KEGG   Pieris rapae (cabbage white): 111003530
Entry
111003530         CDS       T05162                                 
Name
(RefSeq) poly(U)-binding-splicing factor half pint isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111003530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:prap03041]
    111003530
Spliceosome [BR:prap03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111003530
 Complex B
    111003530
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 111003530
NCBI-ProteinID: XP_022129798
LinkDB
Position
5:complement(11250917..11255665)
AA seq 549 aa
MEFMSTLGFLPGAVYELQQRGEVAAGPAARGAALPAVLGGQLPRLNTDQADAVARAKKYA
MEQSIKMVLMKQTLAHQQQQMASQRTQVQRQQALALMCRVYVGSISFELKEDTIRQAFLP
FGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLSLEQMNGVMLGGSSVHRNIKVVGRPS
NMPQAQAVIDEIQEEAKQYNRIYVASVHPELSEDDIKNVFEAFGPITYCKLAYGASAHKH
KGYGFIEYASLPAALEAIASMNLFDLGGQYLRVGRAITPPNALLGPPAASAMPTAAAVAA
AAATAKIQAMDAVASNAVALGLTKLNALGVPPAAALPTLAAALPVSLPVTLPAAMPVALP
VTVPVALPASLPAGPPPAATIPPPGVVIPPAPPRVEIAAAESEVGGAQAALQRKLLDTSP
DTLQQQESLSISGQSARHLVMQRLMRRRVSRTLLLRNMVSPRDVDEALHHEIRDECGKWG
QVQRLVIYNERQSEDDDPAHAHVKIFVEFAESEQASAAASALEGRYFAGRTVRAALYDQD
LFDHGDLSA
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggaattcatgagcacgctcgggttcctgcccggtgccgtttacgagttgcagcaacga
ggcgaggtggcagcggggccggcggcgcgaggcgcggccctgcccgcggtactcgggggg
cagctgcctcgactcaacactgaccaagccgatgccgtcgcgcgcgccaagaagtatgcc
atggagcagagtatcaaaatggttctcatgaagcagacgttggcgcaccagcagcagcaa
atggcttcgcagcggacacaagtacagcgtcaacaggcactcgcgctcatgtgcagggtg
tacgtgggttcgatttcgtttgaactgaaggaggacaccatccggcaggcgtttctgccg
ttcgggccgatcaagtccatcaacatgtcgtgggaccccgtgacccagaagcacaagggg
ttcgccttcgtcgagtacgagattcccgaagcggcgcagcttagcctagagcagatgaac
ggcgtcatgctcggtggcagctccgtccacaggaacataaaggtggtcggccggccttct
aacatgccgcaggcgcaggccgtgatcgacgagatccaagaggaggcgaagcagtacaac
cgcatctacgtggcgtccgtgcaccccgagctgagcgaggacgacatcaaaaacgtgttc
gaggccttcgggcccatcacgtactgcaagctcgcttacggtgcctccgcgcacaagcac
aagggctacggcttcatcgagtacgcttcgctgcccgccgctctcgaggccattgcgtcc
atgaacctgttcgacctaggcgggcagtaccttcgcgtgggtcgcgccattaccccgcca
aacgccctgctgggcccgcccgccgcctccgccatgcccacggctgccgccgtcgccgcc
gccgccgccacggccaaaatccaggcgatggatgccgtcgccagcaacgccgtcgcgctc
ggcctcacaaagctcaacgcgctcggcgtgcccccggccgccgcgctgcctacgctcgcc
gcggcgctgcccgtctctctacccgtgacgctgccggccgcgatgccggtggcgctgccc
gtgaccgtccccgtcgcgctgcccgcgtcactgcccgcaggcccgccgccggccgctacg
attcccccgcccggcgtggtgattcctcctgccccgcctcgcgtcgaaatcgcggctgcc
gaaagcgaggtcggcggcgcgcaggcggcccttcagcgcaagctgctcgacacatcgccg
gacacgctgcaacagcaggagtcgctgtcgatctcggggcagtcggcgcgccacctcgtc
atgcagcgcctgatgcggcgccgcgtctcccgcacgctgctgctgcgcaacatggtgtcg
cctcgagacgtggacgaggcgttacaccacgagattcgcgacgagtgcggcaagtggggc
caggtgcaaaggctcgtcatctataacgagcgccagagcgaagacgacgacccggcgcac
gcgcacgtcaagatcttcgtggagttcgcggagtcggagcaggcgagcgcggccgcctcc
gccctggagggccgctacttcgccggacgaacggtgagagccgccctctacgaccaagac
ctctttgaccacggggacctgtccgcctga

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