Pieris rapae (cabbage white): 111003310
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Entry
111003310 CDS
T05162
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prap03000
]
111003310
03036 Chromosome and associated proteins [BR:
prap03036
]
111003310
Transcription factors [BR:
prap03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111003310
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111003310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_11
Staphostatin_A
zf-C2H2_15
zf-met
Motif
Other DBs
NCBI-GeneID:
111003310
NCBI-ProteinID:
XP_022129438
LinkDB
All DBs
Position
Z:complement(3072236..3081348)
Genome browser
AA seq
670 aa
AA seq
DB search
MAPLRGGNSRNKASSKQAMTVSENQTTQGPSTPRVTMKEDIKEPEQSVTYFVDEEGRYYY
QPAVDNENLTMTIDNTNDSDQKHIIVNEDYQTVTLVPSESDMGEVSYVLVVQDDKQVMNI
NIKEENDGDVYTFEDEEDIAEKADEPSDSLAKPKRKQKTSRPNYNCTYCNYVSHRKYLLL
RHMKSHSVDRPFKCSVCDRAFKTRVSLNNHTNTHNGIKPHICKYCSTPFTTSGELVRHVR
YKHTHEKPHRCTQCDYASVELSKLRRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRTHT
GEKPYKCDSCNMSFTQSNSLKAHKLIHNVSEKPVYACELCPAKCGRKTDLRIHIQKLHTS
DKPLKCKRCGKTFPDRYSCKVHNKTHEGEKCYKCELCPYASTTLRHLKAHMLKHTDQKPF
VCDQCNQCFRQKQLLRRHQNLYHNPDYSPKPPKEKTHVCHECNRSFAHKGNLIRHLAIHD
PDSNHLEQALALRIGRQKKLRPFPEKSIREENSSSLQEEVVKIEVANNENKQDENMEITG
EENQEYVVLEVIQLEDGSEQQVCLITPHYSDMERREESDPANADDNSEGAQDLFYKTQLR
KTIEQNLKAEKDLDTCFGFDEEEEEEEVETVPKFEEQQNEEGFRLHYELSDEENFTLHYE
SSDASEKDGE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcttcgtggagggaattctagaaacaaagccagcagcaagcaggctatgacg
gtttctgaaaatcaaacaactcagggaccctctactccaagagtcaccatgaaagaagat
attaaggagccagaacaaagtgtaacttattttgtggatgaagaaggtagatactattac
cagcctgctgtggataatgaaaatcttaccatgactattgataatacaaatgattctgat
caaaaacatattatagtcaacgaagattaccaaacagtcacattagtgccatcggagtct
gatatgggtgaagtcagctatgtgctggtggttcaggatgacaagcaagttatgaatatt
aatataaaggaggagaatgatggtgatgtttatacatttgaagatgaagaagacatagca
gaaaaagctgatgagccatcagattcattggctaagccaaaacgcaagcaaaagacctcg
cggcctaattataattgcacttactgtaattatgtgagtcacagaaagtatttgctctta
aggcatatgaagtcacactcagttgaccgaccatttaagtgttctgtttgtgaccgggcc
tttaagacccgggtttcgctgaacaatcacacaaacactcacaatggtatcaagcctcat
atttgcaaatattgcagcacaccatttactacttcaggtgagcttgtaagacatgttcgc
tataagcacactcatgagaagccacaccgttgtactcagtgtgactatgcctctgtggaa
ctgtctaagctgagaagacatattcgctgccacactggagagagaccatatcagtgcccg
cattgtacatatgcatcgccggatacgtttaaattaaaacgtcacttgcgcacgcacacc
ggcgagaagccatacaaatgcgattcttgcaacatgtctttcacccaatccaactcgctg
aaagctcacaaacttatccacaatgtgtcagagaagccagtgtacgcttgcgagctttgc
ccggcgaagtgtggacggaaaactgatttgcgtattcacattcagaagttgcatacatcg
gacaagccccttaaatgcaagcgttgtgggaaaacctttccggaccgatactcttgcaag
gttcataataagacccatgaaggcgagaaatgctacaaatgtgagctttgtccctacgca
tcgacaacgcttcgacacttgaaggcgcacatgctaaaacatactgaccaaaaaccgttt
gtctgcgatcaatgtaaccaatgctttaggcagaagcagcttcttcgtcgtcaccaaaac
ttgtaccacaaccctgattattcgccaaaaccacccaaagagaaaactcacgtttgtcac
gagtgtaaccgcagctttgcacacaagggaaacctcattcgtcacttggctatacacgac
ccagattctaatcaccttgagcaggcgttagctctaaggattggcagacagaagaaactt
aggccatttccggaaaaatcaatacgggaagagaattccagttcgcttcaagaagaagtt
gttaaaatagaagtggccaacaatgaaaataaacaagatgaaaatatggaaataactggt
gaagaaaatcaagagtacgtggtcttagaggtcatacaattggaagatggatctgagcaa
caagtgtgcctaatcacaccgcattactctgacatggagagacgagaagaaagtgatcca
gctaatgcagatgataattcagaaggagcccaagatttattctacaaaacacaactaaga
aagacaatcgaacaaaatttgaaagcagagaaagacttagatacttgctttggatttgat
gaagaagaagaagaagaagaagtggagactgtacctaaatttgaggaacagcaaaatgaa
gaaggatttagactccattatgaattaagcgatgaagaaaattttacacttcactatgag
tcaagtgatgcctctgaaaaggatggtgagtaa
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integrated database retrieval system
