Pieris rapae (cabbage white): 111003170
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Entry
111003170 CDS
T05162
Name
(RefSeq) tropomyosin-1, isoforms 33/34 isoform X1
KO
K10373
tropomyosin 1
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04814
Motor proteins
prap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111003170
04820 Cytoskeleton in muscle cells
111003170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prap04812
]
111003170
04147 Exosome [BR:
prap04147
]
111003170
Cytoskeleton proteins [BR:
prap04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
111003170
Exosome [BR:
prap04147
]
Exosomal proteins
Exosomal proteins of microglial cells
111003170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
PUMA_CC
DUF1664
CALCOCO1
Trimer_CC
Fez1
Laminin_II
CENP-F_leu_zip
DUF745
Uds1
TPR_MLP1_2
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
111003170
NCBI-ProteinID:
XP_022129231
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All DBs
Position
5:complement(5229039..5252119)
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AA seq
514 aa
AA seq
DB search
MSASAPHAHGRTPVRRRGHQHHPRLRGDRLPAPGPTVNKTPSKEVTLETETDDVVSCVNS
VSESQEMTRTNSDDALSNRNTGDDSNIDDDISFDTNILESDTIELSDDDFSFKEERSSGD
GAEMVPLVSDIISDDDPETAELAKLRCPSECTEVLAARENRRNRRCADYPGLAFGSSIFS
SDTIMKFSIIKNELQNIKNTALKRAESEVAALNRRIQLLEEDLERSEERLATATAKLAEA
SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADL
ERAEERAETGESKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKEAE
ARAEFAERSVQKLQKEVDRLEDDLINAKEQFNDIGNDIDDTAVELIPGVEMTQSQMERIA
RAKEERLKKPPQWAHQPQPKEPTPPPKEPTPPPKAATPPPKEPTPPPAEPAPAEPAPAEP
APAEPAPAEPAPAETPAEAPAEAPAEAPAETPAE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtccgcgccccacgcccacgggcgcacccccgtgcggcgcagggggcatcaa
caccacccgcggttgagaggcgaccgccttcccgcccccgggccaaccgtaaacaaaact
ccgtccaaagaagtgaccttagaaaccgaaacagacgatgttgtgtcttgtgtcaatagt
gttagtgaatctcaagaaatgacaaggacaaatagtgacgatgcactttcaaatcgaaat
acaggcgacgactctaatatcgatgatgatattagctttgacacaaatattctagagtcg
gacacaattgaactctccgatgatgatttctcttttaaagaagaaaggtcatcgggtgat
ggcgcggagatggtgcctctagtctccgatatcatttcggatgatgatcctgagacagca
gaacttgctaaacttagatgccctagtgaatgtactgaagtgttggcagctagagaaaat
cgtagaaatagaagatgtgcagattatcccggtctcgcatttggtagttctattttctca
tctgacacaataatgaaattttccattatcaagaatgagttgcagaatataaagaatacg
gcattaaaaagggccgaatccgaagtggctgcactcaaccgtcgtatccaattgttggag
gaagaccttgagaggtctgaggagagactcgcaacagccacagctaagctcgctgaggcc
agccaagccgccgatgagtctgaacgtgcccgcaaggttctggagaacaggtcattggct
gatgaagaacgtatggacgccttggagaaccagctgaaagaagccagattccttgctgag
gaagctgacaagaaatacgatgaggtcgctcgtaagctggctatggttgaggctgatttg
gagcgcgctgaggagcgcgccgagaccggtgaatccaaaatcgtcgagcttgaggaggaa
cttcgcgttgtcggtaacaacctgaagtcacttgaggtctctgaggagaaggcaaaccaa
cgtgaggaggagtacaaaaaccaaatcaaaaccctcaccacccgcctaaaggaggctgaa
gctcgcgctgaatttgctgagcgctctgtccaaaaactacaaaaggaggtcgacaggctc
gaagatgacctgatcaacgccaaggagcagttcaatgacatcggcaacgatatcgacgac
actgccgtcgaactgatccccggggtcgaaatgacacagagtcagatggagaggatcgcg
agggccaaggaggagcgactcaagaagcctccgcaatgggcccaccagccccagcccaag
gagcctactcctccaccgaaggagcccactccgccgcccaaagctgccacgccaccgccc
aaggagcccacgccgccaccagcggaaccggcccccgccgaacccgcccccgccgaaccg
gctccggccgaaccggctccggccgagcctgcgccggctgaaacccctgcagaagctccc
gcagaagcccccgcagaagctcccgccgaaactcccgccgaataa
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