Pieris rapae (cabbage white): 111003475
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Entry
111003475 CDS
T05162
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111003475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prap03021
]
111003475
03036 Chromosome and associated proteins [BR:
prap03036
]
111003475
Transcription machinery [BR:
prap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111003475
Coactivators
SAGA/TFTC/STAGA complex
111003475
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111003475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Phage_T7_Gp5_9
T2SSM_b
Motif
Other DBs
NCBI-GeneID:
111003475
NCBI-ProteinID:
XP_022129682
LinkDB
All DBs
Position
13:150808..156399
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AA seq
667 aa
AA seq
DB search
MQPPLVIKQGTTTGQVNMQSGMMTVPMTVNSSISNTIPNVMTINKPGGQNVVVTTQNVGS
GQQSIIPNVQIINTRPGAPSVSAQKSVATVSPRVVIGTPQVVGTRAAVPGITLQTLQSLQ
QGQQGHLLLKTENGQYQLLRVGPAPAGSTLTAPQPQTLRLSTVPAHPGVVTASTSVAVPQ
MAAQLPAPAPSAQATSAQTAHSAAQSAPPSSAPQAPVVTTQKPLDNTKEKCRNFLANLLD
LSSKEPKSVERNVRNLIQELIDAQVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQS
MCTKELVIEGINPPSPLVAFAPPAQAQTTLVTNVQMQKATAKPGGSIAVLQNIPLHTKIN
VTKVGKTMTVNSKANFARPGNPSAALSTVLTPGKSLLKDKEKKSTLQFTQPFGDDKMTGD
DDINDVAAMGGVNLAEETQRILGSTELIGTQIRSIKDEYLVPMGIMQNRVKAVIGKHGLE
DASAEVSSLVCHAVHERLKSLLEKLAVVAQQRSDLLIKTDSCYDVTQDVKGQLKFLEELD
RVDRKRREDSEREILLRAAKSRSKNEDPEQAKLKAKAKEMQRAELEELRQREANLTALQA
IGPRKKARLDGPADSGASVPGNNSFPGRSQLALRTRLKRINLRDMIFLLEQERDTAYTTL
LFRSYLR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaccacttgtgataaagcaaggcacaactacaggacaagtcaacatgcaatct
gggatgatgactgtaccaatgacagttaactcaagcatttcaaatacaattcccaatgta
atgactataaataaaccaggagggcaaaatgtagtagtgacaacacaaaatgtaggatca
ggacaacaatccattattccaaatgttcagataattaatacacgacctggagctccatct
gtttctgctcaaaagtcagttgcaacagtctccccgcgagttgtcattggaactccacaa
gtggtgggaacaagagctgctgtacctggtataacgctgcaaacacttcaaagtctacaa
caggggcagcagggtcatttgttgttaaagacagagaatggtcaataccagctgctgagg
gtgggtccggcaccggctggcagcaccctcacggcacctcagccacagaccctccggctg
tcaaccgtgccggcacaccccggcgtggtaacggcgtcgacgagcgtcgcagtgccacag
atggcggcgcagctcccggcgcccgctccttccgcccaggccacgtccgcccagaccgcc
cattccgcagcccagagcgctccgccgtcttcggctccgcaggcccccgtcgtcaccact
cagaagcccttggacaacacgaaggagaagtgccgaaactttctggcgaacctgttggat
ctttcgagtaaggagcccaaatcggtggagaggaacgtgagaaacctcatacaggagctc
atcgatgctcaggtggaacccgaggagttctgcgatcgactcgagaggctcttgaatgcc
agtccgcagccgtgcctcataggcttcttaaagaaaagcttgcccctgctgcgccagtcc
atgtgcaccaaggagctggtgatcgagggcatcaaccccccctccccactcgtagccttc
gccccgcccgctcaagctcagacaacgctcgtcaccaacgtacaaatgcaaaaagcgacg
gccaaacccgggggctccatagcggtgttgcagaacattccactccataccaagatcaac
gtgacgaaagtcggcaaaacaatgacggtgaacagcaaagcgaacttcgcgaggcccggg
aatccctcggcggccctctccaccgtcctcacgcccggaaaatctctgctcaaggacaaa
gagaagaagtccactctgcagttcacccagccattcggcgacgacaagatgaccggggac
gacgacatcaacgacgtggcggccatgggaggcgtcaacctggccgaggaaacccagagg
attctgggttcgactgaactcatcggcactcagataaggtccataaaggacgagtacttg
gtgccgatgggcatcatgcagaaccgggtgaaggccgtcatcggaaagcacggcctggaa
gacgcgtcggccgaagtgagcagcctcgtgtgtcacgccgtgcacgagaggctcaagagc
ctgctggagaagctggccgtcgtcgcccagcagaggagcgatctcttgatcaagaccgac
tcctgctacgacgtcacccaggacgtgaagggtcagttgaagttcctggaggagctggac
cgcgtggaccggaagagaagggaggactccgagagagagattcttctcagggccgccaag
tcacgctccaagaacgaggatccggaacaggccaagttgaaggccaaggcgaaggaaatg
cagcgcgccgagctggaagagctgcggcagcgagaggccaacctgaccgctctgcaggcc
atcgggcccaggaagaaggccaggctcgacgggccggcggacagcggagccagcgtcccg
gggaacaactctttcccgggtcgcagtcaactggccctgaggactcgtctgaagcgcatc
aacctgcgggacatgatctttcttctggagcaagagcgagacacggcctacaccactctt
ctgttccggagctacctgagataa
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