Pieris rapae (cabbage white): 111003983
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Entry
111003983 CDS
T05162
Name
(RefSeq) WD repeat-containing protein 61
KO
K12602
WD repeat-containing protein 61
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111003983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111003983
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
111003983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SPT8
Ge1_WD40
WD40_RFWD3
Cytochrom_D1
WD40_like
Beta-prop_Nup120_160
RMC1_N
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
WDR54
VPS8_N
Nbas_N
Beta-prop_VPS8
PQQ_2
Lactonase
Motif
Other DBs
NCBI-GeneID:
111003983
NCBI-ProteinID:
XP_022130469
LinkDB
All DBs
Position
5:6273599..6275617
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AA seq
327 aa
AA seq
DB search
MSITTLYYVQLKKENAHDDSIWCCGWSNIKPEKKMDEENNGHSQDSNPEQEEPKSYIITG
GLDDMVKIWQLIDGKLEVKHQLDGHSLGVISVAVSPDGKTLASSSQDASLILWDIETGEK
LKTMETGVTDVWTLDFSPDGKNVVSGSNAGKILIFSVETGKLEQTLDTRGKFTLSVAYSP
DGKYIASGALDGIVKIFDVAQGKLVHTLEGHAKPIRSLCFSPDSQLLLTASDDGHMKLYD
AVHANLAGTLSGHASWVLSVAFSPDGKRFVSGSSDRTVRVWDLDTMQCQHVFKEHVDQVW
GVRFNAESNKIVSVSEDKSINIYDCPL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtccattacgaccctatattatgtacaattaaaaaaagaaaatgctcacgacgattca
atatggtgttgtggatggagtaatattaaaccagaaaagaaaatggacgaggaaaataat
ggacattcgcaggattccaatccagaacaagaggagccaaaaagctatattataactgga
ggcctggatgatatggtaaagatttggcagctaattgatggaaaactagaagtaaagcat
caacttgatggtcattctttaggtgtaatatcagtagctgtaagccctgatggcaaaacc
cttgctagtagttctcaagatgcatctttgatattatgggatattgaaactggtgagaaa
ttaaaaactatggagactggagtaacagatgtatggactttagatttttctcctgatgga
aagaatgttgtatcaggaagcaatgctggaaaaattctaatattttcagttgaaactggt
aaattagaacagacattagatactaggggtaaatttacattgagtgttgcatatagtcct
gatggtaaatacattgcaagtggtgctttagatggaattgtaaaaatatttgatgtagca
cagggtaaattagttcatacattagaaggacatgcaaagcccataagaagtttgtgcttc
tcacctgattctcaactgctattaactgcatctgatgatggacatatgaaactctatgac
gcagtacatgccaacttagcagggactttgtcaggccatgcctcatgggtgctatctgtt
gctttttcaccagacggtaaaagatttgtgtctggcagttctgatagaactgtacgagtt
tgggatttagatactatgcagtgccaacatgtattcaaagaacatgttgatcaggtctgg
ggagtaagatttaatgcagagagcaataaaatcgtttccgtttcagaagataaaagcata
aatatttatgactgtccattatag
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