KEGG   Pieris rapae (cabbage white): 111003676
Entry
111003676         CDS       T05162                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111003676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:prap03041]
    111003676
   04121 Ubiquitin system [BR:prap04121]
    111003676
Spliceosome [BR:prap03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    111003676
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    111003676
Ubiquitin system [BR:prap04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111003676
SSDB
Motif
Pfam: SART-1 HIND DUF6924
Other DBs
NCBI-GeneID: 111003676
NCBI-ProteinID: XP_045485427
LinkDB
Position
9:7070148..7078854
AA seq 741 aa
MGSKKHKKESKKKKHRSRSRSPLEGEERERKRHRKHKDRKKDRSPDVEEVPVDSHLQPKE
VPRSKSRSSSVEAVKSYDDKPSEKKRKLEKSKSPVAPPASAQESLSIEDTNKLRAKLGLK
PLEVAEKPADDGMLKDDLGEFYHKPAPNISQQKKSDKIREKLEERKEKRKLETKLKTNLI
ADVSDDEDALAWINKSRQMDKQKKEAEKRAAMLDEMDQVFGVGALVAEQQLEERQNTYTD
RHLRGLRVAHDIEQLPEERETILTLADKDVLAEDNEDVLVNVNVLDDERYKKNIEERRKA
AAGYQAYDEESELAAALGYNKPMLSKYDETINPEHKARSAGFHLGDEAALEAGRYREMMR
AERLAGGPDKRLESLQLPALRIASDYMDEAEISTKFKKFKKKGKIRKKPKHEPIDVDDYE
AGNAPLETDDTDVKVETLEPVMDEEEVEVDGELQSAVARARRLRLAERQEPVLPKVEEIL
ENVKKEESEDEDAEGGSRMVLDSTAEFCRTLGDIPTYGLAGNRDSTTEIMDFEQEELETE
AELEGGSGAWSRVELGSEAPAELVAGSSVGLGAEPALGTGVAGALQVALSKGYLERAGAA
PAPRSRLNHLLQAHHYSIEDKTYGEDDKYSRRERGHHGGGAPSEFREKNNFRPNIKLEYV
DDDGHALCPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLGTLHMLQ
QKQKETHSPYIVLSGAKRDKN
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggggtctaaaaaacataaaaaggagtctaaaaaaaagaagcataggagtaggtcccga
tcgccattggagggcgaggagcgtgaacgtaaacgccacagaaaacacaaagaccgcaaa
aaggatcgttctcccgatgtggaggaagtcccggttgactcacatttacaaccaaaagag
gttccaagatcaaaaagtcgcagtagcagtgttgaagctgtcaagtcctatgatgataaa
ccaagtgagaaaaagcgcaaactggagaagtctaaatcacccgttgccccacctgcttcc
gctcaggagagcctctccattgaagacacaaataagttgagagctaagttgggcctgaaa
cctcttgaagttgctgaaaaaccagcggacgatggaatgttaaaagatgatttgggtgaa
ttctatcataagcctgcacctaacatatcacaacagaaaaagtccgacaaaatacgcgaa
aaacttgaagaacgcaaagaaaaaaggaaattggagacaaaattaaaaacaaatctcatt
gcggacgtttctgacgatgaagatgcgttggcatggatcaacaagtcacgacaaatggat
aaacagaagaaagaggcggaaaagcgggctgcgatgctggatgagatggatcaggtgttc
ggtgtaggcgcactggtagcggagcagcagctggaagaacgacaaaacacctataccgac
cgtcatttacggggacttcgtgtcgcacacgatatagaacagctgcctgaggagcgcgag
accatcctgactttggcggacaaggacgtgctggccgaagacaacgaggacgtactcgtc
aatgtcaacgtactggacgatgagcgttacaaaaagaacatcgaagagcgtcgcaaggcc
gcggcaggataccaagcgtatgacgaggagagcgaattggctgcggcgttgggttacaat
aagccgatgttgtccaagtatgacgaaacaattaatcctgaacataaggcgcggtctgcc
ggattccaccttggagacgaggccgcactcgaagctggccggtaccgggaaatgatgagg
gcggaacgcctggcaggaggacccgataagcgcctggagtcacttcagctgccagctctg
cgtatcgcttctgactacatggatgaagctgagatcagtaccaagtttaagaagttcaaa
aagaagggcaagatccgtaaaaagccgaagcatgaaccaattgacgtggatgactatgag
gcgggcaacgcgccgctcgaaactgacgatacagatgtaaaggtggagacacttgaacct
gtgatggatgaggaggaggtggaagtggacggtgaactgcagagcgccgtggcacgggct
aggagactcaggctagcagagagacaggaacctgtcttgcccaaggtggaagaaatacta
gagaatgttaagaaagaagagtctgaagacgaagatgccgaaggcggtagtcgtatggtg
ttagactccacggctgagttctgccgaactcttggagatatacccacatatggacttgcc
ggaaaccgggactctactactgaaataatggacttcgagcaagaagaactcgagacggaa
gcagaattggagggtggttctggcgcatggagccgtgtggaattaggaagcgaggcgcca
gcggaattagtagcgggttcctcggtgggattgggggcggaaccagcgttgggcacgggc
gtagcgggagcgttgcaggtggctctgagtaagggatacctggagagggcaggtgctgcc
ccagcgccgcgatcccgcctcaatcatttgttgcaggcccatcactactctatagaggat
aagacatatggagaggatgacaagtacagtagacgtgagcgcggtcatcacggcggtggt
gcccccagcgaatttagggagaaaaacaatttccggcccaacatcaagttggagtacgtc
gatgacgatggccacgccctttgccctaaagaggcgtttcggtacctctcgcataagttc
cacggcaaagggcctggaaagaacaaacaggagaagcgcatcaagaaggccgtacaggag
gggcttatgaagaagatgagctcaacagacacgccactgggtacgttgcacatgctgcag
caaaagcagaaagagactcactcgccatacatcgttcttagcggcgccaagagggacaaa
aactaa

DBGET integrated database retrieval system