHTLARNILRQNHFSILWCPSVKNFTTFKHIIQSAISCDHAVSKFTSNQNRIFIKNRFY
ATNVAQKTDEEYIIENKITILGEDIPSPFRDIDSCGFPDYIKKLLKEQGITTPTVIQSQG
WPIALAGKNFVGIAQTGTGKTLAYLLPAVVHLKETEGRRGRGPRVLIVAPTRELARQIEE
VAKQFQKSLGIRSLCIYGGVSRSRQAEELKYGVDILIATPGRLNDFIDSKVTNLSRCNYV
VLDEADRMLDMGFEPQIRKALEGVPYERQILMFSATWPKEVQYLAKDYLGKFVQVNVGST
DLTANHNIKQNFYVLEHEQKMDKLKQIMHDISGQGFGKILVFTNTKRFVDNLTLSLRRNK
WPAVGIHGDKSQAQRDVIINKFRSGTTNILVATDVAARGLDVDGITHVINYDFPNTSEDY
IHRIGRTGRSQNKGVSYTFLTTEEGRHAHNIIAVLKEAKQEVPEELEFLARDFSNMKNIN
SQMKQKPKPRNYNFRNNRNNRWNKYERNNYY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggctcataccttggcaagaaatattttgaggcaaaatcatttctcaattctatggtgt
cccagcgtgaagaactttacaactttcaaacacataattcagtctgcaatatcgtgtgac
catgctgtctcaaaattcacctcaaatcaaaatcgaatctttataaaaaatagattttat
gcaactaacgtagcacagaaaacagatgaagagtacattattgaaaataagataactatt
cttggtgaagatatacccagtccttttcgagatatagatagctgtggatttccagactac
ataaaaaaattgctgaaagagcaaggcattacaactccaactgtaatacaatctcaagga
tggccaattgcattggcaggtaaaaattttgtaggcattgcacaaaccggaactggtaaa
actttagcttatctcttaccagcagttgttcatttgaaggaaactgaaggtagacggggt
aggggcccaagagtgttaattgtagccccaacaagggagctggcccgtcagattgaagaa
gttgcaaaacaatttcaaaagtctttaggaattcgctctttgtgtatttacggtggtgtc
agccgcagtagacaggcagaagagcttaagtatggtgttgacatattaatagcaacacct
ggacgacttaatgatttcattgatagtaaagttaccaatctgtcaagatgtaactatgtt
gtattggatgaagctgacagaatgttggatatgggttttgagccacaaatcagaaaagca
cttgagggggtaccctatgaaagacaaatactaatgttctcggctacatggcctaaagaa
gtccaatatcttgcaaaagattatttaggaaaatttgttcaagttaatgtgggatcaact
gacttaacagcaaaccataatattaagcagaatttctatgtacttgaacacgaacaaaaa
atggataagctgaaacaaataatgcatgacatatctggtcaaggttttggtaaaattctt
gtatttacaaacactaagaggtttgtggataatttgacactctcattgagaagaaataaa
tggcctgcagtaggtattcatggtgataagtcacaggcacagagggatgttataatcaat
aaattcagaagtggtacaaccaatattctggttgctacagatgtggctgccagaggatta
gacgttgatggaattacgcatgtgatcaactatgatttcccaaatacttcagaagattat
attcaccgaatagggcggactggccgttcacaaaataaaggtgtttcttacacattcctt
acgactgaagaaggacgtcatgcccacaacattatagctgttttaaaagaagccaagcag
gaagttccagaggagttagagtttttagcaagagatttcagcaacatgaaaaatatcaat
tctcaaatgaagcaaaaaccaaaaccaaggaattataattttagaaataatagaaataat
agatggaataagtatgagagaaataattactattaa
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