Pieris rapae (cabbage white): 111004060
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Entry
111004060 CDS
T05162
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap04145
Phagosome
prap04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111004060
09142 Cell motility
04814 Motor proteins
111004060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prap03036
]
111004060
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prap04812
]
111004060
Chromosome and associated proteins [BR:
prap03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
111004060
Cytoskeleton proteins [BR:
prap04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
111004060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Dynein_IC2
WD40_CDC20-Fz
WD40
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_SPT8
Glyco_transf_5
WD40_MABP1-WDR62_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
111004060
NCBI-ProteinID:
XP_022130574
LinkDB
All DBs
Position
2:390300..406850
Genome browser
AA seq
686 aa
AA seq
DB search
MSTTDRKLELERKKAKLQALRDEKDRRRREKEQKDAEEALHRASTASSLDSRRDLDEMLS
SLGVAPVKDVLSSLSSMTSLTPPQTASPDASLPHTDKSSIPHGTPKKPPQLQVVSVQSTD
IPPKENLTYAKQTQTTTSGVTELRDGYMEDWWRPRKAHAADYYDEYNLNPGLEWEDEFTV
LTFDGDTTRQGEDEEAAFHGKLPPGILPHGLPTVKEVQPAVTATPHEKKEEEKEKKVREL
SNDEKQTIMLSAEFQKFVSKAGRVIERALAEEVDIYTDYTGGGDNENAQDDKSAARLSLV
RTFYDERWSRGRCVTCVDWSAAHPELLLASYHNSDDAPHDPDGVCLIWNTKFKKTTPEDI
FHCQSPVMSATFAKFHQNLILGGTYSGQIVLWDNRVQKRTPIQRSPLSSLAHTHPVYCLS
VVGSQNAHNLISVSTDGRMCSWSLDMMSQPQETLDLQHRQSKAVAVTSMGFPHGDVNNFV
LGSEDGNVYTGCRHGQRAGVSECVEAHAGPVTAVSCHAAAGPLDLSHLYLTASMDWSVKL
WSLKENKPLYSFEDSGDYVSDARWSPVHPALFAAVDAHGRLDLWNLNRDTEVPIACITSQ
DGVAFNRVSWSPNGALLTAGDDAGKIWVYELAEQVYQPRHDEWTKLVYTLQELRNNQLDE
ETDRLSVTSGPPSLGSLTSLASNPLR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgacagaccgtaagttggaattagaacgtaagaaggctaagctccaggctctt
cgtgatgagaaagatcgtcgtcgcagagaaaaagagcagaaagatgctgaagaggctttg
cacagagcatccacagcttcaagcttggatagccgtcgggatcttgatgagatgctatca
tcacttggggtagctccagtgaaagatgtgctgtcatcactttcttcaatgacttcatta
acaccaccacagacagcctcacctgatgctagccttccacatactgataaatcaagcatt
ccacatggcacacctaagaaacctccacaactgcaagttgtatcagttcaatcaacagac
attcctccaaaagaaaatctaacatatgctaaacaaacacaaaccaccacatcgggagtc
actgaattgcgtgatggatacatggaggactggtggcggccacggaaagcccacgcggca
gactactacgacgagtacaatctaaacccgggtttagagtgggaggacgagttcacagtg
cttacattcgacggtgacaccacgcggcaaggcgaggatgaagaggcagcattccatgga
aaactcccgccgggcatcctgccccacgggctgcccacggttaaggaggtgcagccggct
gtcaccgccacgccgcacgagaagaaagaggaggaaaaggagaagaaagttcgggagttg
agcaacgacgagaagcagacgataatgctgtcagcggagttccagaagttcgtttctaaa
gcgggacgcgtcatcgaacgcgctttggccgaggaagtggacatttacactgactacacc
ggcggcggagacaacgaaaatgcgcaggacgacaaatctgcagcgcgtctctccttggtc
cgcactttctacgacgagcgttggtctcgcggccgctgcgtgacctgcgtcgactggtct
gccgcccaccccgaactcctcctggcctcgtaccacaacagcgacgatgcaccccacgac
ccagacggggtctgtctcatctggaacaccaagttcaagaagacgaccccagaggatatc
ttccactgccagtcgccggtcatgagcgcgacttttgcaaaattccatcaaaacctaatc
ctcggaggcacatattcgggtcagatagtgttgtgggataatcgcgtacaaaaaaggacc
cccatacaacgctcgccgctgtcttcgctcgcacatactcacccagtctactgcctctcg
gtggtgggaagtcagaacgcccacaacctgatctcggtgtcgacagacggtcgaatgtgc
tcctggtctttggacatgatgtctcagccccaggagaccctggacttgcagcacaggcag
agcaaagccgtggccgtcacctcgatgggattccctcacggggatgttaacaactttgta
ctgggaagtgaggacgggaatgtttacacgggatgtcgtcacgggcaacgtgccggcgtg
tcggagtgcgtggaggctcacgctggtcccgtcacggccgtctcgtgtcacgcagcggcc
ggaccgctcgatctctcgcacctctacctcaccgcttccatggactggagtgtcaagctg
tggagtctcaaggaaaacaaacctctgtactcattcgaggacagcggtgactacgtgtct
gacgcccgttggtcacccgtgcacccggctctgtttgcggccgtggacgcgcacggtcga
ctggatctctggaatctcaaccgggatactgaggtgccgatagcatgtatcacgtcgcaa
gatggcgtggccttcaaccgagtgtcctggtcaccgaatggggcgctgctgactgctggt
gatgacgctggcaagatatgggtttacgaattggcagagcaagtgtatcagcctcgacac
gacgagtggacgaagttagtgtacaccctgcaggagctccgtaacaaccaattggatgag
gagacggaccggctcagtgtgaccagtggaccgccttcccttggcagcctgacttcgctg
gccagcaacccgctcagataa
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