Pieris rapae (cabbage white): 111003928
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Entry
111003928 CDS
T05162
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03013
Nucleocytoplasmic transport
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111003928
03015 mRNA surveillance pathway
111003928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111003928
03041 Spliceosome [BR:
prap03041
]
111003928
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111003928
Spliceosome [BR:
prap03041
]
Complex C
Other components
EJC/TREX
111003928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Rb_C
HTH_63
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
111003928
NCBI-ProteinID:
XP_022130384
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All DBs
Position
11:10450533..10453119
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AA seq
395 aa
AA seq
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MGTEVALSFNSLRTQLENERSSLYKIDENIKKIVQTTGRFSNNRYNASGDNSRGQRQPNR
NYHNTDVNKNDDVFKRKHETKTVFSRISAKTADSDGEDEASGPKRSRVSSAVCRELPTRA
AVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEDKKAQVERKIEELARLEKE
RELKERKVLFAERELKKATIKALEAKVARVQEFEKWELSQSNLGNFILTKAKPHIYWLPN
LNKMSEKVQEKLKSSQRYHEKCMSKKRQELEEELQKIEQRCLRQKAPRAKENNPEANDHA
SNINPEEAENGNKKRDKFAMDADEKEDSDGEEHPEEKELDQKTEIKNYLDKDTELNEAII
EHQDNVKDVELEVTTVNNTHEDINTNATETYDKSI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagaagtggctttatcatttaactctttacgtacacaattagaaaatgaaaga
agtagtttgtataaaattgatgaaaatataaaaaaaatagtgcaaactacgggtcgattt
tccaataataggtataatgcttctggtgacaactctagagggcaaagacagccaaaccgg
aattatcacaatacagatgtgaataaaaatgatgatgtatttaaacgtaaacatgaaaca
aaaactgtttttagcaggatatcagcaaaaactgcagatagtgatggagaagatgaggca
tctggtcctaaacggtctagagtttcttcggcggtatgccgagaactaccaacaagagcg
gctgtgcttagagctcaaggtgatgatgagcaagctaggactaggaatagaaggatattt
ggttccttacttggaacccttcagaagtttaaacaagaagaaatagtcttgcagactaaa
gaggacaaaaaagcccaagttgaaagaaaaattgaggaactagctcgcttagaaaaagaa
agggagttgaaagagcgtaaggtattgtttgctgaacgtgaactcaaaaaagccactatt
aaagctttagaggccaaagtggcacgtgttcaagagttcgagaaatgggaactatcacag
agtaatcttggaaactttatactgactaaagctaagcctcatatctactggctgcctaat
ctaaataaaatgtctgaaaaggttcaagaaaagttaaaatcaagccagcgttatcatgaa
aaatgcatgtctaaaaagcgtcaagagctagaagaagagttgcagaaaatagaacagagg
tgcttacgacaaaaggcaccaagggccaaggaaaacaatcctgaggccaatgatcatgca
tctaacatcaatcctgaagaggctgaaaatggtaataagaagagagataagtttgctatg
gatgctgatgagaaagaagacagtgatggagaggaacatccagaggaaaaagaattagac
cagaaaacagaaataaaaaattatttggacaaagatacagaactgaatgaagctataata
gaacatcaagataatgttaaagatgttgaattagaagttacaacagtaaataacactcat
gaagacatcaataccaatgcaactgaaacatatgacaaatctatttaa
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