Pieris rapae (cabbage white): 111003102
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Entry
111003102 CDS
T05162
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111003102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
111003102
03041 Spliceosome [BR:
prap03041
]
111003102
03036 Chromosome and associated proteins [BR:
prap03036
]
111003102
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111003102
Spliceosome [BR:
prap03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111003102
Complex B
111003102
Complex C
U2 SnRNP specific factors
111003102
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111003102
TFTC complex
111003102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
GtgE
Motif
Other DBs
NCBI-GeneID:
111003102
NCBI-ProteinID:
XP_022129155
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All DBs
Position
4:complement(7658128..7666624)
Genome browser
AA seq
1215 aa
AA seq
DB search
MFLYNLTLQGSSAITHAVHGNFSGTKQQEIAISRGKILELLRPDPNTGKVYTLMKVEIFG
IIRSMMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGATEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADSDPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACQVADLTGEDT
PQVYLACGRGPRSSIRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDDDYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGSDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLTDNTVRIISLDPADCLSPRSMQALPASPESLCIVDQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQSAEAVLAVSSRTWLGYQYQNR
FHLTPLSYECLEYAAGFSSEQCTEGIVAISSNTLRILALEKLGAVFNQNYVPLEYTPRKF
LINGDTNHIIILETDHNSYTEEMKKQRRVQMAQEMREAAAGGGPEEQQLANEMADAFLSD
ILPENIFSSPKAGAGMWASQIRVVDMSSGEASTLCKVQLEQNEAAVSVCIVRWAVHGEHA
VPHLVVGVAKDMVLSPRSCNEGSLDVYKIYNTGKLELVHKTPVDEYPGALAAFNGRLIAG
VGRMLRLYDIGRRKLLRKCENRHIPNLIVDIKTNRQRIFVSDVQESIFCVKYKKRENQLI
IFADDTNPRWITNTCILDYDTVAMSDKFGNVAIMRLPHSVTDDVDEDPTGNKALWDRGLL
NGASQKGDMVANFHVGETITSLHRATLIPGGSEALLYATLSGSLGVLLPFTSREDHDFFQ
HLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEASKQKAIAGDLERTPA
EVSKKLEDIRTRYAF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgtacaatctgacgctgcagggctcctcggccattacccatgccgtacatggg
aatttctctggcaccaagcagcaagagatagccatatcgcgtgggaagatactggaactc
ttgcgtcctgacccaaacactggaaaagtgtatactttgatgaaagttgaaatattcggc
attattcgatccatgatggcatttagattgacgggcggtacaaaagattacattgtagtt
ggatcagattctggaaggattgttatattagagtacataccagctaaaaatattttagaa
aaagtacatcaagaaacatttggtaaatctggttgtaggagaattgttccaggacagtat
ttagcaattgatcctaaagggagagcagtaatgataggtgcaacggagaagcaaaagtta
gtttatattttgaatagagatgcagaagctcgtctgactatttcatctccactagaggca
cataaatctaacactttggtatatcacatggttggtgttgatgtgggctttgaaaatcct
atgtttgcctgtttggaaattgattatgaagaagcagactctgatcccacaggtgaagca
gcacagaaaacgcaacagacacttacattttatgaacttgatttgggtttaaaccatgtt
gttcgtaaatattcagagccattggaagagcatgctaacttccttataactgtgcctggc
ggtaatgatggaccttcaggagtattgatttgttcagaaaactatttaacttacaaaaac
ttaggagaccaacatgacatcagatgtcctatcccccgacgcaggaatgacttggatgac
ccagaacggggaatgatttttgtctgctctgccactcataaaaccaaatccatgttcttt
ttccttgcacaaacagaacaaggagatatatttaaaatcacaatagaaactgatgaggac
atggtaactgaaattaaactaaaatactttgacacagtacctgttgcaacatctatgtgt
gttttgaagacaggatttctttttgttgcttgtgaatttggaaaccattacttatatcaa
attgcacacttgggagatgaagatgatgagccggagtttagttctgctatgcctttagaa
gagggtgacacattcttctttgcaccaagacctctgagaaatttggtactagttgatgaa
ttggactccctttcgcccattctagcttgtcaagtggcggatttaactggtgaagataca
ccccaggtgtatttagcatgtggtcgtggcccaagatcttctataagagcgttaagacat
ggtcttgaggtggccgagatggctgtttcagaactaccagggtccccaaatgcagtatgg
accgtgcgaagacataaagatgatgattatgattcttacatcattgtgtcgttcgtaaac
gccacacttgtgctctctatcggcgagactgttgaagaagttaccgattccggtttcctg
ggaactactccaacgctcagttgtcacgctctcggcagcgacgctttagtccaagtttac
ccagatggtataagacacattcgcgcggataaaagagttaatgaatggaaagcgccggga
aagaaatctatagttaaatgcgctgttaaccaacgccaagtcgtaattgcattgactggt
ggggaactggtttactttgaaatggaccctactggccaacttaatgaatatacggagaga
aagaagttatcatccgatgtatcctgcatggccctaggatctgttgcaacaggcgaacag
agagcctggttcttagcagtgggacttactgacaacactgttagaattatttcattagat
ccagctgactgcctttcgcccagatctatgcaggccttacccgcaagtccagaatctttg
tgtattgttgatcaaccatttgagtctggcgctaaatctgcattacacttgaatattggt
cttagcaatggtgtactattaaggacaaccttagactccgtcagtggagatttagcagac
actaggacaaggtatttgggatctcggcctgtgaagttgttcaaagttcgagtgcaatcg
gctgaagcagtcctagccgtatcatctaggacatggcttggataccagtatcaaaacaga
ttccaccttacaccattatcctatgaatgtctggaatatgctgccggtttcagttcagaa
caatgtactgagggtatcgtcgctatctcatcaaacacattaagaattttggctctagaa
aagttgggagctgtctttaatcaaaattatgtcccactggaatatactccacggaaattt
ttgattaatggagacaccaatcacattattattttggagactgatcataattcttataca
gaagaaatgaaaaaacagagaagagtacaaatggcacaagagatgcgtgaggctgccgca
ggaggcgggccagaagaacaacaattggccaacgaaatggcggacgcttttttgtctgac
attctgccggaaaatatattttcttcacccaaagctggtgcaggcatgtgggcgtcacaa
atccgcgtagtggacatgagcagcggcgaggccagcaccttgtgcaaagtgcagctggaa
cagaacgaagccgccgtgtccgtgtgtattgtgcgttgggccgtacacggagaacacgca
gttccgcatttggttgttggagtcgccaaggatatggtgctgtctcctagaagttgtaat
gagggcagccttgatgtttataagatatataatacaggtaaattagaattggttcataaa
actccagtagacgaataccccggagcattggctgccttcaatggacggctaatagctgga
gtaggtcgaatgcttcgtttatacgacattggtcggcggaaacttctcagaaaatgcgaa
aacagacacattcctaacctaattgtagacattaaaactaataggcaaagaatatttgta
tcggatgtgcaagaatccatattctgtgtaaaatacaagaaaagggagaaccaattaatc
atatttgcggatgatacaaatcctagatggataactaatacatgtatcctcgattatgac
acagtagcaatgtcggataagtttgggaatgttgctattatgcgtttgccgcactctgtc
actgatgatgtcgatgaggatcctactggaaataaggctctttgggatagaggtttattg
aatggagcatctcaaaagggagatatggtggcaaatttccatgttggagagactataact
tccctgcatagagctaccctcattcctggaggttcagaggctctattgtatgctactttg
agtggatctctgggagtcctcttacctttcacttcaagggaagaccacgatttcttccaa
cacttggaaatgcatatgagaagtgaaaattcccctctgtgtggcagagatcatttgtcg
tttaggagctactactatccagttaagaatgtgattgacggagacttgtgtgaacaattt
aattctctggaggcgtctaaacaaaaggcgatcgccggcgacctcgaaaggactcccgcc
gaggtgtcaaagaaacttgaagatattagaactcgctacgccttctaa
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