KEGG   Pieris rapae (cabbage white): 111003983
Entry
111003983         CDS       T05162                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
prap  Pieris rapae (cabbage white)
Pathway
prap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111003983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prap03019]
    111003983
Messenger RNA biogenesis [BR:prap03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     111003983
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C NBCH_WD40 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 Ge1_WD40 WD40_RFWD3 Cytochrom_D1 WD40_like Beta-prop_Nup120_160 RMC1_N WD_LRWD1 Beta-prop_RIG_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WDR54 VPS8_N Nbas_N Beta-prop_VPS8 PQQ_2 Lactonase
Other DBs
NCBI-GeneID: 111003983
NCBI-ProteinID: XP_022130469
LinkDB
Position
5:6273599..6275617
AA seq 327 aa
MSITTLYYVQLKKENAHDDSIWCCGWSNIKPEKKMDEENNGHSQDSNPEQEEPKSYIITG
GLDDMVKIWQLIDGKLEVKHQLDGHSLGVISVAVSPDGKTLASSSQDASLILWDIETGEK
LKTMETGVTDVWTLDFSPDGKNVVSGSNAGKILIFSVETGKLEQTLDTRGKFTLSVAYSP
DGKYIASGALDGIVKIFDVAQGKLVHTLEGHAKPIRSLCFSPDSQLLLTASDDGHMKLYD
AVHANLAGTLSGHASWVLSVAFSPDGKRFVSGSSDRTVRVWDLDTMQCQHVFKEHVDQVW
GVRFNAESNKIVSVSEDKSINIYDCPL
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtccattacgaccctatattatgtacaattaaaaaaagaaaatgctcacgacgattca
atatggtgttgtggatggagtaatattaaaccagaaaagaaaatggacgaggaaaataat
ggacattcgcaggattccaatccagaacaagaggagccaaaaagctatattataactgga
ggcctggatgatatggtaaagatttggcagctaattgatggaaaactagaagtaaagcat
caacttgatggtcattctttaggtgtaatatcagtagctgtaagccctgatggcaaaacc
cttgctagtagttctcaagatgcatctttgatattatgggatattgaaactggtgagaaa
ttaaaaactatggagactggagtaacagatgtatggactttagatttttctcctgatgga
aagaatgttgtatcaggaagcaatgctggaaaaattctaatattttcagttgaaactggt
aaattagaacagacattagatactaggggtaaatttacattgagtgttgcatatagtcct
gatggtaaatacattgcaagtggtgctttagatggaattgtaaaaatatttgatgtagca
cagggtaaattagttcatacattagaaggacatgcaaagcccataagaagtttgtgcttc
tcacctgattctcaactgctattaactgcatctgatgatggacatatgaaactctatgac
gcagtacatgccaacttagcagggactttgtcaggccatgcctcatgggtgctatctgtt
gctttttcaccagacggtaaaagatttgtgtctggcagttctgatagaactgtacgagtt
tgggatttagatactatgcagtgccaacatgtattcaaagaacatgttgatcaggtctgg
ggagtaagatttaatgcagagagcaataaaatcgtttccgtttcagaagataaaagcata
aatatttatgactgtccattatag

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