KEGG   Pieris rapae (cabbage white): 111003928
Entry
111003928         CDS       T05162                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03013  Nucleocytoplasmic transport
prap03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111003928
   03015 mRNA surveillance pathway
    111003928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prap03019]
    111003928
   03041 Spliceosome [BR:prap03041]
    111003928
Messenger RNA biogenesis [BR:prap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111003928
Spliceosome [BR:prap03041]
 Complex C
  Other components
   EJC/TREX
    111003928
SSDB
Motif
Pfam: Pinin_SDK_memA Pinin_SDK_N Rb_C HTH_63 FlaC_arch
Other DBs
NCBI-GeneID: 111003928
NCBI-ProteinID: XP_022130384
LinkDB
Position
11:10450533..10453119
AA seq 395 aa
MGTEVALSFNSLRTQLENERSSLYKIDENIKKIVQTTGRFSNNRYNASGDNSRGQRQPNR
NYHNTDVNKNDDVFKRKHETKTVFSRISAKTADSDGEDEASGPKRSRVSSAVCRELPTRA
AVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEDKKAQVERKIEELARLEKE
RELKERKVLFAERELKKATIKALEAKVARVQEFEKWELSQSNLGNFILTKAKPHIYWLPN
LNKMSEKVQEKLKSSQRYHEKCMSKKRQELEEELQKIEQRCLRQKAPRAKENNPEANDHA
SNINPEEAENGNKKRDKFAMDADEKEDSDGEEHPEEKELDQKTEIKNYLDKDTELNEAII
EHQDNVKDVELEVTTVNNTHEDINTNATETYDKSI
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgggaacagaagtggctttatcatttaactctttacgtacacaattagaaaatgaaaga
agtagtttgtataaaattgatgaaaatataaaaaaaatagtgcaaactacgggtcgattt
tccaataataggtataatgcttctggtgacaactctagagggcaaagacagccaaaccgg
aattatcacaatacagatgtgaataaaaatgatgatgtatttaaacgtaaacatgaaaca
aaaactgtttttagcaggatatcagcaaaaactgcagatagtgatggagaagatgaggca
tctggtcctaaacggtctagagtttcttcggcggtatgccgagaactaccaacaagagcg
gctgtgcttagagctcaaggtgatgatgagcaagctaggactaggaatagaaggatattt
ggttccttacttggaacccttcagaagtttaaacaagaagaaatagtcttgcagactaaa
gaggacaaaaaagcccaagttgaaagaaaaattgaggaactagctcgcttagaaaaagaa
agggagttgaaagagcgtaaggtattgtttgctgaacgtgaactcaaaaaagccactatt
aaagctttagaggccaaagtggcacgtgttcaagagttcgagaaatgggaactatcacag
agtaatcttggaaactttatactgactaaagctaagcctcatatctactggctgcctaat
ctaaataaaatgtctgaaaaggttcaagaaaagttaaaatcaagccagcgttatcatgaa
aaatgcatgtctaaaaagcgtcaagagctagaagaagagttgcagaaaatagaacagagg
tgcttacgacaaaaggcaccaagggccaaggaaaacaatcctgaggccaatgatcatgca
tctaacatcaatcctgaagaggctgaaaatggtaataagaagagagataagtttgctatg
gatgctgatgagaaagaagacagtgatggagaggaacatccagaggaaaaagaattagac
cagaaaacagaaataaaaaattatttggacaaagatacagaactgaatgaagctataata
gaacatcaagataatgttaaagatgttgaattagaagttacaacagtaaataacactcat
gaagacatcaataccaatgcaactgaaacatatgacaaatctatttaa

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