Pieris rapae (cabbage white): 111003979
Help
Entry
111003979 CDS
T05162
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111003979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111003979
03032 DNA replication proteins [BR:
prap03032
]
111003979
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111003979
mRNA cycle factors
Common to processing body (P body) and stress granule
111003979
DNA replication proteins [BR:
prap03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111003979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
111003979
NCBI-ProteinID:
XP_022130464
LinkDB
All DBs
Position
5:complement(6420992..6425131)
Genome browser
AA seq
959 aa
AA seq
DB search
MKNDCNDNLVIKNVERSEQAKKVYRYVTDVARRLGEATSASKEIADLFSIHIEVQRQKLR
DNCEKLFFLDPLNYGKKSVELVWRKVYYDTIYCAKKLHETHHDCDNYLDMHIVSGIGHFH
NFIARVQAEMKVNLKGLDYAPSYNDEEYQDDLNVMLIEHNSHILYQSILYSCLIYLGDLS
RYQVEIFNKSGASIAARYYLQAAQLDLTSGMPFNQLANLYLEKNYNLDSVSSYIHCLSCL
TPFEGALGNLNKIFEKNNQFCCMVTPSETLTQSEHIQITVANFLSLIEKWYFLKDDENIP
KLCSNVVQQLKLSMGFTKVHLPDINKNYNDYMQAIEEEYANPAYLNSTMIHHIVKICLFT
IAKMKENDEAKSFACKAFTLAFLSQTLQKLHNQLENLGFKNPANNYIPKYKLNQSEKTVN
ELENIESQDTQEVCSLPNGCEDTNYENIKETGSDDDKEVFINGDGKNKKNIPRRRRRRRA
NSLDSSDLSDNSESSSEETDQTCSDDEDAISDSTYVSDEDNSDSSDLEKKVEEKVNGSHE
NTTNLVDNSESTNKIASENTVNSNALDSEGISNFLHGDNILPSLKLLQDWVLTEKDLILS
CGESGESLFQCVVNLLNIFQHYFYKNNDLLSKNSNILIQAKNKAKKFRLDYKTIPLPEDI
NLRGTNIGKFDKDAAEWQLKEKLKLTEFDENIIRILNFIYFGNQIAKIVPRIKFNKTMKI
FYLKKVYPPKTTHKLNHKRSREWHSSNKQGDKNEGGLLRRLGHLWLTSRVRELECTGQTE
VPSLLAVDTTALYKHLRRVKQLVRTRNFIVLIPSIVLQELDELKRDCSAARDAIRWLEMQ
LKSGSRFLRTQRPGQSKPMPLIKYPRKAPSFVHNFMQILEFCNHFNDEKQQGGNGDSEIS
GKSAPLLVLLVGTEQGKNEEQYKEFSLLGTAQAAGISIEFIGDFYAKWRQTSHKNGKKR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgactgcaatgataatttggtgataaaaaatgtcgagcgcagcgaacaagca
aagaaagtatatcggtatgtaactgatgttgctcgacgacttggtgaagcaacctcagcc
agtaaagaaatcgcggatttatttagcatccacatagaagtccaacggcagaagcttaga
gacaattgtgaaaaacttttctttttagatcccttgaattatggaaaaaaatcagtggaa
ttagtctggcgaaaagtatactatgatacaatatattgtgcaaaaaagctgcatgaaacc
caccatgattgtgacaactatttagacatgcatatagtctctggtattggccacttccat
aattttattgcaagagtccaggcagaaatgaaggttaatttaaaaggtctggattatgcc
ccttcttataatgatgaggaatatcaagatgatttgaatgtaatgcttattgaacacaat
agtcacattctttatcagtcaatattgtactcatgcttaatatacctgggtgatttaagt
agatatcaagtagaaatttttaataaaagtggggcatctattgcagctcgttattatctt
caagctgctcaattagacctaacttcaggcatgccatttaaccaacttgccaatttatat
ttagaaaagaactataatttggattctgtcagttcttatatccactgcctaagttgttta
acaccttttgagggagcactgggtaatttaaacaaaatctttgaaaaaaataaccagttc
tgttgcatggtaacaccatctgaaactttgacacagtctgaacatattcaaattacagta
gcaaattttttatcattaattgaaaagtggtactttcttaaagatgatgaaaatatacca
aagctttgtagcaatgttgtgcaacagcttaaactatcaatgggttttacaaaagttcat
cttcctgatataaataaaaattataatgattacatgcaagcaatagaagaagaatatgcc
aatccagcttatctcaactctacaatgatacatcatattgttaaaatatgcctttttact
atagctaagatgaaagaaaatgatgaagccaaatcatttgcatgtaaagcatttacttta
gcatttttatctcagactttacaaaaattgcataaccaattagaaaacttgggatttaaa
aacccagccaataattacataccaaaatataaattaaatcaatcagaaaaaactgtgaat
gagttggagaatatagaaagtcaggatacccaggaagtatgttcattgccaaatggatgt
gaagatactaactatgaaaacataaaagaaactggctctgatgatgacaaagaagttttc
attaatggagatggcaaaaataaaaaaaatataccaaggaggaggcgtagacgtagagca
aattcattagacagttctgatttaagtgataattctgagagcagttcagaagaaactgac
caaacatgctctgatgatgaagatgcaatttctgactccacttatgtatctgatgaagat
aatagtgatagttcagatttagagaaaaaagttgaagagaaagtaaatggttctcacgaa
aatacaactaatcttgtggacaattctgaaagtactaacaaaattgcctcagaaaataca
gtaaatagtaatgctctagattcagaaggtataagcaactttttacatggtgacaatatc
ttgccaagtcttaaactactgcaagattgggtgcttactgaaaaagatcttatcctatca
tgtggagaaagtggagaatctttatttcaatgtgttgtaaacttattaaacatctttcaa
cactatttctataaaaataatgacctattaagcaaaaacagtaatattcttattcaagct
aaaaataaagctaaaaaatttaggctggattataaaacaatccctcttcctgaagatatt
aacttgcgtggaactaacattggaaaatttgacaaagacgcagctgagtggcaactcaag
gagaaattaaaattaacagagtttgacgaaaatataataagaatattaaacttcatttac
tttggtaatcagatagctaaaattgtgccaaggattaagtttaacaagacaatgaagatt
ttttacctgaaaaaagtatatccaccaaaaactacacacaaattaaatcataaaagaagt
agagaatggcatagctctaataaacaaggggataaaaacgagggtggacttcttcgccgt
ttaggccacctttggcttacatcgagagtaagagaattagagtgcacaggacaaaccgaa
gtaccatctcttctcgccgttgacacaactgctttgtataaacatctccgtcgagttaaa
cagctcgtcagaactcgtaacttcatagttctgatccctagtatcgtattgcaagaattg
gacgagcttaagcgagattgttcagccgctcgcgatgcaatacgctggctggagatgcaa
cttaagagtggttcacgatttcttagaacacaacgcccgggtcaatcgaaaccaatgcca
ctgatcaaatacccaagaaaagcaccatctttcgtacataattttatgcagattttagaa
ttttgcaatcactttaatgacgaaaagcaacaaggagggaatggtgattcggaaatctct
ggaaagtctgctccattgcttgttctactagtcggtactgaacaaggaaagaatgaagaa
caatataaggaatttagcctgttgggaacggcacaggcagcgggcatttctatcgagttt
attggtgacttttatgcgaaatggcgtcagacaagtcataaaaatggtaaaaagagatga
DBGET
integrated database retrieval system
