Pieris rapae (cabbage white): 111004127
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Entry
111004127 CDS
T05162
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111004127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prap03019
]
111004127
Messenger RNA biogenesis [BR:
prap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111004127
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111004127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
111004127
NCBI-ProteinID:
XP_022130681
LinkDB
All DBs
Position
4:complement(1067547..1086033)
Genome browser
AA seq
671 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWKKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLENRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSTWLVSSIDALNLQIDLFESEVESLVVGKKKRLDKEKQDRMDDLKSKLERHRYHIK
KLEMLLRMLDNMSVEVDQKSIPLQIKGIKEDVEYYISSSQDPGYEENEYIYEDIHGLDEI
ELSGAGVPSSATTDSNNSNDSPRSPTSMLSGTSPLTSPAELHNHTSESVDIDKKKKDDSI
KPVKPLPLRALSCGAAASPNLSALNHSATNNSVNSTGVSGTSTPIKQPPPSSPHQRPNNT
VVWSVAEVCENGPVSATPHQHPTAPAKSSSATTLASAIVNPNANVSVNTSTVSNVSTHSA
TPTPPSPVMLNGPINAHHTPQHMLNNGRASETPSTPALSTLSAASVSSGASAQPPDPLAT
TTLKSMAQEAVHRAGLQQNTRRGVPLSQAHIPPLLGVAPLGPLPLCSEQQVQYQLLETAF
YHMPHPSDSERTRVYLPRNICQTPAYYNQVLLPHSDTVEFFQRLSTETLFFVFYYMEGTK
AQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTF
EYKYLEDRDLN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaaactgcaaggtgaaatagacaggtgtttaaaaaaggtaacagaa
ggggttgaaacatttgaagatatttggaaaaaagtacataatgcgacgaacagtaatcaa
aaagaaaaatatgaggcggatctcaagaaagaaattaaaaaactccaaaggctacgagat
cagattaaatcatggattgcatcaggagaaattaaggataagagtactcttttagaaaat
aggaaactaatagaaacacaaatggaaaggtttaaagtggtcgaaagagaaacaaagaca
aaggcgtattcaaaagaaggtcttggtgcagctcagaaactcgacccagctcagaaggaa
cgggaggaaatgtcgacgtggcttgtgtcatctattgatgcgcttaatttacaaattgat
ctctttgaatctgaagtggaatcgctcgtagtgggaaagaagaaacggctggacaaggag
aaacaggatcggatggatgacctgaaatcgaaactggaacggcacaggtatcacattaag
aagctggagatgctgctgcggatgttggataacatgtctgtggaagttgatcaaaaatcg
atcccattacagataaagggtattaaggaggacgtggaatattatatatcgtcatctcag
gacccaggttatgaggagaacgagtacatctacgaagatattcacggcctggacgaaatc
gagttgagtggggccggagtgccatctagcgccaccacggatagcaacaatagcaatgac
tcacctagatctcccactagcatgctttcaggaacgagcccgttgacgtcgcctgcagag
ctacacaaccatacgtcggaatctgtcgatatcgataaaaagaagaaggacgactcaatc
aaacctgtaaagccgctaccgctccgcgccttatcgtgtggtgcggccgctagccccaac
ctgagcgcgctgaatcactccgctaccaacaatagtgtaaacagtacgggcgtgtctgga
acgtcgacgcccatcaaacagcctccgcccagttcacctcatcagcggcctaataatact
gttgtgtggtctgttgcagaggtgtgcgagaacggccccgtgtcagccacgccccaccag
caccccactgcgcccgcgaaaagttcatcagcgacgacgctcgcgagcgcgatcgtgaat
ccaaacgcgaacgtgagcgtgaatacgagtacggtcagcaacgtcagtacgcatagtgcc
acgcccacaccgccttcgccggtcatgctcaatggaccgatcaacgcccatcatacgcct
caacatatgctcaataacggtcgggcgagcgaaaccccaagcaccccagcgctgagtacg
ctgagtgcggcgagtgtaagtagcggcgctagtgcacagccgcctgacccacttgccact
accacgctcaagagcatggcgcaggaagccgtgcatcgggcgggtttacagcaaaataca
agacgaggtgtaccattatctcaggcgcatattccccctttattaggagttgcgccctta
gggcctctaccactttgttcggagcagcaagtgcagtaccagctgttagaaacagctttc
taccatatgccacacccctcagattcagagagaacgagggtatatctccctcgaaatatc
tgtcagacgcccgcctattataatcaggtgctgttaccccattcagacacagtggaattt
ttccagcgactctcaacagagacattattcttcgtgttctactacatggagggcacgaaa
gcccaataccttgccgcgaaagctctgaaaaaacagagttggcggttccacacgaaatac
atgatgtggttccaaaggcatgaagagcctaaggtcatcaatgaggaatatgaacagggc
acgtacatatactttgactacgagaagtggggccagcggaaaaaggaaggcttcacgttt
gagtacaagtacttagaagaccgtgacttgaactga
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