Pieris rapae (cabbage white): 111003936 Help Entry 111003936         CDS       T05162                                  Name (RefSeq) 5'-3' exoribonuclease 2 homolog   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism prap  Pieris rapae (cabbage white) Pathway prap03008   Ribosome biogenesis in eukaryotes prap03018   RNA degradation Brite KEGG Orthology (KO) [BR:prap00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     111003936   09123 Folding, sorting and degradation    03018 RNA degradation     111003936  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:prap03021]     111003936    03019 Messenger RNA biogenesis [BR:prap03019]     111003936    03009 Ribosome biogenesis [BR:prap03009]     111003936    03016 Transfer RNA biogenesis [BR:prap03016]     111003936 Transcription machinery [BR:prap03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      111003936 Messenger RNA biogenesis [BR:prap03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      111003936 Ribosome biogenesis [BR:prap03009]  Eukaryotic type   Pre-60S particles    RNases     111003936 Transfer RNA biogenesis [BR:prap03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     111003936 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_M XRN_N zf-CCHC_4 Motif Other DBs NCBI-GeneID:  111003936 NCBI-ProteinID:  XP_045485992 LinkDB All DBs Position 11:complement(10173298..10191928) Genome browser AA seq 961 aa AA seqDB search MGVPAFFRWLSRKYPSVIVECIEQRPVDVDGQLVYVDSSLPNPNGLEFDNLYLDMNGIIH PCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR ASKETQEKIEEIARIRSELEVKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIH DRLNSDPGWKGIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGSSPDAALVRSDPAFGNQDSFI FVRLNVLREYLEKELQMPNLPFPYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR LVNLYKKCVYKTKGWITDSGDVNLDRVQVIMDELGRVEDEIFKRRHQNEVSFKAREKAKK QQKINFQLLEDTQFAPTALGGGPKTVQNARQEAAEIRRAGMQAVANREQEESGRSRKRSA AQAGLDDDDDKHDEVRLWEEGFKERYYESKFEVDKNNLEFRYRVALQYVRGLCWVLRYYY QGCASWKWYFPYHYAPFASDFVNISGLSTKFEKGTKPFRPLEQLMGVFPAASSQHVPQPW AKLMSDPSSPIIDFYPIDFKIDLNGKKFAWQGVALLPFVDEARLFKALEPYYEDLSQAEI KRNIRGHDRLYVSTGNQSYEFLLGLYQAAGAELKKLIESNQRYPFRSEGVRGDVLLSADN VIIGGQLSSPVVGLSPVLDNRVLCVRYQDPDYPEEFIFPARRLRGATEPPRVLKPGDLSQ QENRNWRPQIGMVRSHTVANLEMAGHRMLGHHLPRDNTYSSVPPPQHNRSQSFGPRRGGY VPHQEFNNPGYGRSGYQSNRGNQERSDNQERFGNQERSGNQGRFGNQERFGNQERFGHQD RSNSQNRYGNNQGYSSHQNPRFNNSNQGYSSKNQNQRGGNQNQGGWRPHGPNRYQGNSSW R NT seq 2886 nt NT seq  +upstreamnt  +downstreamnt atgggagttccagcattctttcgatggcttagccgcaaatatcctagtgttattgtcgaa tgtattgaacagaggccagtcgatgtagatggccagttagtctatgtggactcatcactt ccaaacccaaatggtttggagtttgacaacctttacttggatatgaatggtattattcat ccttgtacccatcccgaagataagcctccccctaaagatgaagatgagatgatggtagca atttttgaatgtattgaccgcctttttcgtattgtacgacctaggaaggttttgtacatg gctattgatggtgttgcaccaagggctaaaatgaaccagcaaaggtcccgtaggttcaga gcttcaaaggaaacgcaagaaaaaattgaagaaatagctcgcattcgctcagagctggaa gttaagggtgcctatctacctcctgaaaggcccaaagaggcccattttgactcaaactgt atcaccccagggaccccattcatggacagactcagcaaatgcttacattattatattcat gacaggttaaacagtgaccccggatggaaaggaatcaaagttattttatctgatgctaat gtccccggtgaaggggaacacaaaattatggactacattcgcagacagagagctcaacca gaccatgatccaaacacacagcatgtgttatgtggcgctgatgctgaccttattatgtta ggactggcaacacatgaacctaattttaccatcataagggaagaatttaagccgaacaaa cctaggccttgtgatgtatgtggacaacttggccatgaaatgaaagaatgcacgggcagt agtcctgatgctgcattagtaagatctgatccagcatttggaaatcaagacagcttcata tttgtgaggctgaatgttctaagagaatatttagaaaaggaattgcaaatgccaaactta ccctttccatatgactttgagcgagctttagatgactgggtgtttatgtgtttcttcgtg ggaaacgactttttaccgcatttacccagccttgagatcagagaaggggcggtagatcga cttgtcaacttgtataagaagtgcgtttacaaaactaagggctggataacggattcggga gatgtaaacctagacagagttcaagttataatggacgagctgggacgagtcgaagacgag atcttcaaacgccggcatcaaaatgaagttagcttcaaggcccgggaaaaggccaaaaaa cagcagaaaattaactttcaattgcttgaggatacgcaatttgcgcctacggccctggga ggtggacccaaaacggtacaaaacgcgcgtcaagaggccgctgagattcgtcgagcggga atgcaagctgttgccaatagggaacaagaagagtcaggccggtcgcgcaagcgcagtgcc gcccaggccggtctcgatgatgacgatgacaaacacgacgaggttcggctctgggaagaa ggcttcaaggagagatactatgagagcaagtttgaggtggacaagaataacttggagttt aggtaccgggtagcgctacaatacgtccgcggcctctgctgggtgcttcgctactactac cagggctgcgcttcatggaagtggtacttcccgtaccactacgccccgttcgcttcggac tttgtcaatattagcggactcagtaccaaattcgagaagggaacgaagccgttccgacct ctggagcagctcatgggcgtgttcccagctgccagttcacaacacgtgcctcagccgtgg gccaagctcatgagcgatccgtcgtcaccgataatagacttctacccgatcgactttaag atagacttgaacgggaagaagttcgcgtggcaaggagtcgccttgctgcctttcgtggat gaggcgagactcttcaaggctctggagccctattacgaggatctgtcgcaggctgaaatt aaaagaaacattcgcggtcacgaccgcctatacgtatcaacgggtaaccaaagctatgag tttttgctgggtttgtaccaggcggctggggcggagttgaaaaagcttatagagagcaat cagcgctatccttttagaagtgagggtgtgcgtggtgatgtactgctgagtgctgataat gtcattattggcgggcaactatcgtctcccgtggtgggcctttcccctgtcctggataac cgggtgttatgcgtccggtaccaagacccagattacccggaagagttcatcttccctgct cgccgtctccggggtgctacggaaccccccagggtactaaaaccaggggatctgtcgcag caggagaatcgcaactggaggccgcaaattggtatggtaaggtcacacacagtagccaat ctggagatggctggacataggatgctgggacatcatctgcccagagataacacctactca tcagtacctcctccacagcataatcgttctcaatcgtttggaccacggcgcggcggttat gtaccacaccaggaatttaacaacccaggatacggccgatctggttaccagtcaaataga ggtaatcaagagaggtccgacaaccaagagaggttcggtaatcaagagaggtccggcaat caagggaggttcggcaatcaagagaggttcggtaatcaagaaagatttggtcatcaagac agatccaatagtcaaaatcggtacggcaacaatcaaggttactcaagccatcaaaaccca aggtttaataacagtaaccaggggtattcctcgaaaaaccagaatcaaagaggtggaaac cagaatcagggtggttggagacctcacggacccaatcggtatcaaggaaattctagttgg cgttga

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