Pieris rapae (cabbage white): 111003659
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Entry
111003659 CDS
T05162
Name
(RefSeq) nidogen
KO
K06826
nidogen (entactin)
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111003659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
prap04990
]
111003659
Domain-containing proteins not elsewhere classified [BR:
prap04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
111003659
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
EGF
EGF_CA
cEGF
EGF_MSP1_1
hEGF
DUF7601
MtxA_IG-like
Motif
Other DBs
NCBI-GeneID:
111003659
NCBI-ProteinID:
XP_022129977
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Position
9:complement(6007385..6015480)
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AA seq
1342 aa
AA seq
DB search
MWTGAYILCLVVCVGAITRDQFYPYGQGLDQRLPRGAEVASPELPLNIPIIFFGETYETI
FVNNYGVLSFRADIPSFLNAEFPLPYPSIAAFYTNVDTTESGAVYFRETNDSHVLLKAAD
SVQRNFHEYDDFQPTSVFLATWIEVKFPSDQIQDRSNSFQIAVISNGNESFVELLYPERE
IQWIQKEVVPGSLPDAKAQAGFVAEDGRVFTLRGSGSHQIRNIVSWSNTQEPGKYIYRVG
VIAQNETVAVPDQYDEIEAEIEEESKTCAQSGPSVCHIQARCVDYQAGICCQCNDGFYGN
GKSCVKDDLPLRVHGKLNGILNNVNLNDVDLQAYVVVADGRSYTALSQSPPSLGSSLQLL
SVFGSVVGWLFAKPIGLAKNGYQLTGAHFNHTADIYFPDTSDRVIINQEFMGHDVFDQIT
LEGDIRGTIPNIPAGSRLEVTEYEEQYTFVEAGTIHSESTRTFTNKITGQKYVQRVSQTF
TFNTCRFAPFSDEENISTQLKVIKNYLGYETRENIVRYGTSNKIVPIGQEDPCIEGRNTC
NPHSTCIAQGDTFTCVCQSGFTSTYIDGNTGCIDIDECLAGTHNCDINADCFNHEGGFQC
RCRQQFEGNGVTCNWISRCKDKNCDPNAQCIDNPGEDPICLCNTGYTGDGQNCQKSQENK
CDNCSPYGYCGYDSTNTLTCLCNSGYDGDGFYCTEAIVEEVTPSSEKIDSETTQAYYVPD
AVETTPSPTESDYNATYVLPNCNFFGCSCPEGYLNYQDDRGNDLCRIESFKEPLVPLDND
TSIRCNADSDCPPNAICSFPTEAYLSNDQDEGQCVCPEGYEGDAYECIEKTGPSCSCGLG
AHCIETAAGDLICVCDSGYHGDGYNCRPNFICTNNYQCEYNAECRPDPNTNQNICQCIDG
FIKDQNDACIPDKQLCNGAVCAEHASCLFDQEVGVNYCHCDDGYEGDGISECLPQGRTCD
VLNDCDQNAICTPVDNTYLCICREGYTGDGYNCNLEMNCRVNPYLCDIHASCLKTSDGYE
CECNSGYNGNGSVCELNPRQAGNFLVASDGASVYRVPFSVTPRNFATPFYSATYQIAVGI
DVDCLSAKIYWGDVVGNTIKRASYDGSGYEQFLSNDVQSPEGIAIDWSARNIFWTDSKKV
TIEVANLDTKVRKVLFAKEGIYNPRGIAVHPGKGKIFWSDWNRSGPKIEWANMDGSQRGI
FLDQTDVKLPNSLAIDWVRDRLCYADAGLYSIRCVGIDNMEKEIIAPNCSYPFGLAINGD
KFYWTDWKTLKIESIDTFTQVKGQVPIATASRRLYGVSAAPNECPSLSNVCQYRNGNCDS
NQICLPNGQGGRTCVEGVRSQN
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgggcgcgtatatactgtgtctggtggtgtgcgtgggcgccattactcgggac
caattctacccctatggccagggtctggaccagagactcccacgcggcgcagaagtagcc
tcacctgaactgccgcttaatattccaatcatcttcttcggagagacctacgagaccatt
tttgtaaacaactatggtgtactgtccttcagagcggacataccaagtttccttaacgca
gagtttccgctaccctatccatcaatagcagcgttctacactaacgttgatacaactgaa
tcaggcgctgtttactttagagaaaccaatgactcacacgtgctactcaaggcagctgac
agtgtacaaaggaatttccatgaatatgacgactttcagccaactagcgttttcttagca
acgtggatcgaggtcaaattcccaagcgatcagattcaagatcgatcgaatagtttccaa
atagctgttattagtaatggtaatgaaagttttgtggaactgttgtaccctgagcgtgaa
atacaatggatacaaaaagaggttgtacctggcagtttacccgacgctaaagcacaggcg
ggctttgttgctgaagacggacgtgtgtttactcttagaggttctggaagtcatcagatc
agaaatattgtatcgtggtctaacacacaagagcccgggaaatatatctatcgagttggt
gtcatagcgcagaacgaaacggttgcagttcctgatcaatatgatgaaattgaagcggag
atagaagaggaatcgaaaacttgcgcacagagtggtcctagtgtatgccatattcaggca
cgttgtgtcgactaccaggcaggaatttgttgtcagtgcaatgatggcttttatggtaat
ggaaaatcctgcgtcaaagacgatcttccccttagggttcacggtaaacttaatggaatc
ttaaacaacgtaaatctcaatgatgttgacctacaggcatacgttgttgtggccgatggc
cgatcctacacagccttgtcgcaaagtccaccgtcactgggtagtagtctccaactttta
agcgtcttcggtagtgttgtgggctggttatttgcaaagccgatcggattagccaaaaat
gggtaccaactcaccggtgcacattttaatcacaccgcagatatttatttccctgataca
agtgacagagttattataaaccaggagttcatgggacatgatgtctttgatcagataaca
ctggaaggtgatattcggggtactatacctaacattccagcgggaagtagattggaagtc
actgaatatgaagaacaatacacatttgtggaagcaggaacaattcacagtgaatcaaca
agaacttttaccaacaaaattacgggtcaaaagtacgtacagagggtatcacaaacgttt
actttcaacacttgtaggtttgcgcccttttcagatgaagaaaatatttctacacaatta
aaagtaattaaaaattatctaggatatgaaacacgggaaaacatcgtaagatatggaaca
agcaataaaattgtacccatcggtcaagaggatccctgcatagagggcagaaatacttgc
aatcctcatagcacatgtattgcccaaggagacacgtttacatgtgtgtgccaatcagga
tttacaagtacttatatcgacggaaacacgggttgcattgatatcgacgagtgtcttgct
ggaacgcacaattgtgatataaacgcagactgtttcaatcacgaaggcggtttccaatgc
agatgtcgccaacagttcgaaggaaatggtgtaacttgtaattggatatcgcgatgcaaa
gataaaaattgcgaccccaatgctcagtgcatagacaatccaggcgaagatccaatttgc
ttatgtaatactggatatactggtgacggtcaaaattgtcagaagagtcaagaaaataaa
tgtgataactgttctccgtatggatactgcggatatgattctactaacactttaacatgt
ttgtgtaattctggatatgatggagatggcttttattgtacagaggctattgtagaagag
gtgacaccatcatctgaaaagattgatagcgaaactacacaggcctactatgtacctgat
gctgtagaaactaccccttcaccaacagaatccgattacaatgcaacttatgtattgcct
aactgtaacttcttcggttgtagttgtccagaaggctacttaaattatcaagacgacagg
ggcaatgatttgtgccggattgaatcttttaaggagcccctcgttccgttggataatgat
acatcaattagatgcaacgcagacagtgactgtccaccaaatgcaatatgttcgtttcca
actgaagcttacttgtctaatgatcaagatgagggacaatgcgtatgtccagagggttat
gaaggtgatgcctacgagtgcatagagaaaactggacctagctgttcttgcggcctcggc
gctcactgtatagaaactgcagccggtgatttaatatgcgtctgtgattcaggttaccat
ggggatggatacaactgccgtccgaatttcatttgcactaacaactatcaatgtgaatat
aacgccgagtgtcggcctgaccctaacactaaccaaaacatttgccagtgcattgacggt
tttataaaagaccagaacgatgcgtgtattcccgataaacaattatgtaacggtgctgtt
tgtgccgaacatgcatcctgtctattcgatcaagaggttggcgttaattattgccactgt
gatgatggttacgaaggagacggaatatctgaatgtctaccccaaggaagaacgtgtgac
gttcttaacgactgtgatcaaaatgcaatttgcacaccagttgacaatacttatctatgt
atttgtagagaaggatatactggtgatgggtataattgtaatctagagatgaattgtagg
gtgaatccatacctatgcgatattcacgcttcctgtcttaagactagcgatggatatgaa
tgcgagtgtaattctgggtacaatggaaacggcagtgtgtgcgagcttaatcctagacaa
gcgggcaactttctggttgctagtgacggcgcgtccgtatatagagtaccattttccgta
acaccaagaaatttcgcaaccccattttacagtgctacctatcaaattgctgtcggtatc
gatgtagactgtttatccgcaaaaatatactggggtgatgttgttggaaatacaattaaa
cgtgcctcttatgatggctctggctacgaacaattcttatcaaacgatgttcaatctccg
gagggtatcgctattgattggtctgcaaggaatatattctggaccgattccaagaaagta
accatcgaagtagctaatcttgacaccaaggttagaaaggtattatttgctaaagagggt
atatacaatccacgaggcatagcggtccacccaggaaaaggaaaaatcttttggtctgac
tggaatcgttctggtcccaaaattgaatgggcgaacatggatggatcacaaagagggatt
ttcctagaccaaacggacgtgaaactcccgaactctttagccatagactgggttagagac
agactatgttacgctgacgctggtctttatagtattcgatgtgtgggaatcgacaacatg
gaaaaggaaataatcgcccccaattgttcttatccattcggcttagcaattaatggtgat
aagttctattggactgattggaaaacattaaaaattgagtccatagacacattcacacag
gtgaaaggtcaggtgccaatagcgacggcctctcgaagattgtatggtgtttctgccgct
cccaacgagtgcccatctttgagcaatgtttgtcaatacagaaatggtaactgtgattca
aatcaaatttgcctaccaaatggccaaggtggaagaacgtgcgtagaaggagttaggagt
caaaactaa
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