Pieris rapae (cabbage white): 111003974
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Entry
111003974 CDS
T05162
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
prap
Pieris rapae (cabbage white)
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prap03016
]
111003974
Transfer RNA biogenesis [BR:
prap03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
111003974
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111003974
NCBI-ProteinID:
XP_045484164
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Position
5:complement(6428312..6434255)
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AA seq
1269 aa
AA seq
DB search
MRNLQLWRSSARKLEYLTEEISCACYGRHGACPAGELFLCTHNLIVRCFSNNGRLKWSKD
LSEISSLRNSPVNAAYLSLVNTLSIGLSNGEIFGMTETGANLELKGICEDGILAFEWSHD
QESLALVTKDYRVIVMSCTYDVVNQVELLTEEFGAKEFITVGWGKKETQFHGSEGKHAAK
AKSDFFVDKHALINNQVLISWKYHGSLFAVGFTMEGIRRFKVFDRGGKLLYTSERQQGLE
ANLGWRPSGNTIATTQTLKDKYVVTFFEKNGLKHGEFEIPVIENIEVQKVLWSQDSEILT
LVCKELKDRTPKVLLFTSSNYHWYLKQTLTFSGHSKISQIMWDNGFDTSNNKTLHILFKN
GCYYTYSWVWDVDHSTGKCIKDDAVVSVIDGKKLLVSSFRQSVVPPPMANLEMETDTYID
SVQFLLEPSDDSDFNSFFISSGNMLTFYQQIQKKPLKYEVTKTICLNKYEFPFQYYNWYW
WKQNVLAVIKLDNDSNYKLLLFTILENGLEEIYSKNLPAAVVRIHSHPLIPKLYLHLETG
KVMEYNSEGLEELAESFPVACPKFCVLPIGDLGYFVGLTHKGLLYLQDRVIMNNVASIFV
HTDYFLITSLKNFMLCTKLTQDGLGAVIDYDDTESPDVYKRRVECGSKIVVVVPNDTRTV
LQMPRGNLEVIEPRPLSLKIVGEYLNSLKYYEAFDLMRKQRINLNLIYDHNPQRFVNNID
KFLEIINNNLWLSLFLTDLENKDITKTMYATSYICCKENKDCDKKVDFICDLVRERLNSG
TDKLARVLPLLTTFVKKNTIQDLESALIIIKDLKNLELNGSKLPVSSDEALKYLLYIVDV
NKLFDVALGMYDFDLVLLVANKSQKDPKEYIPMLNELNAMDENYKRFTINKNLKRYLLAV
DSLIKCGPSKHEELKTFVKYHSLYRDALKMLTPGDYIYKQICDDFGAYLKLKKQYLESGM
MFERADNIEKALECYKEVMEWELAIKLVQHLPKDEFKEICWDFVEALKQEKRHSEALRIL
EMLGDNEIEILKFAVENGEFKSAIRLCYSFDLHTFLETDVKPAVIEEFNSLKDLLDTNLT
NFKNYRDRLQVVRENKSKAPPRNEHIPYYNRDYDLYSDIGSTIGSSTGSSRSYRSSKNRR
KHERKVASLKEGSQYEDTALIMALHSLVTATFELRPLVREINLALCSLYKDEEAKMLQYL
LDRVLQEMKDSFKQIWTHNFVIEATNAVIAAEQNVPEGGSIIRQGIATLEPSVRIAPVIQ
DVHWKLDLD
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgcggaatttacaactttggaggagttccgcgagaaaacttgaatatttaactgaagaa
atatcatgcgcctgctatggtcgtcatggagcatgtcctgctggagaattatttttgtgc
acacataaccttattgtccgatgttttagtaataatggaaggttaaaatggtctaaagac
ctttctgagatatcttcgcttcgtaactcgccagtcaatgcagcttatctgagtttggta
aacaccctcagtattgggctatcaaatggggaaatatttggaatgactgaaactggtgct
aatcttgaattaaagggtatctgtgaagatgggatcttggcatttgaatggagtcacgat
caagagtcgttggcattagtaacaaaagactacagggttatagtaatgtcatgcacatac
gacgtagtgaatcaagtggaactgctaacagaagaatttggtgcaaaagaatttataact
gttggatggggaaagaaggaaactcaatttcatggctcagaaggcaaacatgcagcaaaa
gccaaaagtgacttctttgttgataaacatgcattgattaataaccaagtattaatatct
tggaaatatcatggaagcttgtttgctgttggatttacaatggaaggaataagacgtttt
aaagtttttgatcgtggaggaaagttgctctacaccagtgagagacagcagggtcttgaa
gcaaacttgggatggcgtcctagtggcaacactattgcaacaacacagacactcaaagac
aaatatgttgttacattctttgaaaaaaatggcttaaaacatggagaatttgaaatacct
gtaattgaaaatatagaagttcaaaaagttttgtggagccaagattcagagattttgact
ttagtttgcaaggaattaaaggatcgtactcctaaagttttattattcacaagtagcaac
tatcactggtaccttaagcaaacacttacatttagtggtcatagtaaaataagccagatt
atgtgggataatggttttgatacttcaaataacaaaacactacatattctgttcaaaaat
ggatgttattatacatattcatgggtttgggatgttgaccacagtactggaaaatgtata
aaagatgatgcagtagtttcagttattgatggaaaaaaattattagtctcttcattccgt
caatcagtagtaccaccccctatggcaaatttagaaatggagacagatacttatatagat
tcagtgcagtttctcttggaacctagtgatgattctgacttcaactctttttttattagt
tctggcaacatgttgacattctaccaacaaattcagaagaagccactcaagtatgaagtt
actaaaactatatgtttaaataaatatgaatttccatttcaatattataattggtactgg
tggaaacaaaatgttttagctgttattaaattggataatgacagtaattataaattgtta
ttgtttacaatattggaaaatggattagaagagatttattctaaaaacttacctgcagct
gttgtacgaattcattcccatccactgatacctaagctataccttcatcttgaaactgga
aaagttatggaatataattctgaaggcttagaggaactagctgaatcattcccagttgca
tgtccaaaattctgtgttttacccattggagatctaggctactttgtaggtctaacacat
aaggggcttttatatcttcaggacagagttataatgaacaatgttgcatcaatctttgtt
cacactgattactttctcattacatcattaaaaaattttatgctttgcaccaaactgact
caagatggattgggagcagtaattgattatgacgatacagaatctcctgatgtttataaa
agaagagtagaatgcgggtcaaaaattgttgtagtggtccctaatgacacaaggacagtg
ctacaaatgcctcgtggtaacctggaagttatagaacctagacccctctcacttaaaatt
gttggtgaatatttgaattcacttaagtactatgaagcatttgatttgatgaggaagcaa
agaattaatctcaatttaatatatgatcataatcctcaacgctttgtcaataatattgat
aaatttttggaaataataaataataacttgtggctcagcctctttctgacagacctagaa
aacaaagatattaccaaaactatgtatgcaactagctacatctgttgtaaggagaataag
gactgtgacaaaaaagtggatttcatttgtgatcttgtaagagagcggcttaattcagga
acagacaaattagctagagtgctacctttgctaaccacatttgttaaaaagaatacaata
caagacttagaaagtgcactcatcattattaaagacctcaaaaacctagaacttaatggt
tctaaacttcctgtatcttcagatgaagctctaaagtacctactttatattgttgatgtt
aataagttgtttgatgttgccctaggaatgtatgattttgatctggtgctattagtagcc
aataaatctcaaaaggatcccaaagaatacatacctatgctaaatgaattgaatgccatg
gatgagaactacaaaaggtttaccattaacaaaaatttaaaaaggtatctcttagctgtt
gatagtctgattaaatgtggtccaagcaaacatgaagaattaaaaacatttgtaaaatac
catagtttgtacagagatgcattgaaaatgttaacaccaggtgattatatttataaacag
atttgtgatgattttggtgcatatttaaagttaaaaaaacaatacctagaatctggcatg
atgtttgaaagggctgataatatagaaaaggctttagaatgttacaaagaagttatggaa
tgggaattggctataaaattggtacaacacttacctaaggatgaattcaaagaaatatgt
tgggattttgttgaagctctgaagcaagaaaagcgtcatagtgaagctttaaggattcta
gagatgctaggtgataatgaaatagaaattttaaagtttgctgtggaaaatggagaattt
aagtctgctattcgactgtgttatagctttgacttgcacacattcttagagacagatgta
aaaccagcagttatagaagagtttaacagtttgaaggatctattagatacaaatttgaca
aatttcaagaactatagagatcgcttacaagttgttcgggaaaataaatccaaagctcca
cccaggaatgaacatattccctactataatcgtgactatgacttatattctgacattgga
agtactattggctcttctactggatcgagccgctcctaccgctcaagcaagaaccgcagg
aaacatgaacggaaagttgcctcattgaaggaaggttcccaatatgaagacactgccttg
attatggccctacattcactagtcacagctacatttgaattacgacccttggtcagggaa
ataaacttagcactttgcagcttatataaggatgaagaagctaagatgctacagtacctc
ttagatagagtgctacaagaaatgaaagacagtttcaagcaaatttggacgcacaatttt
gtcatagaggcgacaaacgcagtaatagcagctgaacaaaatgttcccgaagggggcagc
attatacgccaagggattgcaactttagaaccaagtgtcagaatagctcctgttattcaa
gatgtccactggaaattggatttagactaa
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