Pieris rapae (cabbage white): 111003307
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Entry
111003307 CDS
T05162
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prap04131
]
111003307
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prap04147
]
111003307
Membrane trafficking [BR:
prap04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111003307
Exosome [BR:
prap04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111003307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_LRRK2
WD40_RFWD3
Beta-prop_WDR35_TULP_N
VPS11_N
Motif
Other DBs
NCBI-GeneID:
111003307
NCBI-ProteinID:
XP_022129428
LinkDB
All DBs
Position
Z:complement(2214236..2224300)
Genome browser
AA seq
937 aa
AA seq
DB search
MLQPLRLDIKRKLTARSDRVKCVDQHPTEPWLLCAVYDGDVNIWNYETHTQIKRFEVCDQ
LPVRSAKFVPRKNWVVTGSDDMQIRVFNYNTLECVHSFEAHSDYVRCIVVHPTQPFILTS
SDDLLIKLWNWDRNWACQQVFEGHTHYIMQIAINPKDNNMFASASLDTTVKVWQLGASIS
NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHTHNVSAVSF
HPELPILLTGSEDGTVRLWHAGTYRLEFSLNYGFERVWTICSLHGSNNVSIGYDEGTIMI
KIGREEPAISMDVSGGKIIWAKHSEMQQVNLKALPEDIDIKDGERVPVVAKDMGSCEIYP
QTIEHNPNGRFVVVCGDGEYIIYTAMALRNKAFGSAQEFVWAQDSSKYATLENSSTVRVF
KNFKELKSFKPEYGAQGIFGGCMLGVKSISGMAFSFYDWERLELIRRIEIQPRHVYWSEP
GNLVCLATDESYFLLSYNANVVNLSRETNTNITEDGIEDSFDLIGEVNEVVKTGLWVGDC
FIYTNSLNRINYYVGGEIVTISHLDHTMYILGYVAKENRLYLNDKELNVVSYSVLLPVLN
YQTAVMRRDFETADQILPTIPHEHRTRVAHFLEKQGFKQQALAVSTEPEHKFELALSLGE
LQKAKQLAEEATIAEGMPSETSAARWSRLGAAAAAAADTELTKDCYQNAKDFSALLLFAS
STGDGELLEEVANRSAEEGDDNIAFVTHFMLNDLDKCLELLIKSNKLPEAAFFARSYIPS
QVCEVVSLWRDAVGSTNKKSGQSLADPLKYENLFPEYAESLVLEAFQRERGYSQYNDLTN
TINLTSRQATSNVEREISAEMAEITKRLGPAPDSIINTPQYYDAETAEGSADQMDTIAKR
KDSLDMEEIVREVDVLLEDTRLSPDLLDDADLFDGIE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgctacagccgctaagacttgatataaagaggaagttgactgcgaggtctgatcgcgtc
aagtgtgtagatcagcatcctacagaaccctggcttctgtgtgcggtttatgatggcgat
gtcaacatttggaattatgaaacacacacgcagatcaaaagatttgaggtttgtgatcaa
ctacctgttaggtctgcaaagtttgtgcctagaaagaattgggtggtcacaggctcagat
gatatgcagataagggtttttaattataatactctggagtgtgtgcattcatttgaggcg
cattctgattatgttagatgtattgttgtacatcctacacaaccttttattcttactagc
agtgatgatttgttgataaaattatggaattgggaccgcaactgggcatgccagcaagta
tttgaaggccacactcattatataatgcaaattgctattaatcctaaagacaacaacatg
tttgctagtgccagtttagatacaacagtgaaggtttggcaactgggtgcttctatatca
aactttacattggaggggcatgaaaaaggagttaattgtgtggactattatcatggagga
gataagccttaccttataagtggtgcagatgaccgccttgtaaagatatgggactatcaa
aataaaacatgtgttcaaacattagaaggtcatacacacaatgtatccgcagtatcattc
cacccagagctgccaatccttttgacaggatcagaagatggcactgttaggctctggcat
gcaggaacatatcgcctggagttttctcttaactatgggtttgagcgtgtctggacaatt
tgttctctacatggttctaacaatgtatcaattgggtatgatgagggcaccataatgata
aaaattggaagagaagagccagctatatcaatggatgtgagtggaggaaaaatcatatgg
gccaaacattctgaaatgcagcaggtcaacttaaaagcactccctgaagatattgatatt
aaagatggagaacgtgttcctgttgttgcaaaggatatgggttcatgtgaaatatatcca
cagacaattgagcacaatcccaatggacgttttgtggttgtatgtggtgatggagaatac
attatttacactgccatggccttacgcaacaaagcttttggatccgcgcaagaatttgtc
tgggcccaggacagctcgaaatatgctacattagaaaattcaagcactgtccgtgtcttt
aaaaactttaaagaattaaagagcttcaagccagagtatggagctcaagggatctttggt
ggctgcatgttaggtgtgaagtcgataagcggtatggccttctcgttttatgattgggaa
cgacttgaactgataagaaggatagaaattcaacctcgccatgtgtactggtcagaacct
ggaaatttggtgtgccttgccacagatgagtcttatttcctcttgagctataatgccaat
gttgttaacctctcacgtgagacaaacaccaatattactgaagatggtatagaagattct
tttgatctgattggtgaagtgaatgaagttgtgaaaactggtctgtgggttggcgactgc
ttcatatacacaaattcattaaatagaattaactattatgttggtggagagatagtcaca
atatcacacctcgatcacactatgtacattttgggatatgtcgcgaaggaaaatcggttg
tacttaaatgacaaggagttgaacgttgtgtcctattcagttcttctcccagttcttaat
taccaaacagcggtcatgcgacgtgactttgaaactgctgatcagatcctgcccaccatt
cctcacgagcatcgtactagagtcgcacatttcctggagaagcagggcttcaagcagcaa
gcattagcagtgtcgacagagccagaacataagtttgagctggccctatcgttgggtgaa
ctgcaaaaggccaaacagttggccgaggaagccaccattgctgagggtatgccttccgaa
acgtctgctgccaggtggtccaggcttggggcggcagcggctgcggcggccgatactgaa
ctaacgaaggattgctatcagaatgcgaaagatttcagtgccttacttctctttgccagc
agtacaggtgatggtgaactgttggaagaagtagcgaaccgttctgctgaagaaggtgac
gacaacatcgccttcgtaactcattttatgttgaacgaccttgacaagtgccttgaacta
ctaattaaatcgaacaaactgcccgaagccgcattttttgccagatcatatatcccttca
caagtctgcgaagtagtgtcattgtggcgtgacgcggtcggctccacgaacaaaaagtcc
ggacaatccctcgccgatcctttgaaatatgaaaatctcttccccgagtacgcggagtcc
ttggtcctggaggcatttcagcgggaaagaggctattctcagtacaatgatttgacaaat
acgattaatttaacgagtcgacaggcaacaagcaacgtagaacgagaaatttcagctgaa
atggcagagatcacgaaacgactggggccggcacctgactctataattaatacgccacag
tactatgacgctgaaacggccgaaggatcggcggaccaaatggatacgatcgcgaaacgc
aaagattctctcgacatggaagagattgtaagagaggtcgatgttttgttggaagacaca
cgtttaagcccggaccttttggacgacgcggacctgtttgacggaatagaatag
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